Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00005 ATGTTTTCAAAATTGGATCAGTGGTTGAACCGGGGTTTCATAGCTACTTTACCTGAGGCTGGTCCACTAATGACTATACTTTTGAAGCTTTTGAATCCCAAAAAGACAATTGAAGTGGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTTAATATTCCTCATGATGGAAAGATTACAGCCATAGACATTGACAGGAAAACTTATGAAATTGGATTACCGGTGATAAGAAAGGCTGGAATGGAACACAAGATTGATTTCATTGAGTCTCCAGCTCTACCAATTTTGGATAAACTGCTAGAAGATCCATCAAATGAAGGAAATTTTGACTATGCTTACGTTGATGCTGACAAAAATAACTATGTAAATTACCATGAAAGACTGATAAAACTAGTCAAAGTTGGTGGCTTACTTATATATGACAACACTCTTTGGGGTGGAAGAGTTGCATGGCCTGAAGAAAAAGTTCCACCACATGCCAAAGTAGGAAGAACAGCAGCAATTGAATTCAACAAAGCAATCAGAGATGACTCTCGTGTTGATTTTTCTCTCAGTTCTGTTGGTGATGGACTCACTATTTGTAGGCGTATTGTCTAA 600 0.38 MFSKLDQWLNRGFIATLPEAGPLMTILLKLLNPKKTIEVGVFTGYSLLLTALNIPHDGKITAIDIDRKTYEIGLPVIRKAGMEHKIDFIESPALPILDKLLEDPSNEGNFDYAYVDADKNNYVNYHERLIKLVKVGGLLIYDNTLWGGRVAWPEEKVPPHAKVGRTAAIEFNKAIRDDSRVDFSLSSVGDGLTICRRIV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00005 199 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 198 IPR002935 GO:0008171
Vivi4g00005 199 Pfam O-methyltransferase 18 198 IPR002935 GO:0008171
Vivi4g00005 199 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 197 IPR029063 -
Vivi4g00005 199 Gene3D Vaccinia Virus protein VP39 3 199 IPR029063 -
Vivi4g00005 199 PANTHER O-METHYLTRANSFERASE-RELATED 12 198 - -
Vivi4g00005 199 CDD AdoMet_MTases 37 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00005 Vivi-Chr4 118574 120045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00005 14 198 Monolignol Biosynthesis Gene Families AT4G26220 62.703 3.70e-83 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00005 K00588 - gmx:100800911 339.732