Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00138 ATGGAAGTAACTCATGATAATGGGGTGAACTTTACAGCCCAAAGAGGGTTCGGAACAAAATTGAAATCTGGATTGAAAGAAACGTTTTTTCCGGATGATCCATTTAGACAAATTATGGAAGAGGGAAAACCGTCTCGTAGGTTGATTAAAGGGGTGCAATATTTTGTACCAATCTTTGAGTGGTTGCCGAATTATAATCTGAAGTTGTTTTTCTCTGACTTGATTGCTGGTCTCACCATTGCTAGCCTTGCCATTCCTCAGGGCATTAGTTATGCCAAACTCGCAAATCTTCCTCCTCTTATCGGCCTTTATTCAAGTTTTGTGCCACCATTAGTGTATGCTGTTTTTGGGAGTTCAAGGCACGTGGCAGTTGGAACAATAGCAGCTGCATCATTGCTAATTGGTGAAACAATATCATCTGTTGCTGACCATGTAAAAGAACCGGCATTGTATCTTCATTTGGTTTTTACAACAACTTTTGTCACTGGTGTTTTTCAGGCTTGTTTGGGTTTTTTCAGGCTTGGAATACTAGTTGATTTCTTCTCCCATTCTACCATTACTGGATTCATGGGAGGAACTGCAGTGATTCTCATCCTTCAACAATTAAAGGGTATTTTGGGATTGAAACATTTTTCAATCAAAACCAATGTTGTATCAGTGATAGAAGCCATCATCACCAATAGACATGAGATAAGATGGGAAACCACAGTTCTTGGAATAATCTTCCTTATTTTCTTGCAATTTACAAGGCACCTGAGGGTTAAAAATCCAAAACTCTTTTGGGTATCGGCTGTAGCTCCAATGACAACTGTAGTAGTTGGTGGACTTTTTACATATCTTGCCAATGGTCAAAATCATGGAATTCAAATTGTAGGGCATCTAGATAAAGGATTAAACCCTTGGTCAATTCAGTATTTGAATTTTGATAGTAGATATTTACCAGCAGTTTTGAAAGCAGGTTTAATCACTGGAGTTTTGTCATTAGCGGAAGGAATAGCCATTGGAAGAAGCTTTTCTGTTACTGATAATACACCTCATGATGGAAACAAAGAGATGATAGCTTTTGGACTCATGAATTTATTAGGTTCTTTTACATCATGTTACTTGACTAGTGGACCATTTTCCAAGACTGCCGTGAATTATAATGCAGGTTGTAAAAGTGCGATGACAAATGTGGTACAAGCAGTTTTATTGGCTCTCACACTGCTTTTTTTTGCACCATTATTTGGCCACACACCACTTGTTGCTCTATCTGCAATTATTGTGTCTGCAATGTTGGGGCTCATAAATTATGAGGAGGCTATATATCTCTTTAAGGTTGATAAGTTTGATTTTGTCATTTGTATGAGTGCATTCTTAGGTGTTGCCTTTATAAGCATGGATATGGGCCTTATGATCTCTGTTGGACTAGGTGTGCTTAGAGGACTACTATATTTGGCTAGACCTGCATCATGCAAACTTGGAAAGTTACCTGATTCCGGTATATACAGAGATGTTGAACATTATTCTAATGCTTCAACCGTTTCAGGAATTTTAGCTTTACAAATTGGTTCTCCTGTTTATTTTTCAAATTCTACTTACCTCAAAGAAAGGATTTTGAGATATGTTAAAAGTGAACAAAGCTCTTCTAGAGATAATGTGGAATATGTTATTCTGGATTTTACAGGAGTAAATTCCATTGACACTACTGGTATTGAAGGATTATTGGAGACAAATAAAGTGTTAGAAAGAAAAGGAATTCAGATGTCATTAGTAAATCCAAGGCTAGAGGTTATGGAGAAGCTAATACTATCAAAGTTTGTTGAAAAGATTGGGAAGGAAAAATTCTATCTAAATTTGGACGATGCAGTGATAGCAAGTCAATATTCATCAAGATCCAAGACAAATAATAATGAAGAGACAGTTTAA 1908 0.3679 MEVTHDNGVNFTAQRGFGTKLKSGLKETFFPDDPFRQIMEEGKPSRRLIKGVQYFVPIFEWLPNYNLKLFFSDLIAGLTIASLAIPQGISYAKLANLPPLIGLYSSFVPPLVYAVFGSSRHVAVGTIAAASLLIGETISSVADHVKEPALYLHLVFTTTFVTGVFQACLGFFRLGILVDFFSHSTITGFMGGTAVILILQQLKGILGLKHFSIKTNVVSVIEAIITNRHEIRWETTVLGIIFLIFLQFTRHLRVKNPKLFWVSAVAPMTTVVVGGLFTYLANGQNHGIQIVGHLDKGLNPWSIQYLNFDSRYLPAVLKAGLITGVLSLAEGIAIGRSFSVTDNTPHDGNKEMIAFGLMNLLGSFTSCYLTSGPFSKTAVNYNAGCKSAMTNVVQAVLLALTLLFFAPLFGHTPLVALSAIIVSAMLGLINYEEAIYLFKVDKFDFVICMSAFLGVAFISMDMGLMISVGLGVLRGLLYLARPASCKLGKLPDSGIYRDVEHYSNASTVSGILALQIGSPVYFSNSTYLKERILRYVKSEQSSSRDNVEYVILDFTGVNSIDTTGIEGLLETNKVLERKGIQMSLVNPRLEVMEKLILSKFVEKIGKEKFYLNLDDAVIASQYSSRSKTNNNEETV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00138 635 NCBIfam sulfate permease 57 616 IPR001902 GO:0016020|GO:0055085
Vivi4g00138 635 Gene3D STAS domain 481 623 IPR036513 -
Vivi4g00138 635 ProSiteProfiles STAS domain profile. 501 620 IPR002645 -
Vivi4g00138 635 CDD STAS_SulP_like_sulfate_transporter 502 613 - -
Vivi4g00138 635 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271|GO:0008272
Vivi4g00138 635 PANTHER SULFATE TRANSPORTER 19 627 IPR001902 GO:0016020|GO:0055085
Vivi4g00138 635 Pfam Sulfate permease family 70 450 IPR011547 GO:0016020
Vivi4g00138 635 Pfam STAS domain 502 616 IPR002645 -
Vivi4g00138 635 SUPERFAMILY SpoIIaa-like 505 617 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00138 Vivi-Chr4 2391493 2396211 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00138 7 623 Inorganic Solute Cotransporters AT5G19600 61.812 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00138 K17471 - gmx:100789107 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00138 4 2391493 2396211 Vivi4g00138 4 2391493 2396211 ECH