Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi49g00031 ATGCCGCCGGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCGGAATCGGTTGGGTCTGTGGCGAGATGGAGAGATTCTTCTCATCACCGAGACTTGAATCGATGGGGATCCACGGAATTTCGCAGACCGCCTGGTCATGGTAAGCAGGGTGGTTGGCATATGTATTCTCAAGAGCCTGGTCATGGTTACGGGGTTTCTCGGTCTGGTGACAAGATGTTGGAAGAAGATAGTCGACCATCGGCTTCACGTGATGGTAAATACGGCAGGAGCAGTAGGGACAACAGAGGTTCGTCTGGCCATAGAGATTGGAGAGGTCATTCGTGGGAAGCCACCAATGGCTCCCCAAATTTATCCAGGAGACCATCAGATATGAATAGTGACCGGAGGTCAGTTGATGATTCCACAACATATTCCTCTCATCCCCATTCTGATTCTGTGAACACTCGGGAACAGCATCAATTGAAAGACCTGCATGATAAGATGGGCGCTGTCAATGAGTTGGGAGCAGCACCAAGATGTGATAAAGAGAATTCTTCAATTGACTGGAAGCCACTAAAATGGAACCGATCTGGAAGCTTGTCTTCTCGAGGCTCCGGTTTTAGCCACTCAAGTAGTTCACGGAGCATGGCAGGGACAGATTCCAATGAAGCAAAGCCCGATTTGAAACCCAAAAATATCACTGCTATTGAGTCTCATTCAGGGGAAGGCACTGCATGTGTGACATCTTCTATGCCATCTGAAGATACAGCTTCTAGAAAGAAGCCTAGGCTAAATTGGGGTGAGGGACTTGCAAAGTACGAGAAGAAAAAAGTTGAGCGACCTGATGCAGGAGCAAACAAAGATGGCTCAGTCTCGTCTGCCGGCAATATGGAACCTTGTAATTTCATTAGCTCCAACTTAGTAGATAAAAGCCCAAAAGTTACAGGATTTTCAGACTGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGCGTGGATGATAAATTATTGGAAAAAATTGCAAATGCAGACAATAATTTAAGTAATTCGAGTGATTCACCTGCTACTGGGTTCCGGAATCACCTGCAGAAGTTTTATCTTAACCTTGATAAGCTGGATATTGACTCCTTGAATAATTTGGGCTCTTCAATTGTTGAGTTAGTACAGTCTGATGATCCAAGTTCTGAAGATTCTTGTCTAGTTAGGTCGAATGCAATTAAAACGTTACTGATATGGAAAGCTGACATTTCAAAGGTATTGGAGGTGACTGAATCTGAAATTGATTTGCTTGAAAATGAACTTAAGTCTCTAAAATCTGATTCTGTGGATAGATATCAGTCTCCAGAAGCATTGGGCTCCCAGCAGGCAGATAGCAGTATAAAAATCTATGAAGAACAAGAAGTCTCTCAGAAGGTTATTCGGCCAGTACCATTGAAAATTATTTCTTCCGATGAACCTAATATAGAGAAGATGCCGCTGTCAACTAATTTATGTAGTATTCATGATAATGACAAGGAAGAGGATATTGACAGTCCTGGATCAGCAACTTCTAAATTTGTTGAGCCTCTGCCTTTGGTAAAAGCAGTTTCTTCACGTGATACTGGGGGATATGATAACTTATCAAGGGACATGGATACTGTTCAGTCTACTTCGATGAAATGCTTAGTCCGGTGTACTACTAGGAAAGATCCTAGTGTATCTGCTTGTAATGATTTCAATACACCTATGGATGTAAAGGAAACCTTTGGAGCAAACACATGTTCTATCTATGAGGATACTTATAATTCAATTATTGCTTCAAACAAAGAATCTGCAAACAAAGCGCATGGAGTATTTGCTAAGTTAGTGCCCAATGACTGTAAAAAGCTTGTTAACATGGGAGTCAGCAATGATTCATCCTGTCATACATTTGTTATGGAAAAATTTGCCGAGAAAAAGCGTCTTGAAAAAGTTAAGGAGAAAGTTGCTGCACTCAAGTTCAAAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCTTATTGTCTATTAAGAAATGCCGGCCAAAATCTCATAAGAAAAATGAACCAAGTAGTAGTAATCTGAAAAACCGATCTTCCATTCGTTCCCGGTTTCCTTTCCCAGGTGGAAATCATCTAAGCTTGGTTCCAACATCAGAGCTTATTGATTTCGCAAGCAAACTTCTTTCAAAATCCCAAACGCAGATTCAGAGAAACACCCTGAAGATGCCAGCATTAATATTGGATGAGAAAGAAAAGATGGTTACAAGATTCATATCTAGTAATGGGCTGATTGAAGATCCGCTGGCTACTGAGAAAGAAAGAAATATGATCAATCCTTGGACATCAGAAGAGAAAGAAATATTCTTAGAGAAATTTGCTGTGTTTGGAAAAGATTTCCGGAAAATTGCTTCTTTCCTTGATCACAAGACAACTGCGGACTGTGTAGAATTCTACTACAAGAATCACAAATCTGAGTGTTTTCAGAAATTGAAAACGAAAGATGTTGGTAAGCTAGGGAAGTCATATGCAGCTAGAACTAACTTGATGGCATCAGGTATAACATGGAATCATGAAGTTAATGTTTCTTCCTTTGATATTTTGAGTGCAGCTTCACTGATGGCAGATGACATTGCAGGTAATAAAAGGATGCGAGCAGGAAGATTCCTTTTGGAAGGATTTGATAATATAAAATCATCGAGGGGCGGGGACAGCATTATAGAGAGATCAAATAGTCCGGACACTCTTGGGGATGAAAGGGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGGTCGTTTTCATCTGAGGCTATGAGCTCCTGCATAACAAATTCAATTGATCCTGTAGATGGTAATAAGGAAAGGGAATTCTTGAAAGCGAACCCTTTGCGCAATCAAACCTTGACGCCTGATATTTCTCAGAATGCTGATGATGAGACTTGTTCAGATGAGAGCTGTGAGGAAGTAGATCTTTCTGGGTGGACAGATGATGAGAAGGCGGCTTTTCTTCAGGCTGTATCATCTTTTGGTAAGGATTTTACAAAGATAGCACAGTGTGTAGGCACAAGGTCCAGAGAACATTGTAAAGTCTTCTTCAGCAAGACTCAAAAGTGCCTTGGATTAAATCTCGTACGCCCTATACCTGGAATTGTAGGATCCCCGCCGAATGATGATGCAAATGGTGGTGAGAGTGACACAGATGATGCATGTCTTGTTAAGGCAGGCTCTGTGGTTGATGCTGATAAGTCTGGGAATAAGACAGACGAGGACCTGCCTTCTGATGCCTTGAATACATTCCATGGTGAATCCAATCCTCTGGAAGTTAGGAGCTTGTCAGCTGAATTAAATGAATCAAGAGAAATCACTGGGACAGAAGTACATCTTGAAAATGTAGATATGGTTTCCGATGTTTGTGCAATTAAGGTTGAAACTAGGCCGGGTTCTGATGATAGCGGAGTTAGCTTGGGCAAAACTGACAAGTCTTGTTCAGTCAATGAGCATCCAGTTAAAATTACATCTGATAGCATAGAAGTTGCCAAAGGTAAAACAAATAAATTGGGAGATGCAGTTAGAGAATCAATTTCTACTGTAGGAATAATTAAACCACTGGAGTGTGGTTCTGTTGCTATGGATACAACGGTTTCAGAGGGTTCTTCTGGAGATCTCAGAAATGAAGTGGAAAGAAGGCAAAGAGTGGCAGCACCCCCTTGCTCTGATGACAGAGATGATAAACATGAAGCTGATGCAGGTGTTGCAGTTGAATCGAAAAGTTGTGTGTTAGAGTCAAGCACGACCGCAAATCTTTCATTCTCACATGTGGCCAATTCATGCTCAGGATTGAGCTTTGGTTCTGAAAATAAGCATGTCTCCTTTGGAAAGCCTCATGCCTCAGCATTATCTACAAACAATTCTTGGGCTACTACAAATTCGTTGTTGCTAAACGCTGCTGCTGCTCCATGTGAAAAAGCAATTAGCCAGGATAGATTGTCCTCTAATTGTGATGTTCAAAGAGGTAGAGATATGGGGTGTCATAGTTCTGGTAGCAACGGTGACCATCAGTTTCCTCTTCCATGCAATCATCTTGAGACTGTTAGCATCCTCCAGGGCTATCCCTTGCAGGTGCCCGTCAAGAAGGAAGTGGACGGGGATGTGAATTGCAGCAGTTCAGTGACTGAGTTCCCCTTTCCCCAAAAAGTCAAACAGACTGATGATCATTTCAAAACATTATGGCATTCTTCTGATTCAGAAAACACATCCAGAAATGGTAATGTGAAACTGTTTGGAAAGATTATAACCAATCCTTCTTCCAGTCAGAAACCTAATTTGATTACGAAGGGAAGTGAAGAAAACGGTACTCATCATCATCCCAAGTCAAGCAACAAGTCTTGTAAGCGTAAAATTACTAGCCATCAAAATTCTGATGGAAAGTTGAAAATTTTAAAGTTTGACCGTGCTGATTATCTTGGCGTTGAAAATGTTCCAGTGAAGAGTTATGGTTATTGGGAAGGGACTGGAATAACACAAACTGGTCTCCCATCATTGCCCGATTCTTCCTTCTTGTTAGCTAAATATCCTGCTGCCTTCAGCAATTATCCTACATCATCTTCCACTTTGGAGCAACAACCATTGCAGGCGTTTGGTGCATCTACTTTTACTGCTAGAGACATCAATGGAAGCAATGCCATGATTGACTGTCCGATGTTTATAAGTAGGGATGGTCCGAAAGTGCAGCCATTTATAGTAGATGTCAAGCACAGCCAAGATGTATTCTCTGAGATGCAGAGAAACAGTTTTGAAGCAATATCTAGTTTGCAGCAGCATGGAATAGGAGTGATGGGAATGAATGGCGTTGGAAGACCTGGGATTCTAGTGGGTGGGTCATGCAGTGGTGTCTCTGATCCTGTAGCAGCAATCAAAATGCATTATTCTAATTCCGAGAAGTATGGTGGTCAGAACGGGAGTATCTTGAGAGATGATGAATCTTGGGGAGGGAAAGGGGACATAGGCAGGTAG 5037 0.4205 MPPEPLPWDRKDFFKERKHERSESVGSVARWRDSSHHRDLNRWGSTEFRRPPGHGKQGGWHMYSQEPGHGYGVSRSGDKMLEEDSRPSASRDGKYGRSSRDNRGSSGHRDWRGHSWEATNGSPNLSRRPSDMNSDRRSVDDSTTYSSHPHSDSVNTREQHQLKDLHDKMGAVNELGAAPRCDKENSSIDWKPLKWNRSGSLSSRGSGFSHSSSSRSMAGTDSNEAKPDLKPKNITAIESHSGEGTACVTSSMPSEDTASRKKPRLNWGEGLAKYEKKKVERPDAGANKDGSVSSAGNMEPCNFISSNLVDKSPKVTGFSDCASPATPSSVACSSSPGVDDKLLEKIANADNNLSNSSDSPATGFRNHLQKFYLNLDKLDIDSLNNLGSSIVELVQSDDPSSEDSCLVRSNAIKTLLIWKADISKVLEVTESEIDLLENELKSLKSDSVDRYQSPEALGSQQADSSIKIYEEQEVSQKVIRPVPLKIISSDEPNIEKMPLSTNLCSIHDNDKEEDIDSPGSATSKFVEPLPLVKAVSSRDTGGYDNLSRDMDTVQSTSMKCLVRCTTRKDPSVSACNDFNTPMDVKETFGANTCSIYEDTYNSIIASNKESANKAHGVFAKLVPNDCKKLVNMGVSNDSSCHTFVMEKFAEKKRLEKVKEKVAALKFKALHHLWKEDMRLLSIKKCRPKSHKKNEPSSSNLKNRSSIRSRFPFPGGNHLSLVPTSELIDFASKLLSKSQTQIQRNTLKMPALILDEKEKMVTRFISSNGLIEDPLATEKERNMINPWTSEEKEIFLEKFAVFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFQKLKTKDVGKLGKSYAARTNLMASGITWNHEVNVSSFDILSAASLMADDIAGNKRMRAGRFLLEGFDNIKSSRGGDSIIERSNSPDTLGDERETAAAADVLAGICGSFSSEAMSSCITNSIDPVDGNKEREFLKANPLRNQTLTPDISQNADDETCSDESCEEVDLSGWTDDEKAAFLQAVSSFGKDFTKIAQCVGTRSREHCKVFFSKTQKCLGLNLVRPIPGIVGSPPNDDANGGESDTDDACLVKAGSVVDADKSGNKTDEDLPSDALNTFHGESNPLEVRSLSAELNESREITGTEVHLENVDMVSDVCAIKVETRPGSDDSGVSLGKTDKSCSVNEHPVKITSDSIEVAKGKTNKLGDAVRESISTVGIIKPLECGSVAMDTTVSEGSSGDLRNEVERRQRVAAPPCSDDRDDKHEADAGVAVESKSCVLESSTTANLSFSHVANSCSGLSFGSENKHVSFGKPHASALSTNNSWATTNSLLLNAAAAPCEKAISQDRLSSNCDVQRGRDMGCHSSGSNGDHQFPLPCNHLETVSILQGYPLQVPVKKEVDGDVNCSSSVTEFPFPQKVKQTDDHFKTLWHSSDSENTSRNGNVKLFGKIITNPSSSQKPNLITKGSEENGTHHHPKSSNKSCKRKITSHQNSDGKLKILKFDRADYLGVENVPVKSYGYWEGTGITQTGLPSLPDSSFLLAKYPAAFSNYPTSSSTLEQQPLQAFGASTFTARDINGSNAMIDCPMFISRDGPKVQPFIVDVKHSQDVFSEMQRNSFEAISSLQQHGIGVMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSEKYGGQNGSILRDDESWGGKGDIGR 1678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi49g00031 1678 ProSiteProfiles SANT domain profile. 997 1048 IPR017884 -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 1229 1256 - -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 1089 1109 - -
Vivi49g00031 1678 SUPERFAMILY Homeodomain-like 999 1048 IPR009057 -
Vivi49g00031 1678 SMART sant 782 830 IPR001005 -
Vivi49g00031 1678 SMART sant 998 1046 IPR001005 -
Vivi49g00031 1678 Gene3D - 762 834 - -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 191 221 - -
Vivi49g00031 1678 Gene3D - 960 1053 - -
Vivi49g00031 1678 Pfam Myb-like DNA-binding domain 785 826 IPR001005 -
Vivi49g00031 1678 Pfam Myb-like DNA-binding domain 1002 1041 IPR001005 -
Vivi49g00031 1678 ProSiteProfiles SANT domain profile. 781 832 IPR017884 -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 8 45 - -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 1657 1678 - -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 1439 1478 - -
Vivi49g00031 1678 CDD SANT 1002 1040 IPR001005 -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 76 115 - -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 153 170 - -
Vivi49g00031 1678 SUPERFAMILY Homeodomain-like 769 830 IPR009057 -
Vivi49g00031 1678 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1677 - -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 1439 1455 - -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 687 708 - -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 1 269 - -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 238 256 - -
Vivi49g00031 1678 Coils Coil 419 446 - -
Vivi49g00031 1678 MobiDBLite consensus disorder prediction 1222 1256 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi49g00031 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi49g00031 - - psat:127097984 2866.64