Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi498g00023 ATGGCGCCCAATCCGAAAGTAGTAGCGGCCTATCGTGCCATGTCAAGTCTTGGGATTTCTGAATCACAAGTGAAACCGGTGTTGAAGAAACTTCTCAAATTATATGATAAAAACTGGGAACTTATTGAGGAAGGCAACTATAGAGCTCTTGCAGATGCTATATTTGAAGGCGATGCTTCTGAGGAGCCTGAACATCATAAGAAAAACAAGAGAGTTCATGAAGAAGAGGCGGAGGCTGAAGAAGCTCTTATAAATGTTGAACCTGTTCAACCTTTGAAAAGGTTGAGATTAAGAGGACAAGAGATCAATTCCCCTAGTTCAGCTCCTTCCCCATCAAAGAAGCCTCACATTGAAAAGGTCACAGCACTTGAGGGCAGCTCTGCACAGAAGCATCAAAACAAAGCAGTGTCATCTGATGGAAACACGAGGAGTGCAGCACGTCCAGGTCCCATGCCAGATGCTAGTTCTGACAGAGGAAAGCAACCTGCATTGCCTCAAGATTCTCTTAGAGGGAGAAAACCTATATATGAAAGAGTATCTCCAGCTAAACAAACAACAGTTCAACCTGGAAGGCCTGTGTTACCAAGCAACCAAATGCCTCATGCCAATGCATTGATCGTACCTAAAGATGAGCCCGTTGATGAAGTGCCTGATTATGAGCTTCCCATTGCAATGATTCCTCCTGAACCATCAAGTTCAAGGCATTCAATGAAGAGTGGTATTACTAGAAAGCAAGGTGGCCATGTCTCTGAGACATCATCACAGCACAAAAATGGAGTTAGAGATAAAGAAGTGGCTTCTGATATTGTGATAGCCTCTTCAGCTCAGGGAGAAGTAAAACTTTCTCTGAGCTACAGCTCAGCTCTGCAAGGACCAAATTTTTGCATGCCTACTCAGGAACAGCTTCTGAAAATGATGGAGGATAGATGTCTGCGATCATACAAAATCACTGACCCAAATTTTTCTGTCGCGAAAATATTGAGGGATATGTGTGATTGCATGTTGGAATTCAGTACTGATTCAAATGATAACTCACAAGAAAGTTCTAAGACAAGACCAACCATTGATGAATTGAAGGATTCAGAGGCTAATGGCACTCCTGGTGTTGGGGGAAGTAAGGATTTGGACATGGGTTCTCACTCATCAAATGGATCAATCCAAGTTAATTCTTTTTCTGCCTTGGTTACCCCTCGAGGCCCCAATTCGCCAGCCCTTCAGAGCGGTTTGGATGATGCTGCAGTGATTTCGAAGATGAACATTTCAAATGATATTCCCCAAAGTGATGTTGGAATACAGCCGGAGGATCCCATGTCTCCAAATTTACACAGTTTAGTAGTCGTTCCACATCATCAGCTTACAGTAGATGATATAAGGTCTTTTCATGATGTTAATGACATTACAAAAGGAGAAGAGATTAATCAAATTCCATGGGTGAATAAAACTACTAATGATTCCCCATCACCTTTCAACTACATACCCCAAAACCTTGTATTTCAAGATGCTTATGTTAACATTTCTCTATCACGTATTGGGGCTGAGGACAGTTGTCCTTGTATAGGAAGTTGTGTCTTGTTGTCAACACATTGTGCCTGTACAGATAAAACTGGGGGTGGATTTGCATATACTGCTCAAGGCCTACTGAAGGAAGAATTTTTGGAAGAGTGCATTGCTATCAGTCACAACCCTCGACAACATTCCTTTTATTGCAAAGATTGCCCACTTGAAAGGTCTAAGAGTAATGGTTATTTGGAACCATGTAAAGGACACTTAGAGAGAAAGTTTATTAAAGAATGCTGGAGAAAATGTGGCTGTGGGAAACAATGTGGCAATCGCCTTATCCAGCGAGGAATAACATGCAACTTGCAGGTATTTTTCACTTCCGAAGGAAAAGGATGGGGTCTTCGTACTTTAGAGGACCTGCCAAAAGGAGCATTTGTATGCGAGTTTGTCGGAGAAATCTTAACAATAAAAGAGTTGCATGAGAGGAACATAAAATGTGCTGATAATGGGAAATCTACTTACCCAATTCTTTTGGACGCGGATTGGAATTCAGGATTTGTGAAAGATGAAGAAGCTCTATGCTTAGAAGCAGCGTCCTTTGGGAACATTGCTAGGTTTATTAATCACAGATGTTCTGATGCAAACTTGGTTGAAGTACCAATTCAAATCGAGTGTCCAGATCGTTATTACTATCATCTTGCTCTTTTCTCTTCCAGAAAAATAGCAGCGCAGGAAGAACTCACTTGGGATTATGGCATTGACTTTGACGACCATGATCAACCTGTCAAACTGTTCGAGTGCAAATGCGGCAGTAAGTTCTGCAGGAATATGAAGCGATCAAACGGATCCATTTGA 2355 0.4178 