Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi491g00047 ATGTTACACTGTCTCAACACTTCGGGTAATCTAACAGGAGGAGAAACAACCATTTCCGACATGACACTGTTACAAACACAAAAACCAACAATCAACTTTCACCAATTCTCTTCTTCTTCTTCTCCTCCACAGTTTATGATGGTTGCTTGCGATTCCGCTCTTGGCGAAGTCGTTGCTAATAATGGATTCGGAAAAGATAGCATTAAGAAAAGAAAAGCTGAAATTATCAATAATAATAATAATAATAGTAATTCTAAGGTTGTTGTTAATCATGACAAGAGGATGAAAGTGAGTACAGAAGAAGAGGAATCAAAAACCAGTGAGCAAGTTACAAAGACACACAAGACTACAAAGTCCAACAATGGAACAAAAAGAGAAAACTCTGGTGATACTAATTCTAAGGAAAAGCTTGATTACATTCATGTTCGAGCGCGTCGTGGTCAAGCCACTGATAGTCATAGCTTAGCAGAAAGAGTTAGAAGAGAAAAGATAAGTGAGAGGATGAAGTATTTACAAGATTTAGTGCCGGGATGTAACAAAATTGCTGGAAAAGCTGGAATGCTTGATGAAATTATTAACTATGTTCAATCTCTTCAGAGACAAGTTGAGTTCTTGTCGATGAAATTAGCAGCTGTAAATCCAAGACTTGACTTCAACATTGATGAATTGTTTGCCAAAGAGATTTTTCCTCAAAATTTTCCAACCATAGGGATGCAATCAGACATGACTAACCCTACATATCTTCAATTCAATTCAGCGCAACAAATACTTTCGAGTTGTGGTGGACTAACAAACAATATGGGGATGATCCCTCCGGAAATCGGGCTTCGGAGGAACATAAATATCCCCACATCTACATCTTTACCCGAAATCTTTGACTCATCATGTTTCACCCATATTTTACCCTCTTCAACTTGGGAAGGTGATTTTCAAAACCTTCACAGTGTGGATTTTGATCAAGGAAGATCAATGTCCTTTCCTTCTCAGCCATTCACAGGTATCTACCAATTTATGACATGTCAAATCACTTTTTTTCTTAGGCAGCTATCATAG 1053 0.3742 MLHCLNTSGNLTGGETTISDMTLLQTQKPTINFHQFSSSSSPPQFMMVACDSALGEVVANNGFGKDSIKKRKAEIINNNNNNSNSKVVVNHDKRMKVSTEEEESKTSEQVTKTHKTTKSNNGTKRENSGDTNSKEKLDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEIFPQNFPTIGMQSDMTNPTYLQFNSAQQILSSCGGLTNNMGMIPPEIGLRRNINIPTSTSLPEIFDSSCFTHILPSSTWEGDFQNLHSVDFDQGRSMSFPSQPFTGIYQFMTCQITFFLRQLS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi491g00047 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 198 IPR011598 GO:0046983
Vivi491g00047 350 MobiDBLite consensus disorder prediction 94 112 - -
Vivi491g00047 350 Pfam Helix-loop-helix DNA-binding domain 152 199 IPR011598 GO:0046983
Vivi491g00047 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 217 IPR036638 GO:0046983
Vivi491g00047 350 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 60 255 IPR024097 GO:0006355
Vivi491g00047 350 FunFam Basic helix-loop-helix transcription factor 145 217 - -
Vivi491g00047 350 CDD bHLH_AtBPE_like 138 223 - -
Vivi491g00047 350 MobiDBLite consensus disorder prediction 113 127 - -
Vivi491g00047 350 MobiDBLite consensus disorder prediction 94 136 - -
Vivi491g00047 350 Gene3D - 145 219 IPR036638 GO:0046983
Vivi491g00047 350 SMART finulus 154 204 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi491g00047 63 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 43.682 8.23e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi491g00047 HLH 3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi491g00047 - - vvo:131632228 669.848