Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi49g00032 ATGCCGCCGGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCGGAATCGGTTGGGTCTGTGGCGAGATGGAGAGATTCTTCTCATCACCGAGACTTGAATCGATGGGGATCCACGGAATTTCGCAGACCGCCTGGTCATGGTAAGCAGGGTGGTTGGCATATGTATTCTCAAGAGCCTGGTCATGGTTACGGGGTTTCTCGGTCTGGTGACAAGATGTTGGAAGAAGATAGTCGACCATCGGCTTCACGTGATGGTAAATACGGCAGGAGCAGTAGGGACAACAGAGGTTCGTCTGGCCATAGAGATTGGAGAGGTCATTCGTGGGAAGCCACCAATGGCTCCCCAAATTTATCCAGGAGACCATCAGATATGAATAGTGACCGGAGGTCAGTTGATGATTCCACAACATATTCCTCTCATCCCCATTCTGATTCTGTGAACACTCGGGAACAGCATCAATTGAAAGACCTGCATGATAAGATGGGCGCTGTCAATGAGTTGGGAGCAGCACCAAGATGTGATAAAGAGAATTCTTCAATTGACTGGAAGCCACTAAAATGGAACCGATCTGGAAGCTTGTCTTCTCGAGGCTCCGGTTTTAGCCACTCAAGTAGTTCACGGAGCATGGCAGGGACAGATTCCAATGAAGCAAAGCCCGATTTGAAACCCAAAAATATCACTGCTATTGAGTCTCATTCAGGGGAAGGCACTGCATGTGTGACATCTTCTATGCCATCTGAAGATACAGCTTCTAGAAAGAAGCCTAGGCTAAATTGGGGTGAGGGACTTGCAAAGTACGAGAAGAAAAAAGTTGAGCGACCTGATGCAGGAGCAAACAAAGATGGCTCAGTCTCGTCTGCCGGCAATATGGAACCTTGTAATTTCATTAGCTCCAACTTAGTAGATAAAAGCCCAAAAGTTACAGGATTTTCAGACTGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGCGTGGATGATAAATTATTGGAAAAAATTGCAAATGCAGACAATAATTTAAGTAATTCGAGTGATTCACCTGCTACTGGGTTCCGGAATCACCTGCAGAAGTTTTATCTTAACCTTGATAAGCTGGATATTGACTCCTTGAATAATTTGGGCTCTTCAATTGTTGAGTTAGTACAGTCTGATGATCCAAGTTCTGAAGATTCTTGTCTAGTTAGGTCGAATGCAATTAAAACGTTACTGATATGGAAAGCTGACATTTCAAAGGTATTGGAGGTGACTGAATCTGAAATTGATTTGCTTGAAAATGAACTTAAGTCTCTAAAATCTGATTCTGTGGATAGATATCAGTCTCCAGAAGCATTGGGCTCCCAGCAGGCAGATAGCAGTATAAAAATCTATGAAGAACAAGAAGTCTCTCAGAAGGTTATTCGGCCAGTACCATTGAAAATTATTTCTTCCGATGAACCTAATATAGAGAAGATGCCGCTGTCAACTAATTTATGTAGTATTCATGATAATGACAAGGAAGAGGATATTGACAGTCCTGGATCAGCAACTTCTAAATTTGTTGAGCCTCTGCCTTTGGTAAAAGCAGTTTCTTCACGTGATACTGGGGGATATGATAACTTATCAAGGGACATGGATACTGTTCAGTCTACTTCGATGAAATGCTTAGTCCGGTGTACTACTAGGAAAGATCCTAGTGTATCTGCTTGTAATGATTTCAATACACCTATGGATGTAAAGGAAACCTTTGGAGCAAACACATGTTCTATCTATGAGGATACTTATAATTCAATTATTGCTTCAAACAAAGAATCTGCAAACAAAGCGCATGGAGTATTTGCTAAGTTAGTGCCCAATGACTGTAAAAAGCTTGTTAACATGGGAGTCAGCAATGATTCATCCTGTCATACATTTGTTATGGAAAAATTTGCCGAGAAAAAGCGTCTTGAAAAAGTTAAGGAGAAAGTTGCTGCACTCAAGTTCAAAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCTTATTGTCTATTAAGAAATGCCGGCCAAAATCTCATAAGAAAAATGAACCAAGTAGTAGTAATCTGAAAAACCGATCTTCCATTCGTTCCCGGTTTCCTTTCCCAGGTGGAAATCATCTAAGCTTGGTTCCAACATCAGAGCTTATTGATTTCGCAAGCAAACTTCTTTCAAAATCCCAAACGCAGATTCAGAGAAACACCCTGAAGATGCCAGCATTAATATTGGATGAGAAAGAAAAGATGGTTACAAGATTCATATCTAGTAATGGGCTGATTGAAGATCCGCTGGCTACTGAGAAAGAAAGAAATATGATCAATCCTTGGACATCAGAAGAGAAAGAAATATTCTTAGAGAAATTTGCTGTGTTTGGAAAAGATTTCCGGAAAATTGCTTCTTTCCTTGATCACAAGACAACTGCGGACTGTGTAGAATTCTACTACAAGAATCACAAATCTGAGTGTTTTCAGAAATTGAAAACGAAAGATGTTGGTAAGCTAGGGAAGTCATATGCAGCTAGAACTAACTTGATGGCATCAGGTAATAAAAGGATGCGAGCAGGAAGATTCCTTTTGGAAGGATTTGATAATATAAAATCATCGAGGGGCGGGGACAGCATTATAGAGAGATCAAATAGTCCGGACACTCTTGGGGATGAAAGGGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGGTCGTTTTCATCTGAGGCTATGAGCTCCTGCATAACAAATTCAATTGATCCTGTAGATGGTAATAAGGAAAGGGAATTCTTGAAAGCGAACCCTTTGCGCAATCAAACCTTGACGCCTGATATTTCTCAGAATGCTGATGATGAGACTTGTTCAGATGAGAGCTGTGAGGAAGTAGATCTTTCTGGGTGGACAGATGATGAGAAGGCGGCTTTTCTTCAGGCTGTATCATCTTTTGGTAAGGATTTTACAAAGATAGCACAGTGTGTAGGCACAAGGTCCAGAGAACATTGTAAAGTCTTCTTCAGCAAGACTCAAAAGTGCCTTGGATTAAATCTCGTACGCCCTATACCTGGAATTGTAGGATCCCCGCCGAATGATGATGCAAATGGTGGTGAGAGTGACACAGATGATGCATGTCTTGTTAAGGCAGGCTCTGTGGTTGATGCTGATAAGTCTGGGAATAAGACAGACGAGGACCTGCCTTCTGATGCCTTGAATACATTCCATGGTGAATCCAATCCTCTGGAAGTTAGGAGCTTGTCAGCTGAATTAAATGAATCAAGAGAAATCACTGGGACAGAAGTACATCTTGAAAATGTAGATATGGTTTCCGATGTTTGTGCAATTAAGGTTGAAACTAGGCCGGGTTCTGATGATAGCGGAGTTAGCTTGGGCAAAACTGACAAGTCTTGTTCAGTCAATGAGCATCCAGTTAAAATTACATCTGATAGCATAGAAGTTGCCAAAGGTAAAACAAATAAATTGGGAGATGCAGTTAGAGAATCAATTTCTACTGTAGGAATAATTAAACCACTGGAGTGTGGTTCTGTTGCTATGGATACAACGGTTTCAGAGGGTTCTTCTGGAGATCTCAGAAATGAAGTGGAAAGAAGGCAAAGAGTGGCAGCACCCCCTTGCTCTGATGACAGAGATGATAAACATGAAGCTGATGCAGGTGTTGCAGTTGAATCGAAAAGTTGTGTGTTAGAGTCAAGCACGACCGCAAATCTTTCATTCTCACATGTGGCCAATTCATGCTCAGGATTGAGCTTTGGTTCTGAAAATAAGCATGTCTCCTTTGGAAAGCCTCATGCCTCAGCATTATCTACAAACAATTCTTGGGCTACTACAAATTCGTTGTTGCTAAACGCTGCTGCTGCTCCATGTGAAAAAGCAATTAGCCAGGATAGATTGTCCTCTAATTGTGATGTTCAAAGAGGTAGAGATATGGGGTGTCATAGTTCTGGTAGCAACGGTGACCATCAGTTTCCTCTTCCATGCAATCATCTTGAGACTGTTAGCATCCTCCAGGGCTATCCCTTGCAGGTGCCCGTCAAGAAGGAAGTGGACGGGGATGTGAATTGCAGCAGTTCAGTGACTGAGTTCCCCTTTCCCCAAAAAGTCAAACAGACTGATGATCATTTCAAAACATTATGGCATTCTTCTGATTCAGAAAACACATCCAGAAATGGTAATGTGAAACTGTTTGGAAAGATTATAACCAATCCTTCTTCCAGTCAGAAACCTAATTTGATTACGAAGGGAAGTGAAGAAAACGGTACTCATCATCATCCCAAGTCAAGCAACAAGTCTTGTAAGCGTAAAATTACTAGCCATCAAAATTCTGATGGAAAGTTGAAAATTTTAAAGTTTGACCGTGCTGATTATCTTGGCGTTGAAAATGTTCCAGTGAAGAGTTATGGTTATTGGGAAGGGACTGGAATAACACAAACTGGTCTCCCATCATTGCCCGATTCTTCCTTCTTGTTAGCTAAATATCCTGCTGCCTTCAGCAATTATCCTACATCATCTTCCACTTTGGAGCAACAACCATTGCAGGCGTTTGGTGCATCTACTTTTACTGCTAGAGACATCAATGGAAGCAATGCCATGATTGACTGTCCGATGTTTATAAGTAGGGATGGTCCGAAAGTGCAGCCATTTATAGTAGATGTCAAGCACAGCCAAGATGTATTCTCTGAGATGCAGAGAAACAGTTTTGAAGCAATATCTAGTTTGCAGCAGCATGGAATAGGAGTGATGGGAATGAATGGCGTTGGAAGACCTGGGATTCTAGTGGGTGGGTCATGCAGTGGTGTCTCTGATCCTGTAGCAGCAATCAAAATGCATTATTCTAATTCCGAGAAGTATGGTGGTCAGAACGGGAGTATCTTGAGAGATGATGAATCTTGGGGAGGGAAAGGGGACATAGGCAGGTAG 4956 0.4213 MPPEPLPWDRKDFFKERKHERSESVGSVARWRDSSHHRDLNRWGSTEFRRPPGHGKQGGWHMYSQEPGHGYGVSRSGDKMLEEDSRPSASRDGKYGRSSRDNRGSSGHRDWRGHSWEATNGSPNLSRRPSDMNSDRRSVDDSTTYSSHPHSDSVNTREQHQLKDLHDKMGAVNELGAAPRCDKENSSIDWKPLKWNRSGSLSSRGSGFSHSSSSRSMAGTDSNEAKPDLKPKNITAIESHSGEGTACVTSSMPSEDTASRKKPRLNWGEGLAKYEKKKVERPDAGANKDGSVSSAGNMEPCNFISSNLVDKSPKVTGFSDCASPATPSSVACSSSPGVDDKLLEKIANADNNLSNSSDSPATGFRNHLQKFYLNLDKLDIDSLNNLGSSIVELVQSDDPSSEDSCLVRSNAIKTLLIWKADISKVLEVTESEIDLLENELKSLKSDSVDRYQSPEALGSQQADSSIKIYEEQEVSQKVIRPVPLKIISSDEPNIEKMPLSTNLCSIHDNDKEEDIDSPGSATSKFVEPLPLVKAVSSRDTGGYDNLSRDMDTVQSTSMKCLVRCTTRKDPSVSACNDFNTPMDVKETFGANTCSIYEDTYNSIIASNKESANKAHGVFAKLVPNDCKKLVNMGVSNDSSCHTFVMEKFAEKKRLEKVKEKVAALKFKALHHLWKEDMRLLSIKKCRPKSHKKNEPSSSNLKNRSSIRSRFPFPGGNHLSLVPTSELIDFASKLLSKSQTQIQRNTLKMPALILDEKEKMVTRFISSNGLIEDPLATEKERNMINPWTSEEKEIFLEKFAVFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFQKLKTKDVGKLGKSYAARTNLMASGNKRMRAGRFLLEGFDNIKSSRGGDSIIERSNSPDTLGDERETAAAADVLAGICGSFSSEAMSSCITNSIDPVDGNKEREFLKANPLRNQTLTPDISQNADDETCSDESCEEVDLSGWTDDEKAAFLQAVSSFGKDFTKIAQCVGTRSREHCKVFFSKTQKCLGLNLVRPIPGIVGSPPNDDANGGESDTDDACLVKAGSVVDADKSGNKTDEDLPSDALNTFHGESNPLEVRSLSAELNESREITGTEVHLENVDMVSDVCAIKVETRPGSDDSGVSLGKTDKSCSVNEHPVKITSDSIEVAKGKTNKLGDAVRESISTVGIIKPLECGSVAMDTTVSEGSSGDLRNEVERRQRVAAPPCSDDRDDKHEADAGVAVESKSCVLESSTTANLSFSHVANSCSGLSFGSENKHVSFGKPHASALSTNNSWATTNSLLLNAAAAPCEKAISQDRLSSNCDVQRGRDMGCHSSGSNGDHQFPLPCNHLETVSILQGYPLQVPVKKEVDGDVNCSSSVTEFPFPQKVKQTDDHFKTLWHSSDSENTSRNGNVKLFGKIITNPSSSQKPNLITKGSEENGTHHHPKSSNKSCKRKITSHQNSDGKLKILKFDRADYLGVENVPVKSYGYWEGTGITQTGLPSLPDSSFLLAKYPAAFSNYPTSSSTLEQQPLQAFGASTFTARDINGSNAMIDCPMFISRDGPKVQPFIVDVKHSQDVFSEMQRNSFEAISSLQQHGIGVMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSEKYGGQNGSILRDDESWGGKGDIGR 