Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi498g00016 ATGGCCTCAAAAGCTTTAACCAGTGGTTCTCACTCCCGAAATGGTTACCGTTTCTCAGTCTTTGATGACTCGGATGAGGAAAATGGAGACTTCAATATTCAACAACAAAGGAAACACAATGATCATGCTTTCTCTTTGGCTGGAAGCGCTAGTAAGGAATTTGAAGAGCAGAAATCATTCAACTATAATGAAGAGAAAGGGAAAGGAAATCAAGAAAAGAGAAGTCTTATGAGCAATGACATAGGAGATGATGAATACCTTTTGTCTGAGTCGAGGCAACCATTATGTCGCAAAGTACCAATAGCTTCGAGCCTAATCAATCCATACCGCATAGTCATAGTCATGCGTCTCGTTGTCCTAGTTTTCTTCTTCCACTTCCGCATCACAACGCCTGTGCACGATGCATTTGCCTTATGGATAATCTCGGTGATCTGCGAAATATGGCTCTCTTTGTCTTGGGTGATAGACCAATTCCCCAAGTGGTTCCCCATGACTCGCGAAACTTACTTGGAGCGCTTGTCTATGAGGTTCGAGCGTGAAGGAGAGCCGAACCTTTTAGCCGCAGTTGATGTCTTTGTTACCACTGCAGACCCTTTGAAGGAACCACCGATAGTAACAGCAAACACAGTACTATCAATCTTGTCTGTTGATTATCCTGTTGACAAAGTTAGCTGCTACGTCTCCGATGATAGTGCTTCTATGCTTCTCTTTGATACTTTGTCACAAACTTCTCAGTTTGCAAGAATATGGATTCCATTTTGTAAAAAGTACAACATTGAGCCAAGAGCTCCCGAGTCTTATTTTTCTCAGAAAGTTGATTACTTGAAAGACAAGGTACTTCCAACATTTGTAAAGGACCGCAGAGCTATGAAGAGAGAGTATGAAGAATTCAAGGTGAGAATTAATGTACTTGTTGCAGATTCTCAGAAAAAACCAGAAGAGGGGTGGGTGCTGCAAGATGGTACTCCATGGCCTGGGAATAACACTGACAATCATCCAGGAATGATTCAGGTATGTTTGGGAAGTGCTGGTGCTGTAGACAATGAAGGCAAGTCACTTCCGCGGCTTGTATATGTTTCGCGCGAGAAATGTTCTGGCTATCAACACCATAACAAAGCTGGAGCAATGAATTCTCTGCTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGTGTTGAATCTGGATTGTGATCAATACATCAATAATTGCCAGGCTATTAGGGAAGCTATGTGCTTCCTCATGGACCCTCTACTTGGAAAAAAGACCGCTTATGTCCAATTTCCGCGAAGGTTTGATGGCATCGACAACAATGATAGATATGCTAATCACAATACTGTATTCTTTGATATCAACATGAAATGCCTTGATGGAATTCAAGGTCCAGTTTATGTTGGTACTGGATGTGTGTTCAACAGACAGGCATTATATGGCTATAAGCCACCAACCGAAAAAAGGCAAAAGACGGGCTTTTCATGCTGCTGTTGTTGTTCTGATGACCATCAGTCAGAATTTGACTTTGAAGAGATTGATGATGTTCTTGAGGACAATGATGAACAAGAGATATCGTCCTCCGTGCCCCTCAAAGTTTTTGAGAAAAAGTTCGGCGAGTCGCCGGTTTTCATTGCTTCTGCCTTGATGGAAGATGGTGGACTTCCAAAAGGCACTAATACGCGAATACTAGTGAAAGAAGCTATTCATGTTATAAGTATTGGCTATGAAGAGAAAACTGAATGGGGCAAAGAGATAGGGTGGCTTTATGGTTCAATCACAGAAGACATCTTGACAGGGTTTAACATGCACTGCAGAGGATGGAAATCAGTTTACTGCATGCCGAAAAGAGCGGCTTTTAAAGGATCTGCTCCTATAAACCTATCAGACAGATTACATCAAGTTCTGAAATGGGCTTCTGGTTCTACCGAGATTTTCTTTAGTGGTTATTGTCCATTGTGGTATGGCTATAGTGGAAAACTTAAATGGCTTCAAAGGCTCGCGTACACGAATCATGTCGTTTATCCGTTCTCTTCCATCCCTCTTTTGGTATACTGCACAATTCCGGCTATCTGTCTTCTGACCGGAAAATTCATCCTCCCCACTATGACAAGCCTTGCAAGCATTTGGTTAATGACTCTATTTATTTCTATCATTTTAACTTGTGTGCTAGAGCTTCGTTGGAGTAAGGTTAACATTCAGGACTGGTGGCGCAACGAGCAATTCTGGGTCATTGGAGGCGTTTCTGCACACCTTTTTGCAGTGTTTCAAGGCCTCCTTAAAGTTGCAGGACTAGACACTCATTTCACCGTGAGAACAAAATCAACAGACAGCACTGCATTCGGACAGCTCCATCTCTTCAAGTGGACCACTCTTCTCATCCCACCAACAAGTATTGTAATTTTGAATATGGTTGGAATTGTGGCTGGAGTCTCTGAAGCTATTAACAGTGGCTATAACTCATGGGGACTTTTATTTGGGAAGGTTTTTTTCTCTTTATGGGTAATTGTTCACTTGTATCCTTTCCTCAAAGGTCTGATGGGAAGGCAAAACAAAACTCCTATCGTAGTAGTTCTGTGGGCAACACTTCTAGCGTTGATTTTCTCAATGATTTGGGTGCGAATTGATGTTTTCTTGCCCAAGAAAATAGGTCCTGTACTTTCACAATGTGGGATAGAATGTTAA 2676 0.4204 MASKALTSGSHSRNGYRFSVFDDSDEENGDFNIQQQRKHNDHAFSLAGSASKEFEEQKSFNYNEEKGKGNQEKRSLMSNDIGDDEYLLSESRQPLCRKVPIASSLINPYRIVIVMRLVVLVFFFHFRITTPVHDAFALWIISVICEIWLSLSWVIDQFPKWFPMTRETYLERLSMRFEREGEPNLLAAVDVFVTTADPLKEPPIVTANTVLSILSVDYPVDKVSCYVSDDSASMLLFDTLSQTSQFARIWIPFCKKYNIEPRAPESYFSQKVDYLKDKVLPTFVKDRRAMKREYEEFKVRINVLVADSQKKPEEGWVLQDGTPWPGNNTDNHPGMIQVCLGSAGAVDNEGKSLPRLVYVSREKCSGYQHHNKAGAMNSLLRVSAVLSNAPFVLNLDCDQYINNCQAIREAMCFLMDPLLGKKTAYVQFPRRFDGIDNNDRYANHNTVFFDINMKCLDGIQGPVYVGTGCVFNRQALYGYKPPTEKRQKTGFSCCCCCSDDHQSEFDFEEIDDVLEDNDEQEISSSVPLKVFEKKFGESPVFIASALMEDGGLPKGTNTRILVKEAIHVISIGYEEKTEWGKEIGWLYGSITEDILTGFNMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLKWASGSTEIFFSGYCPLWYGYSGKLKWLQRLAYTNHVVYPFSSIPLLVYCTIPAICLLTGKFILPTMTSLASIWLMTLFISIILTCVLELRWSKVNIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVAGLDTHFTVRTKSTDSTAFGQLHLFKWTTLLIPPTSIVILNMVGIVAGVSEAINSGYNSWGLLFGKVFFSLWVIVHLYPFLKGLMGRQNKTPIVVVLWATLLALIFSMIWVRIDVFLPKKIGPVLSQCGIEC 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi498g00016 891 SUPERFAMILY Nucleotide-diphospho-sugar transferases 203 696 IPR029044 -
Vivi498g00016 891 MobiDBLite consensus disorder prediction 18 35 - -
Vivi498g00016 891 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 92 855 - -
Vivi498g00016 891 Pfam Cellulose synthase 189 882 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vivi498g00016 891 MobiDBLite consensus disorder prediction 1 17 - -
Vivi498g00016 891 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 295 481 IPR029044 -
Vivi498g00016 891 FunFam Cellulose synthase 306 480 - -
Vivi498g00016 891 MobiDBLite consensus disorder prediction 1 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi498g00016 87 891 Cell Wall Biosynthesis AT5G17420 68.466 0.0 1201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi498g00016 K10999 - gmx:100777278 1452.57