Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi49g00033 ATGTATTCTCAAGAGCCTGGTCATGGTTACGGGGTTTCTCGGTCTGGTGACAAGATGTTGGAAGAAGATAGTCGACCATCGGCTTCACGTGATGGTAAATACGGCAGGAGCAGTAGGGACAACAGAGGTTCGTCTGGCCATAGAGATTGGAGAGGTCATTCGTGGGAAGCCACCAATGGCTCCCCAAATTTATCCAGGAGACCATCAGATATGAATAGTGACCGGAGGTCAGTTGATGATTCCACAACATATTCCTCTCATCCCCATTCTGATTCTGTGAACACTCGGGAACAGCATCAATTGAAAGACCTGCATGATAAGATGGGCGCTGTCAATGAGTTGGGAGCAGCACCAAGATGTGATAAAGAGAATTCTTCAATTGACTGGAAGCCACTAAAATGGAACCGATCTGGAAGCTTGTCTTCTCGAGGCTCCGGTTTTAGCCACTCAAGTAGTTCACGGAGCATGGCAGGGACAGATTCCAATGAAGCAAAGCCCGATTTGAAACCCAAAAATATCACTGCTATTGAGTCTCATTCAGGGGAAGGCACTGCATGTGTGACATCTTCTATGCCATCTGAAGATACAGCTTCTAGAAAGAAGCCTAGGCTAAATTGGGGTGAGGGACTTGCAAAGTACGAGAAGAAAAAAGTTGAGCGACCTGATGCAGGAGCAAACAAAGATGGCTCAGTCTCGTCTGCCGGCAATATGGAACCTTGTAATTTCATTAGCTCCAACTTAGTAGATAAAAGCCCAAAAGTTACAGGATTTTCAGACTGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGCGTGGATGATAAATTATTGGAAAAAATTGCAAATGCAGACAATAATTTAAGTAATTCGAGTGATTCACCTGCTACTGGGTTCCGGAATCACCTGCAGAAGTTTTATCTTAACCTTGATAAGCTGGATATTGACTCCTTGAATAATTTGGGCTCTTCAATTGTTGAGTTAGTACAGTCTGATGATCCAAGTTCTGAAGATTCTTGTCTAGTTAGGTCGAATGCAATTAAAACGTTACTGATATGGAAAGCTGACATTTCAAAGGTATTGGAGGTGACTGAATCTGAAATTGATTTGCTTGAAAATGAACTTAAGTCTCTAAAATCTGATTCTGTGGATAGATATCAGTCTCCAGAAGCATTGGGCTCCCAGCAGGCAGATAGCAGTATAAAAATCTATGAAGAACAAGAAGTCTCTCAGAAGGTTATTCGGCCAGTACCATTGAAAATTATTTCTTCCGATGAACCTAATATAGAGAAGATGCCGCTGTCAACTAATTTATGTAGTATTCATGATAATGACAAGGAAGAGGATATTGACAGTCCTGGATCAGCAACTTCTAAATTTGTTGAGCCTCTGCCTTTGGTAAAAGCAGTTTCTTCACGTGATACTGGGGGATATGATAACTTATCAAGGGACATGGATACTGTTCAGTCTACTTCGATGAAATGCTTAGTCCGGTGTACTACTAGGAAAGATCCTAGTGTATCTGCTTGTAATGATTTCAATACACCTATGGATGTAAAGGAAACCTTTGGAGCAAACACATGTTCTATCTATGAGGATACTTATAATTCAATTATTGCTTCAAACAAAGAATCTGCAAACAAAGCGCATGGAGTATTTGCTAAGTTAGTGCCCAATGACTGTAAAAAGCTTGTTAACATGGGAGTCAGCAATGATTCATCCTGTCATACATTTGTTATGGAAAAATTTGCCGAGAAAAAGCGTCTTGAAAAAGTTAAGGAGAAAGTTGCTGCACTCAAGTTCAAAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCTTATTGTCTATTAAGAAATGCCGGCCAAAATCTCATAAGAAAAATGAACCAAGTAGTAGTAATCTGAAAAACCGATCTTCCATTCGTTCCCGGTTTCCTTTCCCAGGTGGAAATCATCTAAGCTTGGTTCCAACATCAGAGCTTATTGATTTCGCAAGCAAACTTCTTTCAAAATCCCAAACGCAGATTCAGAGAAACACCCTGAAGATGCCAGCATTAATATTGGATGAGAAAGAAAAGATGGTTACAAGATTCATATCTAGTAATGGGCTGATTGAAGATCCGCTGGCTACTGAGAAAGAAAGAAATATGATCAATCCTTGGACATCAGAAGAGAAAGAAATATTCTTAGAGAAATTTGCTGTGTTTGGAAAAGATTTCCGGAAAATTGCTTCTTTCCTTGATCACAAGACAACTGCGGACTGTGTAGAATTCTACTACAAGAATCACAAATCTGAGTGTTTTCAGAAATTGAAAACGAAAGATGTTGGTAAGCTAGGGAAGTCATATGCAGCTAGAACTAACTTGATGGCATCAGGTAATAAAAGGATGCGAGCAGGAAGATTCCTTTTGGAAGGATTTGATAATATAAAATCATCGAGGGGCGGGGACAGCATTATAGAGAGATCAAATAGTCCGGACACTCTTGGGGATGAAAGGGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGGTCGTTTTCATCTGAGGCTATGAGCTCCTGCATAACAAATTCAATTGATCCTGTAGATGGTAATAAGGAAAGGGAATTCTTGAAAGCGAACCCTTTGCGCAATCAAACCTTGACGCCTGATATTTCTCAGAATGCTGATGATGAGACTTGTTCAGATGAGAGCTGTGAGGAAGTAGATCTTTCTGGGTGGACAGATGATGAGAAGGCGGCTTTTCTTCAGGCTGTATCATCTTTTGGTAAGGATTTTACAAAGATAGCACAGTGTGTAGGCACAAGGTCCAGAGAACATTGTAAAGTCTTCTTCAGCAAGACTCAAAAGTGCCTTGGATTAAATCTCGTACGCCCTATACCTGGAATTGTAGGATCCCCGCCGAATGATGATGCAAATGGTGGTGAGAGTGACACAGATGATGCATGTCTTGTTAAGGCAGGCTCTGTGGTTGATGCTGATAAGTCTGGGAATAAGACAGACGAGGACCTGCCTTCTGATGCCTTGAATACATTCCATGGTGAATCCAATCCTCTGGAAGTTAGGAGCTTGTCAGCTGAATTAAATGAATCAAGAGAAATCACTGGGACAGAAGTACATCTTGAAAATGTAGATATGGTTTCCGATGTTTGTGCAATTAAGGTTGAAACTAGGCCGGGTTCTGATGATAGCGGAGTTAGCTTGGGCAAAACTGACAAGTCTTGTTCAGTCAATGAGCATCCAGTTAAAATTACATCTGATAGCATAGAAGTTGCCAAAGGTAAAACAAATAAATTGGGAGATGCAGTTAGAGAATCAATTTCTACTGTAGGAATAATTAAACCACTGGAGTGTGGTTCTGTTGCTATGGATACAACGGTTTCAGAGGGTTCTTCTGGAGATCTCAGAAATGAAGTGGAAAGAAGGCAAAGAGTGGCAGCACCCCCTTGCTCTGATGACAGAGATGATAAACATGAAGCTGATGCAGGTGTTGCAGTTGAATCGAAAAGTTGTGTGTTAGAGTCAAGCACGACCGCAAATCTTTCATTCTCACATGTGGCCAATTCATGCTCAGGATTGAGCTTTGGTTCTGAAAATAAGCATGTCTCCTTTGGAAAGCCTCATGCCTCAGCATTATCTACAAACAATTCTTGGGCTACTACAAATTCGTTGTTGCTAAACGCTGCTGCTGCTCCATGTGAAAAAGCAATTAGCCAGGATAGATTGTCCTCTAATTGTGATGTTCAAAGAGGTAGAGATATGGGGTGTCATAGTTCTGGTAGCAACGGTGACCATCAGTTTCCTCTTCCATGCAATCATCTTGAGACTGTTAGCATCCTCCAGGGCTATCCCTTGCAGGTGCCCGTCAAGAAGGAAGTGGACGGGGATGTGAATTGCAGCAGTTCAGTGACTGAGTTCCCCTTTCCCCAAAAAGTCAAACAGACTGATGATCATTTCAAAACATTATGGCATTCTTCTGATTCAGAAAACACATCCAGAAATGGTAATGTGAAACTGTTTGGAAAGATTATAACCAATCCTTCTTCCAGTCAGAAACCTAATTTGATTACGAAGGGAAGTGAAGAAAACGGTACTCATCATCATCCCAAGTCAAGCAACAAGTCTTGTAAGCGTAAAATTACTAGCCATCAAAATTCTGATGGAAAGTTGAAAATTTTAAAGTTTGACCGTGCTGATTATCTTGGCGTTGAAAATGTTCCAGTGAAGAGTTATGGTTATTGGGAAGGGACTGGAATAACACAAACTGGTCTCCCATCATTGCCCGATTCTTCCTTCTTGTTAGCTAAATATCCTGCTGCCTTCAGCAATTATCCTACATCATCTTCCACTTTGGAGCAACAACCATTGCAGGCGTTTGGTGCATCTACTTTTACTGCTAGAGACATCAATGGAAGCAATGCCATGATTGACTGTCCGATGTTTATAAGTAGGGATGGTCCGAAAGTGCAGCCATTTATAGTAGATGTCAAGCACAGCCAAGATGTATTCTCTGAGATGCAGAGAAACAGTTTTGAAGCAATATCTAGTTTGCAGCAGCATGGAATAGGAGTGATGGGAATGAATGGCGTTGGAAGACCTGGGATTCTAGTGGGTGGGTCATGCAGTGGTGTCTCTGATCCTGTAGCAGCAATCAAAATGCATTATTCTAATTCCGAGAAGTATGGTGGTCAGAACGGGAGTATCTTGAGAGATGATGAATCTTGGGGAGGGAAAGGGGACATAGGCAGGTAG 4773 0.4165 MYSQEPGHGYGVSRSGDKMLEEDSRPSASRDGKYGRSSRDNRGSSGHRDWRGHSWEATNGSPNLSRRPSDMNSDRRSVDDSTTYSSHPHSDSVNTREQHQLKDLHDKMGAVNELGAAPRCDKENSSIDWKPLKWNRSGSLSSRGSGFSHSSSSRSMAGTDSNEAKPDLKPKNITAIESHSGEGTACVTSSMPSEDTASRKKPRLNWGEGLAKYEKKKVERPDAGANKDGSVSSAGNMEPCNFISSNLVDKSPKVTGFSDCASPATPSSVACSSSPGVDDKLLEKIANADNNLSNSSDSPATGFRNHLQKFYLNLDKLDIDSLNNLGSSIVELVQSDDPSSEDSCLVRSNAIKTLLIWKADISKVLEVTESEIDLLENELKSLKSDSVDRYQSPEALGSQQADSSIKIYEEQEVSQKVIRPVPLKIISSDEPNIEKMPLSTNLCSIHDNDKEEDIDSPGSATSKFVEPLPLVKAVSSRDTGGYDNLSRDMDTVQSTSMKCLVRCTTRKDPSVSACNDFNTPMDVKETFGANTCSIYEDTYNSIIASNKESANKAHGVFAKLVPNDCKKLVNMGVSNDSSCHTFVMEKFAEKKRLEKVKEKVAALKFKALHHLWKEDMRLLSIKKCRPKSHKKNEPSSSNLKNRSSIRSRFPFPGGNHLSLVPTSELIDFASKLLSKSQTQIQRNTLKMPALILDEKEKMVTRFISSNGLIEDPLATEKERNMINPWTSEEKEIFLEKFAVFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFQKLKTKDVGKLGKSYAARTNLMASGNKRMRAGRFLLEGFDNIKSSRGGDSIIERSNSPDTLGDERETAAAADVLAGICGSFSSEAMSSCITNSIDPVDGNKEREFLKANPLRNQTLTPDISQNADDETCSDESCEEVDLSGWTDDEKAAFLQAVSSFGKDFTKIAQCVGTRSREHCKVFFSKTQKCLGLNLVRPIPGIVGSPPNDDANGGESDTDDACLVKAGSVVDADKSGNKTDEDLPSDALNTFHGESNPLEVRSLSAELNESREITGTEVHLENVDMVSDVCAIKVETRPGSDDSGVSLGKTDKSCSVNEHPVKITSDSIEVAKGKTNKLGDAVRESISTVGIIKPLECGSVAMDTTVSEGSSGDLRNEVERRQRVAAPPCSDDRDDKHEADAGVAVESKSCVLESSTTANLSFSHVANSCSGLSFGSENKHVSFGKPHASALSTNNSWATTNSLLLNAAAAPCEKAISQDRLSSNCDVQRGRDMGCHSSGSNGDHQFPLPCNHLETVSILQGYPLQVPVKKEVDGDVNCSSSVTEFPFPQKVKQTDDHFKTLWHSSDSENTSRNGNVKLFGKIITNPSSSQKPNLITKGSEENGTHHHPKSSNKSCKRKITSHQNSDGKLKILKFDRADYLGVENVPVKSYGYWEGTGITQTGLPSLPDSSFLLAKYPAAFSNYPTSSSTLEQQPLQAFGASTFTARDINGSNAMIDCPMFISRDGPKVQPFIVDVKHSQDVFSEMQRNSFEAISSLQQHGIGVMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSEKYGGQNGSILRDDESWGGKGDIGR 1590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi49g00033 1590 SUPERFAMILY Homeodomain-like 708 769 IPR009057 -
Vivi49g00033 1590 Coils Coil 358 385 - -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 1569 1590 - -
Vivi49g00033 1590 CDD SANT 914 952 IPR001005 -
Vivi49g00033 1590 SMART sant 910 958 IPR001005 -
Vivi49g00033 1590 SMART sant 721 769 IPR001005 -
Vivi49g00033 1590 SUPERFAMILY Homeodomain-like 911 960 IPR009057 -
Vivi49g00033 1590 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 799 1589 - -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 177 195 - -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 1351 1367 - -
Vivi49g00033 1590 Gene3D - 701 773 - -
Vivi49g00033 1590 Pfam Myb-like DNA-binding domain 914 953 IPR001005 -
Vivi49g00033 1590 Pfam Myb-like DNA-binding domain 724 765 IPR001005 -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 1141 1168 - -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 213 232 - -
Vivi49g00033 1590 Gene3D - 872 965 - -
Vivi49g00033 1590 ProSiteProfiles SANT domain profile. 909 960 IPR017884 -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 15 54 - -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 130 160 - -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 1134 1168 - -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 1351 1390 - -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 92 109 - -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 1 208 - -
Vivi49g00033 1590 ProSiteProfiles SANT domain profile. 720 771 IPR017884 -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 624 647 - -
Vivi49g00033 1590 MobiDBLite consensus disorder prediction 1001 1021 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi49g00033 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi49g00033 - - psat:127097984 2742.99