Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00130 ATGTCTTCTCTCTTCTCCAATGGCAAACCCAATTTCTCCATTGAAATTCCCACCATCAAGTTCACCAAACTCTTCATCAATGGACAATTTGTTGATTCTCTTTCAGGAAAAGAGTTTGAGACAATAGATCCAAGAACTGGAGAGGTGATAGCAAAGATTGCAGAGGGAAGAAAAGAAGACATTGATGTTGCTGTGAAGGCAGCACGTGTAGCTTTTGATGATGGTCCATGGCCTAGAATGCCCGGTGCGGAAAGAGCAAGAATCTTGCTGAAATGGGCAGAATTAATTGATCAAAACATAGAAGAAATAGCAGCATTAGACACCATAGATGCTGGAAAATTGTACAATTTCTGCAAAGCTGTTGACATACCTGGAGTAGCACACACTATACGTTACTACGCAGGTGCTGCTGATAAAATTCATGGAGAGGTTCTAAAACCTTCGCGCGAGTTGCACGCATATACTTTGATGGAACCTATTGGTGTTGTCGGACACATAATTCCTTGGAATTTTCCTAGTACCATGTTTGCTACTAAGGTTGCTCCGTCTTTAGCTGCTGGTTGTACTATGGTTCTTAAGCCGGCTGAACAAACACCTCTTTCGGCTTTGTTTTATGCTCATCTCGCTAAACAGGCTGGAATTCCGGATGGAGTACTCAATGTAGTACCGGGATTCGGTGCAACTGCGGGAGCTGCAATAAGTTCGCACATGGATATTGATAAGGTTAGTTTTACCGGTTCAACAGAAGTAGGACGCGAAATAATGATATCTGCAGCTAAAAGTAATTTGAAACCAGTTTCATTGGAGTTGGGAGGAAAATCACCTCTGTTGATTTTTGATGATGCTGATGTTGATAAGGCTGCTGAACTTGCTCTCATTGGCATCCTATTTAATAAGGGAGAAATTTGTGTTGCCGGTTCTCGTGTGTTTGTTCAAGAAGGAATCTATGATGAATTCGAAAAGAAGTTGGTGGAGAAAGCAAAAGCTTGGATCGTTGGTGATCCTTTTGATCCTAAAGCTCAACAAGGGCCTCAGGTTGACAAGAAGCAATTTGAAAAAATTCTTTCCTATATTGAAATAGGAAAGAAAGAAGGAGCAACCCTTTTGACAGGTGGTAAAAATATTGGAGACAAAGGTTACTATATTGAGCCTACAGTTTTCTCTAATGTTAAGGAGGACATGCTTATAGCACAAGATGAAATATTTGGACCTGTCATGGCACTCATGAAGTTCAAGACTATTGAGGAAGCGATTAAAAGTGCGAACAATACAAGATATGGTTTAGCAGCCGGAATTGTGACAAAGAATTTGGACATAGCAAACACTGTGTCGAGATCGATTCGTGCTGGAATTATTTGGATTAATTGTTACTTTGCATTTGGAAATGACATTCCTTATGGAGGTTACAAGATGAGTGGATTTGGAAGAGATTTTGGGTTGGAATCATTGCATAAGTATTTGCAAGTTAAATCTGTTGTTACTCCCATTTACAATTCTCCTTGGCTTTGA 1509 0.4016 MSSLFSNGKPNFSIEIPTIKFTKLFINGQFVDSLSGKEFETIDPRTGEVIAKIAEGRKEDIDVAVKAARVAFDDGPWPRMPGAERARILLKWAELIDQNIEEIAALDTIDAGKLYNFCKAVDIPGVAHTIRYYAGAADKIHGEVLKPSRELHAYTLMEPIGVVGHIIPWNFPSTMFATKVAPSLAAGCTMVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGATAGAAISSHMDIDKVSFTGSTEVGREIMISAAKSNLKPVSLELGGKSPLLIFDDADVDKAAELALIGILFNKGEICVAGSRVFVQEGIYDEFEKKLVEKAKAWIVGDPFDPKAQQGPQVDKKQFEKILSYIEIGKKEGATLLTGGKNIGDKGYYIEPTVFSNVKEDMLIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIWINCYFAFGNDIPYGGYKMSGFGRDFGLESLHKYLQVKSVVTPIYNSPWL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00130 502 SUPERFAMILY ALDH-like 16 498 IPR016161 GO:0016491
Vivi4g00130 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 8 492 - -
Vivi4g00130 502 FunFam Aldehyde dehydrogenase3 272 461 - -
Vivi4g00130 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620
Vivi4g00130 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
Vivi4g00130 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 490 IPR016162 GO:0016491
Vivi4g00130 502 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 26 289 - -
Vivi4g00130 502 FunFam Aldehyde dehydrogenase, putative 464 490 - -
Vivi4g00130 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
Vivi4g00130 502 Pfam Aldehyde dehydrogenase family 31 492 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00130 Vivi-Chr4 2279186 2285822 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00130 7 502 Aldehyde Dehydrogenase Gene Family AT3G24503 72.745 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00130 K12355 - gmx:100783920 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06353 5 170054970 170064555 Vivi4g00130 4 2279186 2285822 PCT