Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi49g00030 ATGGGTTGTTTTTATTATGCCATATTCTTTGTTTTGTTTCTATCCATTGAAAATTCTTTGGCTTCTTCTATTGAAGATCAGAAGAGAGATAAGATAGGTTGGTTACCAGGGCAACCAGGGAATGTTGGATTTGAACAGTATTCAGGTTATGTGACTGTGAATGAACAGAATGGAAGAGCACTGTTTTACTGGTTGACTGAAGCACCACTGAGCCGTGGACCCAATTCAAGGCCACTGGTTTTGTGGCTTAATGGTGGTCCTGGTTGTTCTTCTATTGCTTATGGTGCTTCTGAGGAGATTGGCCCTTTTCATATTAAGTCTGATGGCAAATCACTTTACTTGAATCCTTATGCTTGGAACAAATTGGCAAATATACTGTTTCTTGATTCTCCCGCCGGTGTTGGTTTTTCTTATTGTAATAAAACAGCAGATCTGTACACATTTGGTGACAAGAAAACAGCTGAGGATGCATATATTTTTCTTGTAAATTGGTTTGAAAGATTTCCTCAGTATAAACATAGAGATTTCTACATTGCTGGAGAAAGTTATGCAGGTCATTATGTTCCTCAATTGGCTCAACTTGTTTACCAGAGAAATAAGGGAATCAATAATCCAGTTATGAATTTTAAGGGAATTATGGTTGGAAATGGTGTTACTGACGATTATCATGATTATATCGGAACATTTGAGTACTGGTGGACACATGGTTTGATTTCCGATTCCACATATAAAATTCTAAGAGTTGCATGTGACTTTGGATCGTCTCAGCATCCATCCGTGCAATGTATGCAGGCTCTTAGACTCGCAGTTGCTGAGCAAGGAAACATTGATCCATATAGCATTTATACACCGCCTTGTAACAATACGGCGTCGCTTAAACGCAGCTTGAAGGGTCGTTATCCATGGATGTCAAGAGCATATGATCCGTGTACTGAAAGGTATTCTGATTTGTATTTCAATCGTCCAGATGTTCAGAAGGCACTTCATGCCAATGTAACAGGGATTCCATATATATGGAAAACTTGCAGTGATATTGTTGGGAATTATTGGACTGATTCGCCGTTGTCTATGCTTCCTATATATCATGAACTTATCAATGCTAGTCTACGGATATGGGTATTCAGTGGAGACACTGATTCTGTAGTTCCACTAACCGCCACTCGATATTCTATTGACGCATTGAAGCTTCCAACCATCGTCAATTGGTATCCTTGGTATGACAGCGGCAAGGTTAGTGGATGGAGCCAAGTTTATAAAGGGCTCACATTCGTGACAGTAAGAGGCGCTGGACACGAGGTTCCTCTTCATAAACCACGCCAAGCGTTTATTCTTTTTAGATCATTCTTGGAGAACAAGTACATGCCATCATCAAGTTAA 1377 0.398 MGCFYYAIFFVLFLSIENSLASSIEDQKRDKIGWLPGQPGNVGFEQYSGYVTVNEQNGRALFYWLTEAPLSRGPNSRPLVLWLNGGPGCSSIAYGASEEIGPFHIKSDGKSLYLNPYAWNKLANILFLDSPAGVGFSYCNKTADLYTFGDKKTAEDAYIFLVNWFERFPQYKHRDFYIAGESYAGHYVPQLAQLVYQRNKGINNPVMNFKGIMVGNGVTDDYHDYIGTFEYWWTHGLISDSTYKILRVACDFGSSQHPSVQCMQALRLAVAEQGNIDPYSIYTPPCNNTASLKRSLKGRYPWMSRAYDPCTERYSDLYFNRPDVQKALHANVTGIPYIWKTCSDIVGNYWTDSPLSMLPIYHELINASLRIWVFSGDTDSVVPLTATRYSIDALKLPTIVNWYPWYDSGKVSGWSQVYKGLTFVTVRGAGHEVPLHKPRQAFILFRSFLENKYMPSSS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi49g00030 458 SUPERFAMILY alpha/beta-Hydrolases 29 455 IPR029058 -
Vivi49g00030 458 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Vivi49g00030 458 FunFam Carboxypeptidase 357 451 - -
Vivi49g00030 458 Gene3D - 357 450 - -
Vivi49g00030 458 FunFam Carboxypeptidase 307 454 - -
Vivi49g00030 458 ProSitePatterns Serine carboxypeptidases, histidine active site. 421 438 IPR033124 GO:0004185
Vivi49g00030 458 FunFam Carboxypeptidase 26 288 - -
Vivi49g00030 458 Gene3D alpha/beta hydrolase 26 288 IPR029058 -
Vivi49g00030 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Vivi49g00030 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 421 434 IPR001563 GO:0004185|GO:0006508
Vivi49g00030 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Vivi49g00030 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Vivi49g00030 458 Pfam Serine carboxypeptidase 36 451 IPR001563 GO:0004185|GO:0006508
Vivi49g00030 458 Gene3D - 310 346 - -
Vivi49g00030 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 438 IPR001563 GO:0004185|GO:0006508
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi49g00030 320 452 Calmodulin-binding Proteins AT2G22960 28.358 3.91e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi49g00030 K16297 - gmx:100805722 837.025