Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi49g00029 ATGTATTTCAGTAGAATAATGAGTTATTATTATTCCATATTCTGTGTTGTTTTGTTTCTATCCAATGGAATTTCTTTGGCTTCTTCAATTGAAGATCAAAAGAGAGATAAGATAAGTAGATTACCAGGGCAACCAGAGAATGTTGGATTTGAACAGTATTCAGGTTATGTGACTGTGAATGAACAGAATGGAAGAGCACTGTTTTACTGGTTGACTGAAGCACCACTGAGCCGTGAACCGAATTCAAGGCCACTGGTTTTGTGGCTTAATGGTGGTCCTGGCTGTTCTTCTATTGCGTACGGTGCTTCTGAGGAAATTGGCCCTTTTCATATTAAGTCTGATGGCAAATCACTTTACTTGAATCCTTATGCTTGGAACAATTTGGCAAACATTCTGTTCCTTGAGTCTCCTGCTGGTGTTGGTTTTTCTTACTGTAATAAAACAGAAGATATGCACACATTTGGCGACCAGAAAACAGCGGAAGATGCATATATTTTTCTTGTTAATTGGTTTGAAAGGTTTCCTCAATATAAGCATAGAGAATTCTACATGGTCGGCGAAAGTTATGCAGGTCATTATGTTCCTCAACTGGCTCAAATCGTTCACCAGCGAAACAAGGGAATCATTTATCCAATTATAAATTTTAAGGGATTTATGGTTGGAAATGGCGTGACTGATGATTATCATGATTACGTTGGTACATTCGAGTACTGGTGGACACATGGTTTGATTTCAGATTCCACGTATAAGATGCTAAGAACTGCCTGTGATTTGGGGTCCTTGCAGCATCCATCAGCACAATGTTTGCATGCTCTTACAGTGGCACAATCTGAGCAAGGAGAAATTGATGGATATAGCATTAATACACCACCTTGTAACGAAACATCATCATCGCTTAGACGCGGCTTGAACGGTCGTTATCCATGGATGTATAAAGCATATGATCCATGTACTGAAAGGTATTCGGATGTGTATTTCAATCGTCCAGAAGTTCAGAAGGCCTTTCATGCCAATGTAACAGGAATTTCTTATGCATGGAAGGCATGCAGTCATGTTCTTTGGAATTATTGGTCTGATTCTCCATTGTCTATGCTTCCTATATATCAAGAACTTATTAACGACGGTCTCCGAATATGGGTATACAGTGGAGACACTGATGCTGTACTTCCACTCACTGCAACTCGATATTCTATTGCTGCTTTGAAGCTACCAACCGTCATCAATTGGTATCCTTGGTATGATAATGGCCAGGTTTGTGGATGGAGCCAAGTTTATAAAGGACTCACATTCGTGACAGTAAGAGGCGCTGGACACGAGGTTCCTCTTCATAAGCCGCGCGAAGCGTTAATTCTTTTTAGATCATTCTTGGAGAACAAGCATATGCCATCATCAAGTTAA 1398 0.4006 MYFSRIMSYYYSIFCVVLFLSNGISLASSIEDQKRDKISRLPGQPENVGFEQYSGYVTVNEQNGRALFYWLTEAPLSREPNSRPLVLWLNGGPGCSSIAYGASEEIGPFHIKSDGKSLYLNPYAWNNLANILFLESPAGVGFSYCNKTEDMHTFGDQKTAEDAYIFLVNWFERFPQYKHREFYMVGESYAGHYVPQLAQIVHQRNKGIIYPIINFKGFMVGNGVTDDYHDYVGTFEYWWTHGLISDSTYKMLRTACDLGSLQHPSAQCLHALTVAQSEQGEIDGYSINTPPCNETSSSLRRGLNGRYPWMYKAYDPCTERYSDVYFNRPEVQKAFHANVTGISYAWKACSHVLWNYWSDSPLSMLPIYQELINDGLRIWVYSGDTDAVLPLTATRYSIAALKLPTVINWYPWYDNGQVCGWSQVYKGLTFVTVRGAGHEVPLHKPREALILFRSFLENKHMPSSS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi49g00029 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Vivi49g00029 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Vivi49g00029 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Vivi49g00029 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Vivi49g00029 465 FunFam Carboxypeptidase 32 294 - -
Vivi49g00029 465 SUPERFAMILY alpha/beta-Hydrolases 34 461 IPR029058 -
Vivi49g00029 465 Pfam Serine carboxypeptidase 42 458 IPR001563 GO:0004185|GO:0006508
Vivi49g00029 465 Gene3D - 364 457 - -
Vivi49g00029 465 Gene3D - 317 354 - -
Vivi49g00029 465 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
Vivi49g00029 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 445 IPR001563 GO:0004185|GO:0006508
Vivi49g00029 465 FunFam Carboxypeptidase 364 458 - -
Vivi49g00029 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Vivi49g00029 465 FunFam Carboxypeptidase 314 461 - -
Vivi49g00029 465 Gene3D alpha/beta hydrolase 32 294 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi49g00029 327 459 Calmodulin-binding Proteins AT2G22960 29.104 2.47e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi49g00029 K16297 - gmx:100805722 791.186