Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi491g00037 ATGCAACCTTTCAGCGCAGAAATGCATTCTCTTAACTCCCTTTTCAACTCCTCTTCTTCTCCTCAAATCCCCATTCCTCTCCCCAATCACCACCAACACACCGACAACGACACAGAAGATTTTCTCAAACAAATGCTCTCCAATCTTTCTCCTCCCTCTCCCTGGACTATCCACCCTAATTCCGAAGAGAATTTCACTTTCCCTTATGATCAACAAACCAACCTCGCCTCCAACCACCAGATCACTGTTAAAACCATCCCCGCCCATCCCGCTGACTTTGACACCCTTTTACAGACTGGTGACGGTTCCGTCTCTGGATTTCTCCACAATCAACCTCCTCAGATGCAAAATTTTGGAGGTGGTTCAGTGAGTGTAACGAACCAAGCTCCGGTGGCTCAACCAAAGCAGAAAGTTAGGGCTAGGAGAGGACAGGCCACTGATCCACACAGCATCGCCGAAAGGTTAAGGAGGGAAAGAATAGCTGAAAGAATGAAATCATTGCAAGAGCTTGTTCCAAATGCAAATAAGACAGATAAGGCCTCCATGCTGGATGAGATCATTGATTATGTCAAGTTCCTACAGGTTCAAGTCAAGGCTTTGAGCGTGAGTAGATTAGGCGGAGCTGCATCGGTCGCTCCTCTTGTAGCTGATATGTCCTCGGAGGGTGTCAGTGACTGCGTCCAAGCCAACGGCGGCAACGCTGGGCTCCACCCTAAAACGTCGTCGTCGAACGAGAGTCTCACAATGACGGAGCATCAGGTGGCGAAGCTTATGGAGGAAGACATGGGATCCGCCATGCAATACTTGCAGGGCAAAGGCCTCTGCCTCATGCCTATTTCTCTCGCCACTGCAATCTCCACTGCCACGTGTCACACCAGGAACCCTTTGATTAACGGTGATGGACCATCTTCTCCCGGAATGTCCGTTAACAGCATAGTCAAAGATGCTAATTCTGCTTCTAAGTCGTAG 969 0.4923 MQPFSAEMHSLNSLFNSSSSPQIPIPLPNHHQHTDNDTEDFLKQMLSNLSPPSPWTIHPNSEENFTFPYDQQTNLASNHQITVKTIPAHPADFDTLLQTGDGSVSGFLHNQPPQMQNFGGGSVSVTNQAPVAQPKQKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQVQVKALSVSRLGGAASVAPLVADMSSEGVSDCVQANGGNAGLHPKTSSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRNPLINGDGPSSPGMSVNSIVKDANSASKS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi491g00037 322 Gene3D - 141 208 IPR036638 GO:0046983
Vivi491g00037 322 MobiDBLite consensus disorder prediction 15 67 - -
Vivi491g00037 322 MobiDBLite consensus disorder prediction 41 67 - -
Vivi491g00037 322 MobiDBLite consensus disorder prediction 296 322 - -
Vivi491g00037 322 MobiDBLite consensus disorder prediction 15 31 - -
Vivi491g00037 322 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 12 285 - -
Vivi491g00037 322 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Vivi491g00037 322 SMART finulus 150 199 IPR011598 GO:0046983
Vivi491g00037 322 FunFam Transcription factor bHLH66 141 206 - -
Vivi491g00037 322 Pfam Helix-loop-helix DNA-binding domain 149 194 IPR011598 GO:0046983
Vivi491g00037 322 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 202 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi491g00037 122 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 69.154 9.60e-87 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi491g00037 HLH 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi491g00037 - - vvo:131623482 589.341