Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi497g00003 ATGGGTTTTCGTTTTGCTAGTATGATCAGAAGAGCATCATCTTCAAAAGCTATAGCCATGCCAAAAGGATATGTTGCTGTGTATGTTGGAGAGAAACAGACGCGGTATGTGATTCCAATTTCATACTTGACTCAACCATCATTTCAAGACTTGCTGAGTCAAGCCGAGGAAGAGTTTGGATACGATCATCCGATGGGTGGCCTCACCATTCCTTGCACAGAAGATGTCTTCCAAATTTCAACGCATACAACAATGGGTTTTCGTTTTCCTAGTATGATCAGAAGAGCATCATCTTCAAAAGCTATGGCCATGCCAAAAGGATGTGTTGCTGTGTATGTTGGAGAGAAACAAAAGCGATTTGTGATCCCAATATCATACTTGAACCAACCGTCGTTTCAAGACTTGCTGAGTCAAGCCGAGGAAGAGTTTGGATACGACCATCCAATGGGTGGTCTCACCATTCCTTGCACAGAAGATGTCTTCCAAAGTATAACTTGTGGCTTGAATAATGAGCTATGA 519 0.4239 MGFRFASMIRRASSSKAIAMPKGYVAVYVGEKQTRYVIPISYLTQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDVFQISTHTTMGFRFPSMIRRASSSKAMAMPKGCVAVYVGEKQKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDVFQSITCGLNNEL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi497g00003 172 Pfam Auxin responsive protein 96 166 IPR003676 GO:0009733
Vivi497g00003 172 Pfam Auxin responsive protein 12 78 IPR003676 GO:0009733
Vivi497g00003 172 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 92 166 IPR003676 GO:0009733
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi497g00003 20 78 Calmodulin-binding Proteins AT5G20810 52.542 3.60e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi497g00003 - K14488 pcin:129286196 221.09