Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi491g00038 ATGCAACCTTTCAGCGCAGAAATGCATTCTCTTAACTCCCTTTTCAACTCCTCTTCTTCTCCTCAAATCCCCATTCCTCTCCCCAATCACCACCAACACACCGACAACGACACAGAAGATTTTCTCAAACAAATGCTCTCCAATCTTTCTCCTCCCTCTCCCTGGACTATCCACCCTAATTCCGAAGAGAATTTCACTTTCCCTTATGATCAACAAACCAACCTCGCCTCCAACCACCAGATCACTGTTAAAACCATCCCCGCCCATCCCGCTGACTTTGACACCACTGGTGACGGTTCCGTCTCTGGATTTCTCCACAATCAACCTCCTCAGATGCAAAATTTTGGAGGTGGTTCAGTGAGTGTAACGAACCAAGCTCCGGTGGCTCAACCAAAGCAGAAAGTTAGGGCTAGGAGAGGACAGGCCACTGATCCACACAGCATCGCCGAAAGGTTAAGGAGGGAAAGAATAGCTGAAAGAATGAAATCATTGCAAGAGCTTGTTCCAAATGCAAATAAGACAGATAAGGCCTCCATGCTGGATGAGATCATTGATTATGTCAAGTTCCTACAGGTTCAAGTCAAGGCTTTGAGCGTGAGTAGATTAGGCGGAGCTGCATCGGTCGCTCCTCTTGTAGCTGATATGTCCTCGGAGGGTGTCAGTGACTGCGTCCAAGCCAACGGCGGCAACGCTGGGCTCCACCCTAAAACGTCGTCGTCGAACGAGAGTCTCACAATGACGGAGCATCAGGTGGCGAAGCTTATGGAGGAAGACATGGGATCCGCCATGCAATACTTGCAGGGCAAAGGCCTCTGCCTCATGCCTATTTCTCTCGCCACTGCAATCTCCACTGCCACGTGTCACACCAGGAACCCTTTGATTAACGGTGATGGACCATCTTCTCCCGGAATGTCCGTTAACAGCATAGTCAAAGATGCTAATTCTGCTTCTAAGTCGTAG 960 0.4938 MQPFSAEMHSLNSLFNSSSSPQIPIPLPNHHQHTDNDTEDFLKQMLSNLSPPSPWTIHPNSEENFTFPYDQQTNLASNHQITVKTIPAHPADFDTTGDGSVSGFLHNQPPQMQNFGGGSVSVTNQAPVAQPKQKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQVQVKALSVSRLGGAASVAPLVADMSSEGVSDCVQANGGNAGLHPKTSSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRNPLINGDGPSSPGMSVNSIVKDANSASKS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi491g00038 319 SMART finulus 147 196 IPR011598 GO:0046983
Vivi491g00038 319 MobiDBLite consensus disorder prediction 15 67 - -
Vivi491g00038 319 MobiDBLite consensus disorder prediction 41 67 - -
Vivi491g00038 319 FunFam Transcription factor bHLH66 138 203 - -
Vivi491g00038 319 MobiDBLite consensus disorder prediction 15 31 - -
Vivi491g00038 319 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 12 282 - -
Vivi491g00038 319 Pfam Helix-loop-helix DNA-binding domain 146 191 IPR011598 GO:0046983
Vivi491g00038 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 190 IPR011598 GO:0046983
Vivi491g00038 319 MobiDBLite consensus disorder prediction 293 319 - -
Vivi491g00038 319 Gene3D - 138 205 IPR036638 GO:0046983
Vivi491g00038 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 199 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi491g00038 119 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 69.154 1.08e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi491g00038 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi491g00038 - - vvo:131623482 578.941