Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00237 ATGCTTATTGTATTTTTGTTTCTTCTGTTAATACAATTTTGTTTTCAGGCAGGATTGCCGATGCCGGATGTTTTATCTGTAAATTGTACATCACTGTCAAACACATCTGATATTTTTGCAAAGATACTTGGATTGCACAAAACTCTGGGGAAGAAGGGTTCAGGCACAGCCTTGCAGCAACTTCGGAATATGTATTCTCATGAATCGCGTACAAAGAACATGATATTGATTGTAGCAGATGAATTAGATTATCTAATAACCAAAGACAGAGCTGTGCTCCATGATCTTTTCATGCTTACCACTTTCCCGTTTTCCAGATGTATACTGATAGGTGTAGCTAATGCAATTGACCTAGCAGATCGATTTCTTCCAAGGCTTACTGCATTAAATTGCAAGCCTACTGTTGTAACTTTTCGAGCATACACAAAAGATCAGATCCTTAGAATTCTTAAAGAAAGACTAAATGAACTTCCTTACACTGTCTTCCAACCACAAGCATTAGAACTATGTGCTAGAAAAGTCGCCGCAGCTTCTGGAGATATGCGGAATGCTCTTTCCATATGCAGGAGTGCAATTGAGATGTTAGAAGCAGAAATTAGAGATTATGCTTCCAATTTGAATGCCTTAGAAGAGAAATCATCCTCGGAACAAAATCTTCCTACAGCACTGGATGTTGTGAAAAAACAAGAACTTGATATGGTAAGGATTGATCATATGGCTCTTGCCTTGTCCAAAACATATAGATCACCGGTGGTGGATACAATACAATCTCTGCCACATCATCAACAGATTATACTCTGCTCTACCATGAAACATTTCCGAGGAGCCAAGAAAGACTCAATCCTTGGTGAGTTATATAAATCTTATGCGGCGATATGCAAATCATCACTAATTCCCCCAGCTGGAATTATGGAATTTTCAAACATGTGCAGAGTGTTAAATGACCAGGGCCTTATAAAACTAGGACAATCCCGAGATGATAAATTGAGAAGAGTGACACCCAAATTAGACGAAGGAGATATTACTTTTGCATTGCAGGGGATCCGCTTTTTTTGA 1056 0.3864 MLIVFLFLLLIQFCFQAGLPMPDVLSVNCTSLSNTSDIFAKILGLHKTLGKKGSGTALQQLRNMYSHESRTKNMILIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTALNCKPTVVTFRAYTKDQILRILKERLNELPYTVFQPQALELCARKVAAASGDMRNALSICRSAIEMLEAEIRDYASNLNALEEKSSSEQNLPTALDVVKKQELDMVRIDHMALALSKTYRSPVVDTIQSLPHHQQIILCSTMKHFRGAKKDSILGELYKSYAAICKSSLIPPAGIMEFSNMCRVLNDQGLIKLGQSRDDKLRRVTPKLDEGDITFALQGIRFF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00237 351 Gene3D - 10 133 IPR027417 -
Vivi4g00237 351 Pfam CDC6, C terminal winged helix domain 266 344 IPR015163 -
Vivi4g00237 351 SUPERFAMILY "Winged helix" DNA-binding domain 251 348 IPR036390 -
Vivi4g00237 351 FunFam Cell division control protein 130 255 - -
Vivi4g00237 351 Pfam AAA lid domain 163 197 IPR041083 -
Vivi4g00237 351 Gene3D - 251 340 IPR036388 -
Vivi4g00237 351 FunFam Cell division control protein 258 348 - -
Vivi4g00237 351 Gene3D - 134 211 - -
Vivi4g00237 351 Coils Coil 192 212 - -
Vivi4g00237 351 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 17 351 - -
Vivi4g00237 351 CDD Cdc6_C 259 341 IPR015163 -
Vivi4g00237 351 SMART Cdc6_C_2 266 345 IPR015163 -
Vivi4g00237 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 200 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00237 Vivi-Chr4 5062334 5065177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00237 12 351 Core DNA Replication Machinery Family AT2G29680 61.159 6.40e-146 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00237 K02213 - gmx:100791200 550.436