Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi48g00032 ATGGCAATGTCTGTGATTAGAACAAAACGGGACCTAGTTAAACCTGCAAAGGAGACACCATTGGTCACACTAGACTTGTCGGTAATCGACAAATTACCTGTTCTAAGATGCAATGTTAGAACCTTGCATGTGTTTAGATATGGCCCTGAAGCAACAAAGGTCATAAGAGAGGCATTGTCCCTAGCACTTGTTCCTTACTACCCTCTTGCAGGACGGCTCAAAGAGTCTAATCCGCGGTGCCTCCAGATCGAATGTTCGGGTGATGGTGTGTGGTTTGTTGAGGCATCAACTGATTGCACACTTGACTCTGTCAATTACTTTGACGAAATAGAGTCAATTCCGTATGGTAATCTTCTTCCCGATGATATTCTGGAGATCGAACACATCAACCCCCTTGTGCAAATGCAGGTGACACAATTTGGGTGTGGGGGTTTTGTGATAGGCCTGGTATTCAGCCATAGCATATGTGATGGCCTTGGTGCTGCACAATTTCTAAATGCGGTTGGGGAGATAGCTAGAGGACTTGACAAACCCACCATTGAACCAGTGTGGTACAGGAACTTCTCACCCTCTCCTCAACCAAATGCATTGCCAAAACTACCTCTAACAGGTCCACCTAAAATGCCACACTACAAGCTAGAGCATTCTAACATAGACTTTACTATGGATCATATCAACGGGCTGAAAAGACAGTTTCGACAAGTAACTAGACGAGGTTGTTCTACCTTCGAAATTGTTGCTGCATTGTTCTGGAGCAGCAGAACAAGAGCCATTAATTTTGATGCCAATACCCAAGTGAAGCTTGTGTTCTTTGCAAATTGTCGACACCTCATAGACCCTCCTCTACCCAATGGTTTCTACGGAAACTGTTTCTTCCCAGTGACAACTACAACTTCATGTGAGTCACTTGGAAAAGCAGTGAATATCATTGAAGTGGTAAAGCTGATTCAAGAAGCAAAGTCCAGGTTACCTCTAGAGTTTGTTAAGTACTTAAAGGGTGACCATATAAAAGGTGGCAATAAAGATGAGGAGGACCCTTTTGCACCTAAACCAAATTACGCCACACTCTTTATGTCGGAATGGGGGAGGTTGGGATTCGACAATGTGGACTATCAGTGGGGTCCACCTGTCCAAGTGGTCCCCATTCAAGGCTCTGTCATTGTACCAGCTGGCATTATGCGCTCGCTGCCACTCCCAAATAGAGGGATTCGTTTGGTTACATGGTGTGTGGAGGAGGCGCATCTCCCTCCCTTCATTGATCAAATCCATGGTCTTATAAATCAGCAACTGTTTTAA 1296 0.4475 MAMSVIRTKRDLVKPAKETPLVTLDLSVIDKLPVLRCNVRTLHVFRYGPEATKVIREALSLALVPYYPLAGRLKESNPRCLQIECSGDGVWFVEASTDCTLDSVNYFDEIESIPYGNLLPDDILEIEHINPLVQMQVTQFGCGGFVIGLVFSHSICDGLGAAQFLNAVGEIARGLDKPTIEPVWYRNFSPSPQPNALPKLPLTGPPKMPHYKLEHSNIDFTMDHINGLKRQFRQVTRRGCSTFEIVAALFWSSRTRAINFDANTQVKLVFFANCRHLIDPPLPNGFYGNCFFPVTTTTSCESLGKAVNIIEVVKLIQEAKSRLPLEFVKYLKGDHIKGGNKDEEDPFAPKPNYATLFMSEWGRLGFDNVDYQWGPPVQVVPIQGSVIVPAGIMRSLPLPNRGIRLVTWCVEEAHLPPFIDQIHGLINQQLF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi48g00032 431 Gene3D - 1 199 IPR023213 -
Vivi48g00032 431 PANTHER ACYL TRANSFERASE 4 3 423 - -
Vivi48g00032 431 Gene3D - 201 420 IPR023213 -
Vivi48g00032 431 Pfam Transferase family 4 383 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi48g00032 12 418 Monolignol Biosynthesis Gene Families AT5G48930 28.929 2.45e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi48g00032 - - mtr:11426631 717.998