Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00006 ATGGAAAACATTAAAGATCCATCAATCTACCGCAACCCAGTCATATTGCAGAGTGAGGACTTGACAAATTATATATTAGAGACTGCTGTTTACCCTAGAGAGCCGGAGCCTCTCAAAGAGCTGAGGAAAGCCTCTGAGACTCACCCTTGGGGTTTCATAGCTACTTTACCTGAGGCTGGTCCACTAATGACTATACTTTTGAAGCTTTTGAATCCCAAAAAGACAATTGAAGTGGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTTAATATTCCTCATGATGGAAAGATTACAGCCATAGACATTGACAGGAAAACTTATGAAATTGGATTACCGGTGATAAGAAAGGCTGGAATGGAACACAAGATTGATTTCATTGAGTCTCCAGCTCTACCAATTTTGGATAAACTGCTAGAAGATCCATCAAATGAAGGAAATTTTGACTATGCTTACGTTGATGCTGACAAAAATAACTATGTAAATTACCATGAAAGACTGATAAAACTAGTCAAAGTTGGTGGCTTACTTATATATGACAACACTCTTTGGGGTGGAAGAGTTGCATGGCCTGAAGAAAAAGTTCCACCACATGCCAAAGTAGGAAGAACAGCAGCAATTGAATTCAACAAAGCAATCAGAGATGACTCTCGTGTTGATTTTTCTCTCAGTTCTGTTGGTGATGGACTCACTATTTGTAGGCGTATTGTCTAA 717 0.3933 MENIKDPSIYRNPVILQSEDLTNYILETAVYPREPEPLKELRKASETHPWGFIATLPEAGPLMTILLKLLNPKKTIEVGVFTGYSLLLTALNIPHDGKITAIDIDRKTYEIGLPVIRKAGMEHKIDFIESPALPILDKLLEDPSNEGNFDYAYVDADKNNYVNYHERLIKLVKVGGLLIYDNTLWGGRVAWPEEKVPPHAKVGRTAAIEFNKAIRDDSRVDFSLSSVGDGLTICRRIV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00006 238 Pfam O-methyltransferase 28 237 IPR002935 GO:0008171
Vivi4g00006 238 CDD AdoMet_MTases 76 180 - -
Vivi4g00006 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Vivi4g00006 238 Gene3D Vaccinia Virus protein VP39 8 238 IPR029063 -
Vivi4g00006 238 PANTHER O-METHYLTRANSFERASE-RELATED 12 237 - -
Vivi4g00006 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00006 Vivi-Chr4 118575 120330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00006 15 237 Monolignol Biosynthesis Gene Families AT4G26220 61.883 1.55e-100 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00006 K00588 - gmx:100800911 431.024