Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00065 ATGAAGACAAAAACCCCATTGAAGCAGCTCAAGCTCTCTGTTCCAGCTCAAGAAACACCCATCACCTCATTCCTGACTGCTAGTGGTACATTCCATGATGGAGATCTGCTTTTGAATCAGAAAGGAATGCGTCTCATTTCTGAAGAAAAGGAATCAAGGGTCATTCAGATGAATATACAAGAGGATATTCGGAAACAGATTGTTCAGGAACTGAAAATAAACCAAGCATCACAGTGTCCACATGTTGTAGTTTGTTACCATTCATTCTATCATAATGGTGTTATATCTCTTGTACTGGAATACATGGATCGCGGTTCTCTAGTAGATATAATCAGACAAGTTAATACAATTCTGGAACCATATCTTGCTGTGGTTTGTAAGCAGGTGTTACAGGGCCTTGTTTACTTGCACAATGAAAGACATGTGATACATAGAGACATCAAACCATCCAATCTTTTAGTAAATCACAAAGGGGAAGTGAAGATTACTGATTTCGGTGTTAGTGCTATGCTCGCTAGCTCAATGGGCCAAAGAGATACATTTGTTGGAACTTATAATTACATGTCGCCAGAAAGAATCAGCGGAAGTACTTACGGTTACAGCTGTGACATCTGGAGTTTAGGGATGGTAGTACTCGAGTGTGCCATAGGACGGTTTCCTTATATACAATCTGAAGATCAGCAAGCCTGGCCTAGTTTCTATGAACTTTTGCAAGCAATTGTCGAAAGTCCACCGCCTTCTGCTCCTCCTGATCAGTTCTCCCCGGAATTTTGTTCATTTGTGTCATCCTGCATAAAGAAGGATCCTCGCGAAAGATCAACATCATTGGAGCTTTTGGATCATCCTTTCATAAAAAAGTTTGAAGATAAAGATCTAGATCTTGGAATATTAGTAGGTAGCTTGGAACCTCCTGTAAATTTTCCCAGATGA 930 0.4022 MKTKTPLKQLKLSVPAQETPITSFLTASGTFHDGDLLLNQKGMRLISEEKESRVIQMNIQEDIRKQIVQELKINQASQCPHVVVCYHSFYHNGVISLVLEYMDRGSLVDIIRQVNTILEPYLAVVCKQVLQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYGYSCDIWSLGMVVLECAIGRFPYIQSEDQQAWPSFYELLQAIVESPPPSAPPDQFSPEFCSFVSSCIKKDPRERSTSLELLDHPFIKKFEDKDLDLGILVGSLEPPVNFPR 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00065 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Vivi4g00065 309 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00065 309 CDD PKc_MAPKK_plant_like 54 288 - -
Vivi4g00065 309 SMART serkin_6 31 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00065 309 Gene3D Transferase(Phosphotransferase) domain 1 105 298 - -
Vivi4g00065 309 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 54 286 - -
Vivi4g00065 309 FunFam Mitogen-activated protein kinase kinase 6 105 303 - -
Vivi4g00065 309 Gene3D Phosphorylase Kinase; domain 1 51 103 - -
Vivi4g00065 309 Pfam Protein kinase domain 58 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00065 309 SUPERFAMILY Protein kinase-like (PK-like) 59 299 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00065 Vivi-Chr4 628190 631944 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00065 1 309 MAP Kinase Kinase Gene Family AT5G56580 74.930 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Vivi4g00065 Pkinase 3.6e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00065 K04368 - gmx:100786284 571.622