Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00137 ATGACGAAACTTGAACAAGAGATTCATCATAATGGGGTGAACTTATCAACCCGAAGAGGGTTCGGAACAAAGCTGAAATCCGGGCTGAAAGAAACGTTTTTTCCTGATGATCCTTTTCGACAGATTATGGAAGAGGAAAAACCGTCTCGTAGGTTGATTAAAGGGGTGCAGTATTTTGTTCCAATCTTTGAGTGGTTGCCGAATTATAATCTGAGGTTGTTTTTCTCTGACTTGATTGCTGGTCTCACCATTGCTAGCCTTGCCATTCCTCAAGGCATTAGTTATGCCAAACTCGCAAATCTTCCTCCTCTTGTTGGCCTTTATTCAAGTTTTGTGCCACCGTTAGTGTATGCTGTGTTTGGGAGTTCAAGGCACATGGCGGTTGGAACAATAGCAGCTGCATCATTGCTAATTGGTGACACAATATCAACTGTTGCTGACCCTATAAAAGAACCAACATTGTATCTTCATTTGATTTTTACAACAACTTTTGTCACTGGTGTTTTTCAGGCTTGTTTGGGTTTCTTCAGGCTTGGAATATTGGTTGATTTCTTTTCCCATTCTACCATTACTGGATTCATGGGTGGCACTGCAGTGATTCTCATCCTTCAACAACTGAAGGGTATTTTGGGATTGAAACATTTTTCAACCAAAACCAATCTTATATCAGTGATAGAAGCCATCTTCACCAATAGACATGAGATAAGATGGGAAACAACACTTCTTGGAATAATCTTCCTAATTTTCTTGCAATTTACAAGGCATCTGAGGGTTAAGAAACCAAAACTCTTTTGGGTATCTGCTATAGCTCCAATGACAACTGTAGTAGTTGGTGGTGTTTTTACATACCTTGTCAAAGGTCAAAATCATGGAATTCAAATTGTGGGGCATCTAGATAAAGGATTAAACCCTTGGTCCATTCAATATTTGAATTTTGATAGTAGATATTTATCAGCAGTGTTGAGAGCTGGCTTAATCACTGGAGTTTTGTCATTAGCGGAAGGAATAGCCATAGGAAGAAGCTTTTCTGTTACTGATAATACACCTCATGATGGAAACAAAGAGATGATAGCTTTTGGACTCATGAATTTATTTGGTTCTTTTACATCATGTTACTTGACTAGTGGACCATTTTCCAAGACTGCCGTGAATTATAATGCAGGGTGTAAGAGTGCAATGACAAATGTGGTACAAGCAGTTCTAATGGCCCTTACCCTACAATTTTTGGCACCACTATTTGGCAACACACCCCTTGTTGCTCTATCAGCTATTATTGTGTCCGCAATGTTAGGGCTCATAAATTATGAAGAAGCTATTTATCTCTTTAAAGTTGATAAATTCGATTTTGTCATTTGTATGAGTGCATTCTTGGGCGTCGCGTTTATAAGCATGGACATGGGCCTTATGATCTCTGTTGGACTAGGTGTGCTTAGAGGACTACTATATTTGGCTAGACCTGCATCATGCAAACTTGGAAAGTTACCTGATTCTGGTATATACAGAGATGTTGAACATTATTCGAATGCTTCAACCGTTCCAGGGATTTTAGCTTTACAAATTGGTTCTCCTGTTTACTTTTCAAATTCTACTTACCTCAAAGAAAGGATTTTGAGATATGTTAAAAGTGAACAAGGCTCTTCTGGAGATAACGTGGAACATGTTATACTAGATTTTACAGGAGTAAATTCCATTGACACAACTGGTATTGAAGGATTATTGGAGACAAATAAAGTGTTAAAAAGAAAAGGAATTCAGATGTCATTAGTAAACCCAAGGCTAGAGGTTATGGAGAAGCTAATACTATCAAAGTTTGTTGAAAAGATTGGAAAGGAAAAATTCTATCTAAATTTGGACGATGCAGTGATAGCAAGTCAATATTCATCAAGATCCAAGACAAATAATAATGAAGAGACAGTTTAA 1920 0.3776 MTKLEQEIHHNGVNLSTRRGFGTKLKSGLKETFFPDDPFRQIMEEEKPSRRLIKGVQYFVPIFEWLPNYNLRLFFSDLIAGLTIASLAIPQGISYAKLANLPPLVGLYSSFVPPLVYAVFGSSRHMAVGTIAAASLLIGDTISTVADPIKEPTLYLHLIFTTTFVTGVFQACLGFFRLGILVDFFSHSTITGFMGGTAVILILQQLKGILGLKHFSTKTNLISVIEAIFTNRHEIRWETTLLGIIFLIFLQFTRHLRVKKPKLFWVSAIAPMTTVVVGGVFTYLVKGQNHGIQIVGHLDKGLNPWSIQYLNFDSRYLSAVLRAGLITGVLSLAEGIAIGRSFSVTDNTPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKSAMTNVVQAVLMALTLQFLAPLFGNTPLVALSAIIVSAMLGLINYEEAIYLFKVDKFDFVICMSAFLGVAFISMDMGLMISVGLGVLRGLLYLARPASCKLGKLPDSGIYRDVEHYSNASTVPGILALQIGSPVYFSNSTYLKERILRYVKSEQGSSGDNVEHVILDFTGVNSIDTTGIEGLLETNKVLKRKGIQMSLVNPRLEVMEKLILSKFVEKIGKEKFYLNLDDAVIASQYSSRSKTNNNEETV 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00137 639 Pfam Sulfate permease family 74 454 IPR011547 GO:0016020
Vivi4g00137 639 CDD STAS_SulP_like_sulfate_transporter 506 617 - -
Vivi4g00137 639 ProSitePatterns SLC26A transporters signature. 103 124 IPR018045 GO:0008271|GO:0008272
Vivi4g00137 639 Gene3D STAS domain 485 627 IPR036513 -
Vivi4g00137 639 PANTHER SULFATE TRANSPORTER 23 631 IPR001902 GO:0016020|GO:0055085
Vivi4g00137 639 Pfam STAS domain 506 620 IPR002645 -
Vivi4g00137 639 SUPERFAMILY SpoIIaa-like 509 621 IPR036513 -
Vivi4g00137 639 ProSiteProfiles STAS domain profile. 505 624 IPR002645 -
Vivi4g00137 639 NCBIfam sulfate permease 61 620 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00137 Vivi-Chr4 2340838 2345045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00137 11 627 Inorganic Solute Cotransporters AT5G19600 62.298 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00137 K17471 - gmx:100789107 925.62