Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00217 ATGCATAATATGCTTGCAGTTCATGTGAATATGGTCAACTCTTTGGAAAACAAATCAACTTTAACTGTTCATTGCAAATCTGCAGATGATGATCTAGGAGTTCATGTTCTACAACCTGGCGATAACTATGGTTTTAAGTTTGGTGTTAGCTTTATTGCAGTTACACAATTCTTTTGTGGATTTACCTGGAATGGTGTACTGCATTGGTTTGATATATACATAGACACTAGTTATAACAGATCTTATTGTAGTCATTGTAACTGGAACATTTATGAATCAGGACCATGTCGAACTCTAGAACCTAGGAAGATTGCTTGCTTTCCATGGAATAAGAATAAATAA 342 0.345 MHNMLAVHVNMVNSLENKSTLTVHCKSADDDLGVHVLQPGDNYGFKFGVSFIAVTQFFCGFTWNGVLHWFDIYIDTSYNRSYCSHCNWNIYESGPCRTLEPRKIACFPWNKNK 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00217 113 PANTHER - 7 98 IPR010264 -
Vivi4g00217 113 Pfam Plant self-incompatibility protein S1 8 109 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00217 Vivi-Chr4 3827118 3827459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00217 9 110 Carbohydrate Esterase AT3G16970 38.318 9.12e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00217 - - vvo:131594961 254.218