MAPNPKVVAAYRAMSSLGISESQVKPVLKKLLKLYDKNWELIEEGNYRALADAIFEGDASEEPEHHKKNKRVHEEEAEAEEALINVEPVQPLKRLRLRGQEINSPSSAPSPSKKPHIEKVTALEGSSAQKHQNKAVSSDGNTRSAARPGPMPDASSDRGKQPALPQDSLRGRKPIYERVSPAKQTTVQPGRPVLPSNQMPHANALIVPKDEPVDEVPDYELPIAMIPPEPSSSRHSMKSGITRKQGGHVSETSSQHKNGVRDKEVASDIVIASSAQGEVKLSLSYSSALQGPNFCMPTQEQLLKMMEDRCLRSYKITDPNFSVAKILRDMCDCMLEFSTDSNDNSQESSKTRPTIDELKDSEANGTPGVGGSKDLDMGSHSSNGSIQVNSFSALVTPRGPNSPALQSGLDDAAVISKMNISNDIPQSDVGIQPEDPMSPNLHSLVVVPHHQLTVDDIRSFHDVNDITKGEEINQIPWVNKTTNDSPSPFNYIPQNLVFQDAYVNISLSRIGAEDSCPCIGSCVLLSTHCACTDKTGGGFAYTAQGLLKEEFLEECIAISHNPRQHSFYCKDCPLERSKSNGYLEPCKGHLERKFIKECWRKCGCGKQCGNRLIQRGITCNLQVFFTSEGKGWGLRTLEDLPKGAFVCEFVGEILTIKELHERNIKCADNGKSTYPILLDADWNSGFVKDEEALCLEAASFGNIARFINHRCSDANLVEVPIQIECPDRYYYHLALFSSRKIAAQEELTWDYGIDFDDHDQPVKLFECKCGSKFCRNMKRSNGSI 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi498g00023 784 SMART preset_2 463 603 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi498g00023 784 CDD SET_SETDB-like 487 752 - -
Vivi498g00023 784 Pfam Pre-SET motif 466 611 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi498g00023 784 MobiDBLite consensus disorder prediction 125 144 - -
Vivi498g00023 784 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 780 IPR025776 -
Vivi498g00023 784 SMART set_7 619 758 IPR001214 GO:0005515
Vivi498g00023 784 MobiDBLite consensus disorder prediction 58 79 - -
Vivi498g00023 784 SUPERFAMILY SET domain 475 775 IPR046341 -
Vivi498g00023 784 Gene3D - 1 59 IPR043017 -
Vivi498g00023 784 MobiDBLite consensus disorder prediction 337 383 - -
Vivi498g00023 784 MobiDBLite consensus disorder prediction 123 198 - -
Vivi498g00023 784 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 781 - -
Vivi498g00023 784 ProSiteProfiles Pre-SET domain profile. 514 616 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi498g00023 784 ProSiteProfiles SET domain profile. 619 752 IPR001214 GO:0005515
Vivi498g00023 784 Pfam Ubiquitin-binding WIYLD domain 6 57 IPR018848 -
Vivi498g00023 784 MobiDBLite consensus disorder prediction 58 86 - -
Vivi498g00023 784 MobiDBLite consensus disorder prediction 225 262 - -
Vivi498g00023 784 MobiDBLite consensus disorder prediction 232 254 - -
Vivi498g00023 784 Gene3D SET domain 465 777 IPR046341 -
Vivi498g00023 784 Pfam SET domain 631 752 IPR001214 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi498g00023 595 752 C2H2 Transcription Factor Family AT2G23740 43.125 1.27e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi498g00023 Pre-SET 6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi498g00023 - - gmx:100778335 1020.38