Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi48g00018 | ATGGGAAGACACTCTTGCTGCTACAAACAGAAGCTCAGGAAAGGTCTATGGTCACCTGAGGAAGATGAAAAACTCTTGAACCATATTACTAACCATGGCCATGGATGTTGGAGCTCAGTTCCTAAGCAAGCAGGTCTTCAAAGATGTGGTAAGAGTTGTAGACTTAGATGGATTAATTACCTAAGACCTGATTTAAAAAGAGGTACATTTTCACAAGATGAAGAAAATCTCATCATTGAACTTCATTCAGTACTAGGAAATAGATGGTCTCAAATTGCTGCGCAGTTACCAGGAAGAACCGACAACGAAATAAAGAATCTATGGAATTCTTGCTTAAAGAAGAAACTGAAGCAAAAAGGTATAGATCCTGTGACTCATAAGCCACTTTCTGAGGTAGAGAATGGAGAAGAAGAAGATGAGAAAACCAGAAGCCAAGAGAAAGTAACAGAAATATCAGAAAGCACTTCAGGTTCTTATGAGAAGAAACAGTCTTCAATTGTTGTAAAAGCCTATGAACCTGAAATGGAAGTTGAAGGTTCTTGTTCAAACTCCAACAACTATTTGATGGGAAATTATCCTATGCAGATGAGTTTCACATCCAATGATAATCTTCCAAACAATGTTTCAAACTCTTCTTCTCACTGGTTCAACCAAACTGGACTAAAACCTTTTGATATGAACTCTGAGTTCACCTCATTTCTACCTAGTTCTTTTTGCTACAAATCATCGGTTCTCGATGTTCCGTCAGAAGATGTTTCGATTTCTTCGGATTCTTTCCATATGAAGAATAGTATGTTACCTTCTTGGGGGTTAACAGATTGTGAGACCTCTATTAAAGAGAATCAAACAGAAGAAGATGAAGCTAAGTGGAATGAGTATCTTCAAAATCCAATGCTAATGCTGCAAAATCAAGCTGCTGAGGGTTTATGCAATCAGAGAAAGGCTGCTCCAACAAATGTGAGCCATGATGATGCTTTAGAGACTATGTTGCCTCATTCAAAGCAAGAGGAATCTTCTCAATCTTATAGTATAGCTTCTTTTGGAGATGTATAG | 1053 | 0.378 | MGRHSCCYKQKLRKGLWSPEEDEKLLNHITNHGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQDEENLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLKQKGIDPVTHKPLSEVENGEEEDEKTRSQEKVTEISESTSGSYEKKQSSIVVKAYEPEMEVEGSCSNSNNYLMGNYPMQMSFTSNDNLPNNVSNSSSHWFNQTGLKPFDMNSEFTSFLPSSFCYKSSVLDVPSEDVSISSDSFHMKNSMLPSWGLTDCETSIKENQTEEDEAKWNEYLQNPMLMLQNQAAEGLCNQRKAAPTNVSHDDALETMLPHSKQEESSQSYSIASFGDV | 350 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi48g00018 | 350 | Coils | Coil | 350 | 350 | - | - | |
Vivi48g00018 | 350 | FunFam | MYB transcription factor | 68 | 140 | - | - | |
Vivi48g00018 | 350 | MobiDBLite | consensus disorder prediction | 331 | 350 | - | - | |
Vivi48g00018 | 350 | PANTHER | MYB DOMAIN PROTEIN 55 | 1 | 295 | - | - | |
Vivi48g00018 | 350 | MobiDBLite | consensus disorder prediction | 122 | 148 | - | - | |
Vivi48g00018 | 350 | Gene3D | - | 11 | 67 | - | - | |
Vivi48g00018 | 350 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Vivi48g00018 | 350 | CDD | SANT | 17 | 61 | IPR001005 | - | |
Vivi48g00018 | 350 | Gene3D | - | 69 | 150 | - | - | |
Vivi48g00018 | 350 | SMART | sant | 66 | 114 | IPR001005 | - | |
Vivi48g00018 | 350 | SMART | sant | 13 | 63 | IPR001005 | - | |
Vivi48g00018 | 350 | SUPERFAMILY | Homeodomain-like | 12 | 108 | IPR009057 | - | |
Vivi48g00018 | 350 | MobiDBLite | consensus disorder prediction | 122 | 157 | - | - | |
Vivi48g00018 | 350 | Pfam | Myb-like DNA-binding domain | 67 | 111 | IPR001005 | - | |
Vivi48g00018 | 350 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Vivi48g00018 | 350 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Vivi48g00018 | 350 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Vivi48g00018 | 350 | MobiDBLite | consensus disorder prediction | 332 | 350 | - | - | |
Vivi48g00018 | 350 | CDD | SANT | 69 | 109 | IPR001005 | - | |
Vivi48g00018 | 350 | FunFam | Myb transcription factor | 11 | 67 | - | - | |
Vivi48g00018 | 350 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi48g00018 | 1 | 147 | MYB Transcription Factor Family | AT4G01680 | 86.395 | 2.27e-92 | 274 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Vivi48g00018 | Myb_DNA-binding | 3.1e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi48g00018 | K09422 | - | gmx:100782199 | 406.371 |