Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00154 ATGTTCACTTCCAGGAAGAAAATCAGCAAAGATAAGGGTGCTGAGCCAACTGAATTTGAAGAATCAGTTGGACAGGCGTTGTTCGATTTAGAGAATACCAACCATGAGCTCAAGAGTGAGCTAAAAGATTTATACATCAATTCCGCTGTCCAAGTTGATGTTTCCGGGAACCGCAAGGCTGTGCTTATCAATGTCCCCTACAGACTAAGGAAGGGTTTCCGTAAGATTCATGTTAGGCTTGTTCGTGAGCTTGAGAAGAAATTCAGTGGCAAGGATGTTATCCTGATTGCCACAAGGAGGATTGTAAGGCCTCCAAAGAAGGGCTCAGCAGCTCAGCGCCCCCGCAGCCGCACACTCACTGCTGTGCACGAGGCAATTCTTGAGGATGTTGTATTACCTGCTGAGATTGTTGGAAAACGCATTAGGTACCGAGTTGATGGGTCAAAGATCATGAAGGTGTTTTTGGACCCAAAGGAGAGAAACAACACAGAATACAAGTTGGAGACCTTTGCTGCAGTTTACAGGAAACTCTCAGGCAAAGATGTTGTTTTCGAGTACCCTGTTACTGAGGCTTAG 576 0.4566 MFTSRKKISKDKGAEPTEFEESVGQALFDLENTNHELKSELKDLYINSAVQVDVSGNRKAVLINVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRSRTLTAVHEAILEDVVLPAEIVGKRIRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPVTEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00154 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vivi4g00154 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vivi4g00154 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vivi4g00154 191 Coils Coil 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00154 Vivi-Chr4 2686963 2688841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00154 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 80.628 2.60e-116 326