Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi498g00017 ATGGCCTCAAAAGCTTTAACCAGTGGTTCTCACTCCCGAAATGGTTACCGTTTCTCAGTCTTTGATGACTCGGATGAGGAAAATGGAGACTTCAATATTCAACAACAAAGGAAACACAATGATCATGCTTTCTCTTTGGCTGGAAGCGTAGCTAGTAAGGAATTTGAAGAGCAGAAATCATTCAACTATAATGAAGAGAAAGGGAAAGGAAATCAAGAAAAGAGAAGTCTTATGAGCAATGACATAGGAGATGATGAATACCTTTTGTCTGAGTCGAGGCAACCATTATGTCGCAAAGTACCAATAGCTTCGAGCCTAATCAATCCATACCGCATAGTCATAGTCATGCGTCTCGTTGTCCTAGTTTTCTTCTTCCACTTCCGCATCACAACGCCTGTGCACGATGCATTTGCCTTATGGATAATCTCGGTGATCTGCGAAATATGGCTCTCTTTGTCTTGGGTGATAGACCAATTCCCCAAGTGGTTCCCCATGACTCGCGAAACTTACTTGGAGCGCTTGTCTATGAGGTTCGAGCGTGAAGGAGAGCCGAACCTTTTAGCCGCAGTTGATGTCTTTGTTACCACTGCAGACCCTTTGAAGGAACCACCGATAGTAACAGCAAACACAGTACTATCAATCTTGTCTGTTGATTATCCTGTTGACAAAGTTAGCTGCTACGTCTCCGATGATAGTGCTTCTATGCTTCTCTTTGATACTTTGTCACAAACTTCTCAGTTTGCAAGAATATGGATTCCATTTTGTAAAAAGTACAACATTGAGCCAAGAGCTCCCGAGTCTTATTTTTCTCAGAAAGTTGATTACTTGAAAGACAAGGTACTTCCAACATTTGTAAAGGACCGCAGAGCTATGAAGAGAGAGTATGAAGAATTCAAGGTGAGAATTAATGTACTTGTTGCAGATTCTCAGAAAAAACCAGAAGAGGGGTGGGTGCTGCAAGATGGTACTCCATGGCCTGGGAATAACACTGACAATCATCCAGGAATGATTCAGGTATGTTTGGGAAGTGCTGGTGCTGTAGACAATGAAGGCAAGTCACTTCCGCGGCTTGTATATGTTTCGCGCGAGAAATGTTCTGGCTATCAACACCATAACAAAGCTGGAGCAATGAATTCTCTGCTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGTGTTGAATCTGGATTGTGATCAATACATCAATAATTGCCAGGCTATTAGGGAAGCTATGTGCTTCCTCATGGACCCTCTACTTGGAAAAAAGACCGCTTATGTCCAATTTCCGCGAAGGTTTGATGGCATCGACAACAATGATAGATATGCTAATCACAATACTGTATTCTTTGATATCAACATGAAATGCCTTGATGGAATTCAAGGTCCAGTTTATGTTGGTACTGGATGTGTGTTCAACAGACAGGCATTATATGGCTATAAGCCACCAACCGAAAAAAGGCAAAAGACGGGCTTTTCATGCTGCTGTTGTTGTTCTGATGACCATCAGTCAGAATTTGACTTTGAAGAGATTGATGATGTTCTTGAGGACAATGATGAACAAGAGATATCGTCCTCCGTGCCCCTCAAAGTTTTTGAGAAAAAGTTCGGCGAGTCGCCGGTTTTCATTGCTTCTGCCTTGATGGAAGATGGTGGACTTCCAAAAGGCACTAATACGCGAATACTAGTGAAAGAAGCTATTCATGTTATAAGTATTGGCTATGAAGAGAAAACTGAATGGGGCAAAGAGATAGGGTGGCTTTATGGTTCAATCACAGAAGACATCTTGACAGGGTTTAACATGCACTGCAGAGGATGGAAATCAGTTTACTGCATGCCGAAAAGAGCGGCTTTTAAAGGATCTGCTCCTATAAACCTATCAGACAGATTACATCAAGTTCTGAAATGGGCTTCTGGTTCTACCGAGATTTTCTTTAGTGGTTATTGTCCATTGTGGTATGGCTATAGTGGAAAACTTAAATGGCTTCAAAGGCTCGCGTACACGAATCATGTCGTTTATCCGTTCTCTTCCATCCCTCTTTTGGTATACTGCACAATTCCGGCTATCTGTCTTCTGACCGGAAAATTCATCCTCCCCACTATGACAAGCCTTGCAAGCATTTGGTTAATGACTCTATTTATTTCTATCATTTTAACTTGTGTGCTAGAGCTTCGTTGGAGTAAGGTTAACATTCAGGACTGGTGGCGCAACGAGCAATTCTGGGTCATTGGAGGCGTTTCTGCACACCTTTTTGCAGTGTTTCAAGGCCTCCTTAAAGTTGCAGGACTAGACACTCATTTCACCGTGAGAACAAAATCAACAGACAGCACTGCATTCGGACAGCTCCATCTCTTCAAGTGGACCACTCTTCTCATCCCACCAACAAGTATTGTAATTTTGAATATGGTTGGAATTGTGGCTGGAGTCTCTGAAGCTATTAACAGTGGCTATAACTCATGGGGACTTTTATTTGGGAAGGTTTTTTTCTCTTTATGGGTAATTGTTCACTTGTATCCTTTCCTCAAAGGTCTGATGGGAAGGCAAAACAAAACTCCTATCGTAGTAGTTCTGTGGGCAACACTTCTAGCGTTGATTTTCTCAATGATTTGGGTGCGAATTGATGTTTTCTTGCCCAAGAAAATAGGTCCTGTACTTTCACAATGTGGGATAGAATGTTAA 2679 0.4203 MASKALTSGSHSRNGYRFSVFDDSDEENGDFNIQQQRKHNDHAFSLAGSVASKEFEEQKSFNYNEEKGKGNQEKRSLMSNDIGDDEYLLSESRQPLCRKVPIASSLINPYRIVIVMRLVVLVFFFHFRITTPVHDAFALWIISVICEIWLSLSWVIDQFPKWFPMTRETYLERLSMRFEREGEPNLLAAVDVFVTTADPLKEPPIVTANTVLSILSVDYPVDKVSCYVSDDSASMLLFDTLSQTSQFARIWIPFCKKYNIEPRAPESYFSQKVDYLKDKVLPTFVKDRRAMKREYEEFKVRINVLVADSQKKPEEGWVLQDGTPWPGNNTDNHPGMIQVCLGSAGAVDNEGKSLPRLVYVSREKCSGYQHHNKAGAMNSLLRVSAVLSNAPFVLNLDCDQYINNCQAIREAMCFLMDPLLGKKTAYVQFPRRFDGIDNNDRYANHNTVFFDINMKCLDGIQGPVYVGTGCVFNRQALYGYKPPTEKRQKTGFSCCCCCSDDHQSEFDFEEIDDVLEDNDEQEISSSVPLKVFEKKFGESPVFIASALMEDGGLPKGTNTRILVKEAIHVISIGYEEKTEWGKEIGWLYGSITEDILTGFNMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLKWASGSTEIFFSGYCPLWYGYSGKLKWLQRLAYTNHVVYPFSSIPLLVYCTIPAICLLTGKFILPTMTSLASIWLMTLFISIILTCVLELRWSKVNIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVAGLDTHFTVRTKSTDSTAFGQLHLFKWTTLLIPPTSIVILNMVGIVAGVSEAINSGYNSWGLLFGKVFFSLWVIVHLYPFLKGLMGRQNKTPIVVVLWATLLALIFSMIWVRIDVFLPKKIGPVLSQCGIEC 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi498g00017 892 SUPERFAMILY Nucleotide-diphospho-sugar transferases 204 697 IPR029044 -
Vivi498g00017 892 MobiDBLite consensus disorder prediction 18 35 - -
Vivi498g00017 892 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 296 482 IPR029044 -
Vivi498g00017 892 MobiDBLite consensus disorder prediction 1 17 - -
Vivi498g00017 892 FunFam Cellulose synthase 307 481 - -
Vivi498g00017 892 Pfam Cellulose synthase 190 883 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vivi498g00017 892 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 93 856 - -
Vivi498g00017 892 MobiDBLite consensus disorder prediction 1 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi498g00017 88 892 Cell Wall Biosynthesis AT5G17420 68.466 0.0 1202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi498g00017 K10999 - gmx:100777278 1458.74