Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00070 ATGGGAAACAAAATCGCGCGCACGACGCAAGTTTCCGCGTCGGAGTATTACCTCCACGAGTTACCGTCGACCTACAATTTGGTACTGAAAGAAGTTCTTGGACGCGGCCGCTTCTTCAAATCGATTCAGTGTAAGCACGACGAAGGTTTGGTTCTTGTTAAGGTTTATTTCAAACGCGGCGATTCCATTGATCTTTCCGATTATGAACGACGTCTCAATCAGATTAAGGATATTTTTAGCAGTATTGATCATCCTCATGTTTGGCCTTTTCAGTTTTGGCAAGAAACAGATAAAGCAGCTTATCTTTTGAGGCAATATTTCTTCCATAATTTGCATGATCGATTAAGCACTCGACCTTTTCTTAGTTTTGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTTTAGCTGTAAAACAGAGCCACGAGAAGGGAGTGTGTCATGGTGATATCAAGTGTGAAAATGTGCTAATTACATCCTCAAATTGGCTTTACCTTGCTGATTTTGCATCTTTTAAACCCACTTATATTCCGTATGATGACCCATCCGATTTCTCTTTTTTCTTTGACACGGGTGGAAGAAGACTCTGTTATCTGGCGCCTGAGAGGTTTTATGAAAATGGAGGGGAGATGCAGATGGCGCATGATACCCCCTTAAAGCCATCAATGGATTTATTTGCTGTCGGGTGTGTAATTGCTGAACTTTTCCTCGAGGGCCAACCACTTTTTGAACTGTCTCAACTTCTTGCGTATCGCAGAGGGCAATACGATCCAAGTCAACATCTTGAAAAAATACCAGATATTGGAATCCGTAAGATGATTCAGCACATGATTCAGTTAGAGCCAGAGTCTCGATTTTCTGCTGAAGGATATCTAAAGGAATATGCTGGAATTGTATTCCCTACCTATTTTTCACCATTTCTGCATGATTTTTACCGTTGCTGGAGTCCTCTCCATTCTGATATGAGGGTTTTACTATGTCAGAGTGCTTTCCAGGAGATACTTAAACAAATGATGAACAAGCAGTCATCTGATGATGCAGGTGTAACTTCTGGAGAGCTTTTGGAAGAGATGGTTGCCAAAGAAAGCGTGAGTTTCATGAAGGACACACAAAGGAAAAGAGAAGACGTAGGCAAAGGCTTAGTTCATGATCATTATGAACTTCTTGGTGATATTAATGGCCTACTGAGGGATGCTAAAAATAATAATAAAAATCCATCCGGTCCTCAGCAAGTAACAGGGAATGCACAAGATTCTACCTTTCCTGAAAATCTAAAAAGTTTGCAGTCTCCTGGTGAGCTGCTTCAAACTATCTCCAATACATTTCGAGGAAATGATCATCCCTTTTTGAAAAGTATTACTATGAAAGACTTAAATTCACTGATGTCTGAGTATGACAGTCAGTCAGATACATTTGGAACGCCTTTTCTACCATTACCCAATGATACTATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTGTGCTCCTGCATACGCAATGTCAAGTTGCCTCACCTGAGGAGGGCAGCTGTACTCTTGTTGAAGGCGTCTGCCCTATATATTGATGATGAAGATCGTTTGCAGCGTGTTATCCCATATGTGATTGTAATGCTTTCTGATTCAGCAGCAATTGTGCGCTGCGCTGCTTTGGAGACTTTGTGTGACATTCTTCCCATAGTGCGGGATTTCCCTCCCAGTGATGCAAAGATATTTCCTGAGTATATTTTTCCTATGCTTTCTATGCTTCCTGATGACCCTGAGGAAAGTGTTAGGATATGCTATGCCAGCAATATAGCTAAGCTGGCACTCACTGCTTATGGATTTTTGATACACTCAATGAGCTTGAGTGAGGCAGGTGTCCTTGATGAACTGAGTTTGCCACAGAAGCCATTGACATCACCTACTCAGACATCTGGGAGAATGAAGATGATAAATAGTGATGTCCAGCTTCTGCAGCTGAGAAAATCAATTGCAGAGGTTGTTCAAGAACTTGTTATGGGTCCAAAGCAAACACCGAATATTAGAAGAGCACTTCTTCAGGACATCGGTAAACTTTGCTACTTCTTTGGTGTGAGACAAAGTAATGACACACTCTTACCTATCCTTCCTGCCTTCTTAAATGACCGAGATGAGCAATTAAGAACAGTGTTCTATGAAAAGATTGTTTATGTCTGCTTTTTTGTGGGCCAAAGAAGTGTAGAGGAATATCTGTTACCTTACATTGAGCAAGCTTTGAGTGACATGACAGAAGCTGTCATTGTTAGAGCCTTAGAATGTTTAACTATTCTTTGCAAAAATGGGTTCTTCCGGAAGAGGATATTACTTCAAATGATTGAGCGTGCCTTTGCTTTATTGTGCTATCCTAGTGAATGGGTACGAAGATCAGTTGTCTCTTTCATTTCTGCTAGCAGTGAGAGCCTGGGTGCAGTGGATTCTTATGTTTTCCTTGCTCCTGTTATACGTCCTTTCCTTCGTAGACAACCCGTGTCTCTTGCTTCAGAGAAAGCTCTTTTGTCATGTTTAAAACCTCCTGTCTCAAGACAGGTTTTCTATGAAGTCTTGGAGAGCTCCAGGAGTTCTGACATGTTAGAAAGACAGAGAAAGATATGGTATAGCTCATCACAGTCTAAAATATGGGAAATGGATTTACTTAAAAAAGGAATGGATGAGTTGGACTCGTTAAAGAGCTGGGCTGAGAAGCAACAAGGTTCTGGGGTTCAACAAACTATTGGAACTTCCCTCCCACAGCCAGGGCTAACTGATTGTGACAAAGCCGAGTCTAAATTAAGAGATATGGGGGCCTTTATGCATACTGATAGCAATATGGGGGGACATCGTGATCCCCAATGCTCGGAGAAGTTACAGTTTTCAGGATTTATGTCACCAACCTTTAGTGGTGTAAGCAGTTTGACATATGACAAGCCATCAGAGGGCATACCTTTATATTCATTCGGTATGGACAGGAGAGGAATGGGTATACCTCCTGCAGCATCTGATTCTCCATTACAAATGAATTCTCTGGGTGTTAGTTCATCTGCAATGCCTTGGGTTAATCCTCTTAGTAAGTCCTTTAATCTGGCCAATTCAGTTCCAGCACCAAAGCTTTTTTCAGGTTCGTTTAGCACCAGCAATGGTTCTAAACAGTTCCACCGAGTGGTACATGAACCGGATCCCAAGGAAAGTGAAACAGCTTTTGTCAATAGCACATTTCAAGATTTGGGACTATCTTCTAATAATAAAGGTGCATCAATTTCACTTGAAGAAGCTACTGCCCAAGCTGATTTATCAGGATTTCAATCTTTTGCTCGGACATCCATCCCTGATTCTGGTTGGAGGCCGCGTGGGGTGTTGGTTGCGCACCTCCAGGAGCACCGTTCAGCAGTGAGTGACATAGCAGTTTCTTCTGATCACAGCTTTTTTGTGAGTGCATCAGATGACTCTACAGTCAAGATTTGGGATTCCAAAAGGTTAGAAAAAGACATTTCATTCAGGTCAAAGCTAACTTATCACCTAGAGGGAAGCCGTGCGTTATGTGTAGCAATGCTTCCAGGATCAGCGCGAGTGATAGCTGGAGCATCTGATGGGTTTATTCATATGTTTTCCGTTGATCATATCTCTAGAGGACTAGGAAATGTTGTTGAGAAGTACTCTGGGATTGCTGATATCACAAAGAAGGATACCAAAGAAGGTGCCATACTCGGCCTTTTAAATTGCCCTACAGATAATAATAGCATTATGTATAGCACCCAGAACTGTGGCATTCATCTATGGGATACAAGATCAAATTCCAATTCTTGGACGCTGAAGGCTCCTCCCGAGGAGGGCTACGCCTTGGCCCTAGCATCAGGGTCTTGTTCCAACTGGTTTGTATCAGGGTCGTCCAGGGGTGTAATTACACTTTGGGATCTGAGATTTCGTGTACCTGTAAACTCTTGGAAGTATTCTCCTGCTTGTCCTATAGAAAAGATTTGTCTCTTCCTTCCTCCTTCAAATGCTTCTCTATCTTCAACCACTAGGCCCCTTGTTTATGTGGCTGCGGGATGCAATGAAGTTTCTCTTTGGAATGCAGAAAATGCTAGCTGCCACCAGGTACTGAGGATGGCCAATTATGACAGTGATGCAGAAATGTCCGATATGCCTTGGGCCTTGGCCAAACCATCTAGTAAACCAACTTCTCAGTCAGATCCAAGACGAAATATTAATCGCAAGTATAGAGTTGATGAGCTAAATGAACCTCCTCCCCGTCTTCCTGGTATTCGCACATTACTTCCCTTACCAGGGGGTGATTTATTGACTGGTGGCACTGATTTAAAGATACGTCGATGGGATCATTACAGTCCTGACAGAAGCTACTGCATTTGTGGACCAAGCCTAAAGGGAGGTGGAAATGATGACTTTTACGAAACAAAATCTAGTTTTGGAGTGCAAGTTGTACAGGAGACAAAGAGACGTCCTCTTGCAGCCAAGCTGACACCAAAGGCAATTCTTGCAGCTGCTGCTACTGATTCTGCCGGTTGTCATCGTGATTCTGTAGTTTCTGTGGCTTCGGTTAAGTTAAATCAGAGACTTCTACTTTCAAGTGGTAGAGATGGGGCCATCAAGGTTTGGAAGTAA 