Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi498g00017 | ATGGCCTCAAAAGCTTTAACCAGTGGTTCTCACTCCCGAAATGGTTACCGTTTCTCAGTCTTTGATGACTCGGATGAGGAAAATGGAGACTTCAATATTCAACAACAAAGGAAACACAATGATCATGCTTTCTCTTTGGCTGGAAGCGTAGCTAGTAAGGAATTTGAAGAGCAGAAATCATTCAACTATAATGAAGAGAAAGGGAAAGGAAATCAAGAAAAGAGAAGTCTTATGAGCAATGACATAGGAGATGATGAATACCTTTTGTCTGAGTCGAGGCAACCATTATGTCGCAAAGTACCAATAGCTTCGAGCCTAATCAATCCATACCGCATAGTCATAGTCATGCGTCTCGTTGTCCTAGTTTTCTTCTTCCACTTCCGCATCACAACGCCTGTGCACGATGCATTTGCCTTATGGATAATCTCGGTGATCTGCGAAATATGGCTCTCTTTGTCTTGGGTGATAGACCAATTCCCCAAGTGGTTCCCCATGACTCGCGAAACTTACTTGGAGCGCTTGTCTATGAGGTTCGAGCGTGAAGGAGAGCCGAACCTTTTAGCCGCAGTTGATGTCTTTGTTACCACTGCAGACCCTTTGAAGGAACCACCGATAGTAACAGCAAACACAGTACTATCAATCTTGTCTGTTGATTATCCTGTTGACAAAGTTAGCTGCTACGTCTCCGATGATAGTGCTTCTATGCTTCTCTTTGATACTTTGTCACAAACTTCTCAGTTTGCAAGAATATGGATTCCATTTTGTAAAAAGTACAACATTGAGCCAAGAGCTCCCGAGTCTTATTTTTCTCAGAAAGTTGATTACTTGAAAGACAAGGTACTTCCAACATTTGTAAAGGACCGCAGAGCTATGAAGAGAGAGTATGAAGAATTCAAGGTGAGAATTAATGTACTTGTTGCAGATTCTCAGAAAAAACCAGAAGAGGGGTGGGTGCTGCAAGATGGTACTCCATGGCCTGGGAATAACACTGACAATCATCCAGGAATGATTCAGGTATGTTTGGGAAGTGCTGGTGCTGTAGACAATGAAGGCAAGTCACTTCCGCGGCTTGTATATGTTTCGCGCGAGAAATGTTCTGGCTATCAACACCATAACAAAGCTGGAGCAATGAATTCTCTGCTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGTGTTGAATCTGGATTGTGATCAATACATCAATAATTGCCAGGCTATTAGGGAAGCTATGTGCTTCCTCATGGACCCTCTACTTGGAAAAAAGACCGCTTATGTCCAATTTCCGCGAAGGTTTGATGGCATCGACAACAATGATAGATATGCTAATCACAATACTGTATTCTTTGATATCAACATGAAATGCCTTGATGGAATTCAAGGTCCAGTTTATGTTGGTACTGGATGTGTGTTCAACAGACAGGCATTATATGGCTATAAGCCACCAACCGAAAAAAGGCAAAAGACGGGCTTTTCATGCTGCTGTTGTTGTTCTGATGACCATCAGTCAGAATTTGACTTTGAAGAGATTGATGATGTTCTTGAGGACAATGATGAACAAGAGATATCGTCCTCCGTGCCCCTCAAAGTTTTTGAGAAAAAGTTCGGCGAGTCGCCGGTTTTCATTGCTTCTGCCTTGATGGAAGATGGTGGACTTCCAAAAGGCACTAATACGCGAATACTAGTGAAAGAAGCTATTCATGTTATAAGTATTGGCTATGAAGAGAAAACTGAATGGGGCAAAGAGATAGGGTGGCTTTATGGTTCAATCACAGAAGACATCTTGACAGGGTTTAACATGCACTGCAGAGGATGGAAATCAGTTTACTGCATGCCGAAAAGAGCGGCTTTTAAAGGATCTGCTCCTATAAACCTATCAGACAGATTACATCAAGTTCTGAAATGGGCTTCTGGTTCTACCGAGATTTTCTTTAGTGGTTATTGTCCATTGTGGTATGGCTATAGTGGAAAACTTAAATGGCTTCAAAGGCTCGCGTACACGAATCATGTCGTTTATCCGTTCTCTTCCATCCCTCTTTTGGTATACTGCACAATTCCGGCTATCTGTCTTCTGACCGGAAAATTCATCCTCCCCACTATGACAAGCCTTGCAAGCATTTGGTTAATGACTCTATTTATTTCTATCATTTTAACTTGTGTGCTAGAGCTTCGTTGGAGTAAGGTTAACATTCAGGACTGGTGGCGCAACGAGCAATTCTGGGTCATTGGAGGCGTTTCTGCACACCTTTTTGCAGTGTTTCAAGGCCTCCTTAAAGTTGCAGGACTAGACACTCATTTCACCGTGAGAACAAAATCAACAGACAGCACTGCATTCGGACAGCTCCATCTCTTCAAGTGGACCACTCTTCTCATCCCACCAACAAGTATTGTAATTTTGAATATGGTTGGAATTGTGGCTGGAGTCTCTGAAGCTATTAACAGTGGCTATAACTCATGGGGACTTTTATTTGGGAAGGTTTTTTTCTCTTTATGGGTAATTGTTCACTTGTATCCTTTCCTCAAAGGTCTGATGGGAAGGCAAAACAAAACTCCTATCGTAGTAGTTCTGTGGGCAACACTTCTAGCGTTGATTTTCTCAATGATTTGGGTGCGAATTGATGTTTTCTTGCCCAAGAAAATAGGTCCTGTACTTTCACAATGTGGGATAGAATGTTAA | 2679 | 0.4203 | MASKALTSGSHSRNGYRFSVFDDSDEENGDFNIQQQRKHNDHAFSLAGSVASKEFEEQKSFNYNEEKGKGNQEKRSLMSNDIGDDEYLLSESRQPLCRKVPIASSLINPYRIVIVMRLVVLVFFFHFRITTPVHDAFALWIISVICEIWLSLSWVIDQFPKWFPMTRETYLERLSMRFEREGEPNLLAAVDVFVTTADPLKEPPIVTANTVLSILSVDYPVDKVSCYVSDDSASMLLFDTLSQTSQFARIWIPFCKKYNIEPRAPESYFSQKVDYLKDKVLPTFVKDRRAMKREYEEFKVRINVLVADSQKKPEEGWVLQDGTPWPGNNTDNHPGMIQVCLGSAGAVDNEGKSLPRLVYVSREKCSGYQHHNKAGAMNSLLRVSAVLSNAPFVLNLDCDQYINNCQAIREAMCFLMDPLLGKKTAYVQFPRRFDGIDNNDRYANHNTVFFDINMKCLDGIQGPVYVGTGCVFNRQALYGYKPPTEKRQKTGFSCCCCCSDDHQSEFDFEEIDDVLEDNDEQEISSSVPLKVFEKKFGESPVFIASALMEDGGLPKGTNTRILVKEAIHVISIGYEEKTEWGKEIGWLYGSITEDILTGFNMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLKWASGSTEIFFSGYCPLWYGYSGKLKWLQRLAYTNHVVYPFSSIPLLVYCTIPAICLLTGKFILPTMTSLASIWLMTLFISIILTCVLELRWSKVNIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVAGLDTHFTVRTKSTDSTAFGQLHLFKWTTLLIPPTSIVILNMVGIVAGVSEAINSGYNSWGLLFGKVFFSLWVIVHLYPFLKGLMGRQNKTPIVVVLWATLLALIFSMIWVRIDVFLPKKIGPVLSQCGIEC | 892 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi498g00017 | 892 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 204 | 697 | IPR029044 | - | |
| Vivi498g00017 | 892 | MobiDBLite | consensus disorder prediction | 18 | 35 | - | - | |
| Vivi498g00017 | 892 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 296 | 482 | IPR029044 | - | |
| Vivi498g00017 | 892 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Vivi498g00017 | 892 | FunFam | Cellulose synthase | 307 | 481 | - | - | |
| Vivi498g00017 | 892 | Pfam | Cellulose synthase | 190 | 883 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
| Vivi498g00017 | 892 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 93 | 856 | - | - | |
| Vivi498g00017 | 892 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Showing 1 to 8 of 8 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi498g00017 | K10999 | - | gmx:100777278 | 1458.74 |
Showing 1 to 1 of 1 entries