Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00218 ATGGCTACTAAAAGATTCTTTGATGATTCTGATGATCAAGATCAAGATCATCCAAACGACAAAAGAATGAAACCTACTTTAGCTTCTGTAATTGAAAAAGCAGTAAAAATGCAAAACATGCAGAACCTTTTAGTAGGTTTGGAACCTTTTCTTAAAAGAGTGGTGAGTGAAGAGATGGATAAAGCAATAAGAAAGTCTTTTCCATGTTCCATTAATAGGTCACCTTCTTTAAGCATTCAAGCACCAAATGATCAACAATCAACCTTGCAACTCTCATTCAACCAAAAAGTTCCCCTCAAAATTTTCACAGGTTGTAGAATACTTGACATTGAAGGCAACCCAATGAGCATAATTCTTGTTGAAAAAACCAACAATAACCAAATTGTTCCAACTAGTCTTCCTTACCCTATAAAGCTAGAGATTGTGGTTCTAGATGGAGATTTTCCACTTGAAGAAAAAGAGAATTGGACTAGTGAGGAATTCAATGGAAAAATAGTGAAGGAAAGATCTGGGAAGAGACCATTACTTGCTGGAGAAATGAACCTTCCTATGAGAGATGGAGTTGCAGCAATTGGAGATATAGAATTCACTGATAATTCTAGCTGGATAAAGAGTAGAAAGTTTAGAGTTGCAGTGAAGGTTATTCATCATGGGAAAAATCAAAGTGTTAGAATTCAAGAAGCAATGACTGAGGCATTTGTTGTTATGGATCATCGAGGAGAATTATACAAAAAACACTACCCACCAATGCTTGATGATGAATTGTGGCGGCTAGAAAAAATAGGAAAAGATGGAGCTTTTCACACAAGAATGAATTCTGAAGGGATCAAAACAGTGCAAGACTTTCTCAAATTAGCTGTTGTTGATACTCATAAACTAAGAAAGATTTTGGGCGTTGGAATGTCAGATAAAATGTGGGAAGTGACATTTAAGCATGCAATGACTTGTGAGATGGGAAGCAAGATCTATATATACCGTGAACCTCAGCTTGTAATATTTCTGAATCCAATATGCAAATTAATTAAAGCTAATATCAATGGACATGAATTTTCCAGCAGAGGGTTGAGCCAAATCAATAAGAGCTATATAGACAAATTGGTTAAAGAAGCATACACAAAATGGGATGAGTTGGAGGAAATTGATGTGGTTTTAAATGATAACATTGCTTTGTTGAACCAAGGTGATCAAATTGTGGAACATTTTCCAAATAATAATCAAGGATCAGTAGTTACAACACATCATCAGAATATTGCTAGCTATGTACCAAGTAATAAAGCACAAATGGGAGGCTCTGAGTGGTTATTGAATCAAGCCTATGCCACAACATCATTTGCAAATGATTTCTCTTATGCCTTTTCAGGTTTACAATCAGATGGAGAAATTACACCTTCAGGTTCAGGTCTTAGCGACAATGATGGTGTCACAAGGCATCTTTAG 1437 0.3577 MATKRFFDDSDDQDQDHPNDKRMKPTLASVIEKAVKMQNMQNLLVGLEPFLKRVVSEEMDKAIRKSFPCSINRSPSLSIQAPNDQQSTLQLSFNQKVPLKIFTGCRILDIEGNPMSIILVEKTNNNQIVPTSLPYPIKLEIVVLDGDFPLEEKENWTSEEFNGKIVKERSGKRPLLAGEMNLPMRDGVAAIGDIEFTDNSSWIKSRKFRVAVKVIHHGKNQSVRIQEAMTEAFVVMDHRGELYKKHYPPMLDDELWRLEKIGKDGAFHTRMNSEGIKTVQDFLKLAVVDTHKLRKILGVGMSDKMWEVTFKHAMTCEMGSKIYIYREPQLVIFLNPICKLIKANINGHEFSSRGLSQINKSYIDKLVKEAYTKWDELEEIDVVLNDNIALLNQGDQIVEHFPNNNQGSVVTTHHQNIASYVPSNKAQMGGSEWLLNQAYATTSFANDFSYAFSGLQSDGEITPSGSGLSDNDGVTRHL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00218 478 Pfam Calmodulin binding protein C-terminal domain 321 380 IPR046829 -
Vivi4g00218 478 MobiDBLite consensus disorder prediction 1 23 - -
Vivi4g00218 478 Pfam Calmodulin binding protein-like N-terminal domain 89 238 IPR046831 -
Vivi4g00218 478 Pfam Calmodulin binding protein central domain 250 316 IPR046830 -
Vivi4g00218 478 PANTHER OS02G0177800 PROTEIN 1 448 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00218 Vivi-Chr4 3902550 3906009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00218 3 381 Calmodulin-binding Proteins AT5G57580 46.234 1.88e-109 336