4617 0.4243 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDSIDLSDYERRLNQIKDIFSSIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYENGGEMQMAHDTPLKPSMDLFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDIGIRKMIQHMIQLEPESRFSAEGYLKEYAGIVFPTYFSPFLHDFYRCWSPLHSDMRVLLCQSAFQEILKQMMNKQSSDDAGVTSGELLEEMVAKESVSFMKDTQRKREDVGKGLVHDHYELLGDINGLLRDAKNNNKNPSGPQQVTGNAQDSTFPENLKSLQSPGELLQTISNTFRGNDHPFLKSITMKDLNSLMSEYDSQSDTFGTPFLPLPNDTMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIVMLSDSAAIVRCAALETLCDILPIVRDFPPSDAKIFPEYIFPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSMSLSEAGVLDELSLPQKPLTSPTQTSGRMKMINSDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGVRQSNDTLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDMTEAVIVRALECLTILCKNGFFRKRILLQMIERAFALLCYPSEWVRRSVVSFISASSESLGAVDSYVFLAPVIRPFLRRQPVSLASEKALLSCLKPPVSRQVFYEVLESSRSSDMLERQRKIWYSSSQSKIWEMDLLKKGMDELDSLKSWAEKQQGSGVQQTIGTSLPQPGLTDCDKAESKLRDMGAFMHTDSNMGGHRDPQCSEKLQFSGFMSPTFSGVSSLTYDKPSEGIPLYSFGMDRRGMGIPPAASDSPLQMNSLGVSSSAMPWVNPLSKSFNLANSVPAPKLFSGSFSTSNGSKQFHRVVHEPDPKESETAFVNSTFQDLGLSSNNKGASISLEEATAQADLSGFQSFARTSIPDSGWRPRGVLVAHLQEHRSAVSDIAVSSDHSFFVSASDDSTVKIWDSKRLEKDISFRSKLTYHLEGSRALCVAMLPGSARVIAGASDGFIHMFSVDHISRGLGNVVEKYSGIADITKKDTKEGAILGLLNCPTDNNSIMYSTQNCGIHLWDTRSNSNSWTLKAPPEEGYALALASGSCSNWFVSGSSRGVITLWDLRFRVPVNSWKYSPACPIEKICLFLPPSNASLSSTTRPLVYVAAGCNEVSLWNAENASCHQVLRMANYDSDAEMSDMPWALAKPSSKPTSQSDPRRNINRKYRVDELNEPPPRLPGIRTLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPSLKGGGNDDFYETKSSFGVQVVQETKRRPLAAKLTPKAILAAAATDSAGCHRDSVVSVASVKLNQRLLLSSGRDGAIKVWK 1538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00070 1538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Vivi4g00070 1538 Gene3D Transferase(Phosphotransferase) domain 1 21 375 - -
Vivi4g00070 1538 Gene3D - 477 616 IPR011989 -
Vivi4g00070 1538 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00070 1538 Pfam WD domain, G-beta repeat 1118 1154 IPR001680 GO:0005515
