Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00081 ATGGTATTGCTAATTGCACTCGCATTGCTTATTGGTGTTGTTATTGTTCTTCTTCTTTTCAACCCAACACACCATAAATCTGGACAAAAGGGAAAAGCTGGTTCCACCTCAAACAATGATAAGACATCAAAATCCTATAGTAAAAATGAAGTCACATTGCATAACACGAGAACAGATTGCTGGATAATCATCAAGAACAAGGTATACGATGTCACCTCATATGTGGAAGAACATCCAGGTGGTGATGCCATTCTAGCACATGCTGGAGATGATTCAACCGAAGGATTTTTCGGGCCACAACATGCAACTCGGGTCTTTGACATGATTGAGGATTTCTACATTGGAGACTTGGACCAATAA 360 0.4 MVLLIALALLIGVVIVLLLFNPTHHKSGQKGKAGSTSNNDKTSKSYSKNEVTLHNTRTDCWIIIKNKVYDVTSYVEEHPGGDAILAHAGDDSTEGFFGPQHATRVFDMIEDFYIGDLDQ 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00081 119 PANTHER CYTOCHROME B5 30 117 - -
Vivi4g00081 119 FunFam Sulfite oxidase, mitochondrial 41 119 - -
Vivi4g00081 119 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 43 118 IPR001199 -
Vivi4g00081 119 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 74 81 IPR018506 GO:0020037
Vivi4g00081 119 Pfam Cytochrome b5-like Heme/Steroid binding domain 48 117 IPR001199 -
Vivi4g00081 119 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 41 118 IPR036400 -
Vivi4g00081 119 Gene3D - 36 119 IPR036400 -
Vivi4g00081 119 PRINTS Cytochrome B5 signature 105 117 IPR001199 -
Vivi4g00081 119 PRINTS Cytochrome B5 signature 68 78 IPR001199 -
Vivi4g00081 119 PRINTS Cytochrome B5 signature 78 92 IPR001199 -
Vivi4g00081 119 MobiDBLite consensus disorder prediction 28 49 - -
Vivi4g00081 119 MobiDBLite consensus disorder prediction 25 49 - -
Vivi4g00081 119 SMART Cyt_b5_2 46 118 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00081 Vivi-Chr4 857749 859976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00081 3 117 NADPH P450 reductases AT1G60660 60.000 7.04e-48 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00081 - - gmx:100527821 189.889