Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00015 ATGGGTCGCCGAAAAACCAACAATCAAACCAACAACAACACAAACATGGCCACCAACAACGACAACAACCATCTTCGATTCCAGGACGCTGATGAAGTTATCGCAGATGCTGCTGAAACTTCTAACCTTGACCAATCCATGGGTGGTTGCGAACTTGACGATTCTAATGACAAAACCAGCGCTGATTACTACTTTGATTCTTACTCTCACTTTGGAATTCATGAAGAAATGTTGAAGGACACTGTTAGAACCAAGACATATCAAAATGTTATTTATCAGAATAGGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTCGGTGCCGGAACTGGGATTTTGTCACTATTCTGTGCCAAAGCAGGTGCAGAACATGTCTATGCCGTTGAATGCTCTGATATGGCTGACATGGCAAAGCAGATAGTTGAAACTAACGGTTACTCTAAAGTTATAACAGTTTTGAAAGGGAAGATTGAAGAACTTGAACTTCCTGTTCCTAAAGTTGATATAATCATTTCCGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTACTCTATGCACGTGATAAATGGCTTGTTGATGATGGAGTTATTCTACCCGATATTGCTTCCCTCTATCTTACCGCAATTGAAGATAAAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCTTGACAGAGCCTCTTGTTGACACAGTTGACCAGAATCAGCTTGTAACAAACAGTCAGTTACTCAAGACAATGGACATCTCCAAAATGTCTGCAGGAGATTGTTCATTCACAGCACCTTTTAAGCTTGTAGCTAATCACGACGATTTTATTCACGCTCTCGTGGCATATTTTGATGTATCATTTACAAGGTGTCATAAATTGATGGGCTTCTCAACAGGGCCAAAATCGCGAGGTACACATTGGAAACAGACAGTCCTATATCTGGAAGATGTGTTGACCATTTGTGAAGGGGAGACAATTGTAGGGAGCTTGACAGTTGCCCCGAATAAAAAGAATCCCCGTGATGTTGATATAATGCTCAAGTATACATTGAATGGCAGGCGATGCAATGCTTCGAGGGTTCAGTATTACAAGATGCGTTAA 1149 0.3969 MGRRKTNNQTNNNTNMATNNDNNHLRFQDADEVIADAAETSNLDQSMGGCELDDSNDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNRFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSDMADMAKQIVETNGYSKVITVLKGKIEELELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLVDDGVILPDIASLYLTAIEDKDYKEDKIEFWNNVYGFDMSCIKKQALTEPLVDTVDQNQLVTNSQLLKTMDISKMSAGDCSFTAPFKLVANHDDFIHALVAYFDVSFTRCHKLMGFSTGPKSRGTHWKQTVLYLEDVLTICEGETIVGSLTVAPNKKNPRDVDIMLKYTLNGRRCNASRVQYYKMR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00015 382 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 61 362 IPR025799 GO:0016274|GO:0018216
Vivi4g00015 382 Gene3D Vaccinia Virus protein VP39 52 204 IPR029063 -
Vivi4g00015 382 CDD AdoMet_MTases 103 203 - -
Vivi4g00015 382 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 24 369 IPR025799 GO:0016274|GO:0018216
Vivi4g00015 382 FunFam Blast:Protein arginine N-methyltransferase 1 206 382 - -
Vivi4g00015 382 FunFam probable protein arginine N-methyltransferase 1 52 204 - -
Vivi4g00015 382 Gene3D - 207 382 - -
Vivi4g00015 382 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 67 381 IPR029063 -
Vivi4g00015 382 MobiDBLite consensus disorder prediction 1 23 - -
Vivi4g00015 382 Pfam Ribosomal protein L11 methyltransferase (PrmA) 98 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00015 Vivi-Chr4 177110 180154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00015 11 344 C2H2 Transcription Factor Family AT3G12270 36.798 6.85e-67 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00015 K11434 - gmx:100781777 641.728