Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi499g00003 ATGGCTCATCAATCACCTTCCTCTCTCTTCTTTGAGTGTCCATGTACCTATGATGTATTCCTCAGTTTTAAAGGCACTGATACTCGCTTCGGTTTCACAGGAAATCTTCACAAAGCTCTTTCTGTTAAGGGAATAAACACCTTCATTGATGATAAGAAGCTTCGAAGTGGTGACGAAATTACACCATCACTTGTGAAGGCCATTGAAGACTCAAGGATTTTCATCCCAGTGTTGTCTATTAATTATGCTTCTTCTTCGTATTGTTTAGACGAACTTGTCCACATGATTCACTGCTCCAAGGAAAATGGGCGTCTGGTTTTGCCTGTTTTCTACGACGTGGATCCTTCTCATGTGAGACATCAGTCCGGAAGCTATGGCAAAGCTATAGCTAAGCATAAAAAGAAGTTTACAAAAAACAAGAAACAGTACACGCAACCCATAAATATCATTCTCATACTCTTCTTACTTGCTCTAGTTCTTCTCTATTCTCATGGCTCAACCATCACCTTATTTCTTCCCCTCTTAATTCTCCTCATCTTTCTTCTCCAAAATAACAAGAAAGGTTATACTGATGGTATGAATAGGTTGGAAAAATGGAAGATAGCTCTTAACCAAACAGCTAACTTATCAGGCCATCATTTCAATCCAAGAACCAAATATGAGCACGAGATTATTGAGAAGATAGTCAAAGAAGTCTTCAACAAGATTTATCGTGCTCGTCTCCATGTTGCCAATTACCCTGTTGGATTAGAGTCTCGAGTGCTTCACATGAAATCGCTGATGGATGTTGGATGTGATCGTGGAGTCTATATGGTGGGGATTTATGGGACAGGTGGGATGGGCAAATCAACACTTGCAAGAGCAACTTTTAATTTCATTGCTGATCAATTTGAATGCTTGTGTTTTCTTCATAATATTAGAGAAAATTCAGATCAAAATGGCTTAAAGTATCTCCAGGAGGAGCTCCTTTTCAAAACAGTTGGACTGGATGTTATATTGGGAGATGTAAGTGAGGGAATTCCAATCATAAAAAGAACACTATGCCAAAAGAAGGTTCTTTTAGTTCTTGATGACATTGACAAACTCGAGCAGTTGTGGGCTTTGGCCGGAGAACTTGATTGGTTTGGTCAAGGTAGCAGAGTCATCATTACTACTCGAGACAAACGCTTGCTATCTTGTCACATGATTAAAAGAACATGTGAAGTAGATGGGTTGAATGAGGAAGAATCTTTTGAACTGCTGAGGTGGATGGCATTTAAAACTGAAAATGTTGATTCAAGTTATGCAAATGTTTTAAATCGTGCAGTAACTTATGCTTCTGGTCTTCCATTAGCTTTAGAAGTAGTTGGTTCCAACTTGTTTGGAAAATGTATAGAAGAATGGAAAGATTTATTAGATGAGTATGAGAAGATTCCCAATAAAGATATCCATGAGATACTTAAAGTAAGCTTTAACAATTTGAAGGAAATCGAGCAAAGTGTTTTTCTCGACATTGCTTGTTGCTTCAAAGGATATGATTTGGTAAAGGTTCAAGAGATACTTCTTGCGCATTATGGTTGCTGCAAGAAGCATCAAATTGAAGTGTTAGTTCAAAAATCACTCATTAAGTTTAGTTTGTTTAGTACTGTGACATTACATGACTTGATTGAAGATATGGGTAAAGAAATTGTCCGACAAGAATCACCCGAAGAACCTGGGAAACGCAGCAGATTGTGGTTTTATGAAGATATAATACATGTTTTAGAACAAAATACTGGAACAGATCGAATTGGAGTTATATATCTGAGTTTCCCATCATTTGAAGAAGAAATAGTAGAATGGGAGGGAGATGAGCTGAAAAACATGAAAAACCTCAAAACACTCATTATAAAGAATGGTTTCTTTTCTAAAGGTCTCAAGCATCTTCCAAACAGTTTAAGAGTACTAGATTGGTGTAAATATCCTTCAGCTGATATACCATCCAATTTTTGTCCAAAGAAACTTTCCATATGCAAACTGAGTGAAGGTTGCCTAACATCATTTGAGTTATCAAGAACATTAAAGGGGTTCTTAAATATGAGAGAATTAAATTTAGAAAGTTGTCAATCTTTAACATGCATTAATGATGTATCTGGTCTCCCAAATTTAGAAAAATTCATATTTCAAAATTGTGAGAATTTAGTTACAATTCATGCTTCTGTTGGGTTTCTAAATAAACTAAAAATATTGAATGCTGAGGGCTGCAGCAAACTTAGAACTTTTCCTCCCATAAAGTTGGCTTCTCTTCAAGTGTTGAGACTTCAATATTGTAAAAATCTCAAGAGATTTCCAGAAATATTACAAGAGATGGAGAACATAGAAGCCATTGTTTTAGAGGGCACTTCCATTGAAGAACTGTCATTTTCATTTCAAAATTTCACCGGGCTATGTACATTACGAATATGGGGAAATGGAATACTTACATTACCAAGTAGCATTCTCATGCTTCCAAGTTTGTCCTGGATTATGGTTGAGGATTGTATATTCTTGCCAATAAAAAATGATAAACTGATGAGCCCAAAAATGTCTTCAAAAGTACAAAATCTCATCCTCCAAAATTGCAACATATCAAATACATTTCTTTCAATAATTATCAAGTGGTTTGCTGATTTGAAATATTTAGACCTATCAAGGAATGATTTCACAATTCTTCCTGAATGCCTCGTAGAATGTAGCTTTCTAAGTAGCATTGTTTTGGACGGTTGCAAGTTTCTTAAGGAAATTAGAGGGATTCCGCCAAATCTATACACATTGTCTGCATTACAATGTGAATCATTGAATTCCACAACTAGGAGCATGCTACTGAACAAGAAGCTACATGAGGCTAGACACACAAATATTTGTATTCCAAGGGGGAGTGAGGGGATTCCAAAGTGGTTCGAGCACAAAAGTAGAGGAATTGAGAGGGTTCCGCAGTGGATCGAGAATGATAACAGAGGACTAACAATGTCTTTCTGGGTTCGAAACTGGTCGCCTTCCATAACTTTCTTCTTTTCAACTAAATGGATGCATAACAAGGGCCCTATCATTAAAGATCTTGATGTAGAATTTGATCTGTCGGTCAATGGCCATGCTTGTTCCGGGCTAAAACTGTGGATCCACTCGACACATGTATTTCAACTTAATCTGAATTGCGGAAAACCTATATTGGATAGAGAACAATGGATCCATGTCGAGCTTGAGGTTAAGTGTACTCTGACATCGAGACATCTTAATGACAAGGTAATGAAATCAATCAGCACAGAAATGGGAATCCATATGTTGAAGGAGAAAAGCATAGTTGATGATATCAAATTCACTAATCCTTATAGAAAGAGAAAGTTAGATGAATATCTCAATAATTCACAATCACAGTTTCACCCACTGCTGAAAAAGCAAAGATCATGA 3405 0.3668 MAHQSPSSLFFECPCTYDVFLSFKGTDTRFGFTGNLHKALSVKGINTFIDDKKLRSGDEITPSLVKAIEDSRIFIPVLSINYASSSYCLDELVHMIHCSKENGRLVLPVFYDVDPSHVRHQSGSYGKAIAKHKKKFTKNKKQYTQPINIILILFLLALVLLYSHGSTITLFLPLLILLIFLLQNNKKGYTDGMNRLEKWKIALNQTANLSGHHFNPRTKYEHEIIEKIVKEVFNKIYRARLHVANYPVGLESRVLHMKSLMDVGCDRGVYMVGIYGTGGMGKSTLARATFNFIADQFECLCFLHNIRENSDQNGLKYLQEELLFKTVGLDVILGDVSEGIPIIKRTLCQKKVLLVLDDIDKLEQLWALAGELDWFGQGSRVIITTRDKRLLSCHMIKRTCEVDGLNEEESFELLRWMAFKTENVDSSYANVLNRAVTYASGLPLALEVVGSNLFGKCIEEWKDLLDEYEKIPNKDIHEILKVSFNNLKEIEQSVFLDIACCFKGYDLVKVQEILLAHYGCCKKHQIEVLVQKSLIKFSLFSTVTLHDLIEDMGKEIVRQESPEEPGKRSRLWFYEDIIHVLEQNTGTDRIGVIYLSFPSFEEEIVEWEGDELKNMKNLKTLIIKNGFFSKGLKHLPNSLRVLDWCKYPSADIPSNFCPKKLSICKLSEGCLTSFELSRTLKGFLNMRELNLESCQSLTCINDVSGLPNLEKFIFQNCENLVTIHASVGFLNKLKILNAEGCSKLRTFPPIKLASLQVLRLQYCKNLKRFPEILQEMENIEAIVLEGTSIEELSFSFQNFTGLCTLRIWGNGILTLPSSILMLPSLSWIMVEDCIFLPIKNDKLMSPKMSSKVQNLILQNCNISNTFLSIIIKWFADLKYLDLSRNDFTILPECLVECSFLSSIVLDGCKFLKEIRGIPPNLYTLSALQCESLNSTTRSMLLNKKLHEARHTNICIPRGSEGIPKWFEHKSRGIERVPQWIENDNRGLTMSFWVRNWSPSITFFFSTKWMHNKGPIIKDLDVEFDLSVNGHACSGLKLWIHSTHVFQLNLNCGKPILDREQWIHVELEVKCTLTSRHLNDKVMKSISTEMGIHMLKEKSIVDDIKFTNPYRKRKLDEYLNNSQSQFHPLLKKQRS 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi499g00003 1134 Pfam NB-ARC domain 258 490 IPR002182 GO:0043531
Vivi499g00003 1134 Pfam TIR domain 17 141 IPR000157 GO:0007165
Vivi499g00003 1134 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 785 IPR044974 GO:0006952
Vivi499g00003 1134 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 138 IPR035897 -
Vivi499g00003 1134 SUPERFAMILY "Winged helix" DNA-binding domain 475 582 IPR036390 -
Vivi499g00003 1134 Gene3D Ribonuclease Inhibitor 776 950 IPR032675 -
Vivi499g00003 1134 Gene3D Ribonuclease Inhibitor 588 775 IPR032675 -
Vivi499g00003 1134 PRINTS Disease resistance protein signature 439 453 - -
Vivi499g00003 1134 PRINTS Disease resistance protein signature 346 360 - -
Vivi499g00003 1134 PRINTS Disease resistance protein signature 271 286 - -
Vivi499g00003 1134 PRINTS Disease resistance protein signature 750 766 - -
Vivi499g00003 1134 ProSiteProfiles TIR domain profile. 15 236 IPR000157 GO:0007165
Vivi499g00003 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 239 498 IPR027417 -
Vivi499g00003 1134 Gene3D - 16 235 IPR035897 -
Vivi499g00003 1134 SMART till_3 16 153 IPR000157 GO:0007165
Vivi499g00003 1134 Gene3D - 236 398 IPR027417 -
Vivi499g00003 1134 Gene3D - 404 495 IPR042197 -
Vivi499g00003 1134 SUPERFAMILY L domain-like 603 952 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi499g00003 17 977 WRKY Transcription Factor Family AT4G12020 26.423 1.73e-64 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi499g00003 - - psat:127085544 2110.88