1651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi49g00032 1651 Gene3D - 933 1026 - -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 1630 1651 - -
Vivi49g00032 1651 CDD SANT 975 1013 IPR001005 -
Vivi49g00032 1651 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1650 - -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 191 221 - -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 1062 1082 - -
Vivi49g00032 1651 ProSiteProfiles SANT domain profile. 781 832 IPR017884 -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 8 45 - -
Vivi49g00032 1651 Pfam Myb-like DNA-binding domain 785 826 IPR001005 -
Vivi49g00032 1651 Pfam Myb-like DNA-binding domain 975 1014 IPR001005 -
Vivi49g00032 1651 ProSiteProfiles SANT domain profile. 970 1021 IPR017884 -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 76 115 - -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 153 170 - -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 1412 1451 - -
Vivi49g00032 1651 SUPERFAMILY Homeodomain-like 769 830 IPR009057 -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 1202 1229 - -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 687 708 - -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 238 256 - -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 1 269 - -
Vivi49g00032 1651 SUPERFAMILY Homeodomain-like 972 1021 IPR009057 -
Vivi49g00032 1651 Coils Coil 419 446 - -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 1195 1229 - -
Vivi49g00032 1651 SMART sant 782 830 IPR001005 -
Vivi49g00032 1651 SMART sant 971 1019 IPR001005 -
Vivi49g00032 1651 Gene3D - 762 834 - -
Vivi49g00032 1651 MobiDBLite consensus disorder prediction 1412 1428 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi49g00032 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi49g00032 - - psat:127097984 2881.28