Vivi4g00070 1538 Pfam HEAT repeat 531 560 IPR000357 GO:0005515
Vivi4g00070 1538 CDD STKc_Vps15 16 303 - -
Vivi4g00070 1538 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00070 1538 FunFam Protein kinase family protein / WD-40 repeat family protein 24 347 - -
Vivi4g00070 1538 SUPERFAMILY Protein kinase-like (PK-like) 26 319 IPR011009 -
Vivi4g00070 1538 MobiDBLite consensus disorder prediction 397 423 - -
Vivi4g00070 1538 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1505 1538 - -
Vivi4g00070 1538 ProSiteProfiles HEAT repeat profile. 699 737 IPR021133 -
Vivi4g00070 1538 SUPERFAMILY WD40 repeat-like 1119 1536 IPR036322 GO:0005515
Vivi4g00070 1538 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 477 616 - -
Vivi4g00070 1538 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1122 1154 - -
Vivi4g00070 1538 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1538 IPR045162 GO:0004674|GO:0016236|GO:0045324
Vivi4g00070 1538 Gene3D - 1068 1205 IPR015943 GO:0005515
Vivi4g00070 1538 ProSiteProfiles Trp-Asp (WD) repeats profile. 1122 1154 IPR001680 GO:0005515
Vivi4g00070 1538 ProSiteProfiles Trp-Asp (WD) repeats profile. 1505 1538 IPR001680 GO:0005515
Vivi4g00070 1538 SMART WD40_4 1262 1303 IPR001680 GO:0005515
Vivi4g00070 1538 SMART WD40_4 1410 1444 IPR001680 GO:0005515
Vivi4g00070 1538 SMART WD40_4 1490 1538 IPR001680 GO:0005515
Vivi4g00070 1538 SMART WD40_4 1115 1154 IPR001680 GO:0005515
Vivi4g00070 1538 SMART WD40_4 1165 1202 IPR001680 GO:0005515
Vivi4g00070 1538 Gene3D - 1211 1538 IPR015943 GO:0005515
Vivi4g00070 1538 Gene3D - 617 843 IPR011989 -
Vivi4g00070 1538 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00070 1538 SUPERFAMILY ARM repeat 431 826 IPR016024 -
Vivi4g00070 1538 FunFam Protein kinase family protein / WD-40 repeat family protein 627 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00070 Vivi-Chr4 666777 675565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00070 29 293 MAP Kinase Gene Family AT2G01450 25.490 8.52e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Vivi4g00070 Pkinase 4.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00070 K08333 - gmx:100818467 2739.53