Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00119 ATGCCGCGATCAAGTTCGGGAGTTCATCATCAGCGTCAAAGCTCTGATAACTTCATCCTTGATGCAAATTATCAGGGAAGATGGTTTCATCCTTCAGCTTTTGCACATGAATTTGGAACGCGATCTTCGAGTTTGAGAAAGAGTGACGATGATAGCGTGTTCATGAGTGGCTTGCTTGATTTACATTCCTTTGATACTGAGCTTTTACCTGAGTGTTTTGATGACTCTGAGCCGATTTTCCCTGGAAACAAATTCGCACCAAGATCTCGGGGCTTGACTGAGAGCAATATTCTTAGAAGTTTCTCAGCTGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTTGCAGTTAGGAAGAGACCACTGAATAAGAAGGAAATAGCAAAGAAAGAGGAAGATATTATTACAATAAATTCAAATTCTCTCACAGTACACGAAAGAAAACTCAAGGTTGACTTGACAGAATACGTTGAGAAACACGGGTTCTTTTTTGATGCTGTGCTGGATGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTAGAGCCCATAGTTCCATTGATATTCCAACGAACTAAAGCAACTTGCTTTGCTTATGGCCAAACTGGGAGTGGGAAGACGTATACTATGCAACCATTGCCTCTCAAAGCATCCCAAGATATTTTAAGATTAATCCACCACACGTACCGGAGCCAAGGTTTCCAATTATACTTTAGTTTTTTCGAAATATATGGGGGGAAACTGTTTGATCTCCTCAATGATAGAAAAAAACTTTGCACGAGGGAGGATGGTAAACAGCAGGTTTGCATTGTTGGCTTGCAGGAATACAGAGTATTTGAAGTTGAAACAATCAAGCAATTTATTGAGAAAGGAAATTCTTCAAGAAGTACTGGTACAACCGGTGCAAATGAGGAATCATCTCGATCGCATGCTATACTTCAACTTGTTATCAAGAGATCAGCTGATGGGTCTGAATCAAAGCCCGCCCGAGTCATAGGCAAACTATCTTTCATAGATCTGGCTGGAAGTGAACGCGGTGCTGATACTATAGATAATGATAAGCAGACCAGGATTGAAGGGGCTGAAATTAATAAAAGCTTACTTGCACTGAAAGAATGCATTAGAGCCCTAGACAGTGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACTGAAGTTCTACGAGACTCTTTTGTTGGTGATTCACGGACTGTAATGATATCTTGCATTTCTCCAAGCTCAGGTTCATGTGAGCATACTCTCAACACATTAAGATATGCTGACAGGGTAAAGAGCTTGTCAAAGGGGAACAGCTCCAGAAAGGATTCACTTTCTTTATCCAACCTTAGAGACTCAGCTGTATTGCCGATTTTACCTCATGATGATACCTATGAAGATGAAATAACATATGTTTCCGGTGAGAGGAATCAATTTGGATGGTCCAAACAGTCTCAAAGAGAACCCTCACCTCCAAAGAAGATGGACCGTGTTGCAAGTGGTAGGAAAGAGGGAAATTTGGAACCATCTGTGTACTCTGACCGACAAAGAGGTATTCAATATGACAGAGCTGAGAAAGAAAATGATTACCTAATACCAACATATGGACAAGACAGAACAAGAAAAGCGAGCAAGAGGATAGATAACAACCAGTTATCTACTGTAGAAGACAAAAGGAAGATAGACTCTCGTGCTAAACATGCAAATCTATCAAATGTTGAGAATACATATTCTGATCACGATGATGATTTTAATGCTCTGCTGAAGGATGAGGAAGAACTTGTAACTGCTCACCGCAGACAAGTGGAGGAAACAGTAGATATTGTTAGGGAGGAGATGAATTTGCTCTTTGAAGCTGATCAACCAGGAAATCAATTGGATACTTATATTTCCAAATTGAATACCATTTTGTCTCAAAAGGCAGCAGGAATATTTCAATTGCAGACTCAGTTGGCTCAATTCCAGAGACGTTTAAATGAGTACAACTTTTTCTCATCCTCGGGTGACTGA 2016 0.4018 MPRSSSGVHHQRQSSDNFILDANYQGRWFHPSAFAHEFGTRSSSLRKSDDDSVFMSGLLDLHSFDTELLPECFDDSEPIFPGNKFAPRSRGLTESNILRSFSADKERANNVAKIKVAVRKRPLNKKEIAKKEEDIITINSNSLTVHERKLKVDLTEYVEKHGFFFDAVLDEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLIHHTYRSQGFQLYFSFFEIYGGKLFDLLNDRKKLCTREDGKQQVCIVGLQEYRVFEVETIKQFIEKGNSSRSTGTTGANEESSRSHAILQLVIKRSADGSESKPARVIGKLSFIDLAGSERGADTIDNDKQTRIEGAEINKSLLALKECIRALDSDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRKDSLSLSNLRDSAVLPILPHDDTYEDEITYVSGERNQFGWSKQSQREPSPPKKMDRVASGRKEGNLEPSVYSDRQRGIQYDRAEKENDYLIPTYGQDRTRKASKRIDNNQLSTVEDKRKIDSRAKHANLSNVENTYSDHDDDFNALLKDEEELVTAHRRQVEETVDIVREEMNLLFEADQPGNQLDTYISKLNTILSQKAAGIFQLQTQLAQFQRRLNEYNFFSSSGD 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00119 671 Gene3D Kinesin motor domain 93 439 IPR036961 -
Vivi4g00119 671 MobiDBLite consensus disorder prediction 478 517 - -
Vivi4g00119 671 PANTHER KINESIN-RELATED PROTEIN 6 32 666 IPR027640 GO:0003777|GO:0007018
Vivi4g00119 671 CDD KISc_KIF2_like 113 434 - -
Vivi4g00119 671 PRINTS Kinesin heavy chain signature 302 319 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi4g00119 671 PRINTS Kinesin heavy chain signature 386 407 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi4g00119 671 PRINTS Kinesin heavy chain signature 336 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi4g00119 671 PRINTS Kinesin heavy chain signature 193 214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi4g00119 671 Pfam Kinesin motor domain 119 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi4g00119 671 ProSitePatterns Kinesin motor domain signature. 335 346 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vivi4g00119 671 MobiDBLite consensus disorder prediction 491 505 - -
Vivi4g00119 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 436 IPR027417 -
Vivi4g00119 671 FunFam Kinesin-like protein 94 439 - -
Vivi4g00119 671 ProSiteProfiles Kinesin motor domain profile. 113 436 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi4g00119 671 SMART kinesin_4 111 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00119 Vivi-Chr4 1967139 1974258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00119 112 436 Calmodulin-binding Proteins AT5G65930 35.821 7.59e-44 168