Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi48g00016 ATGATAATGAAGCTGATTCTCATAATAACGTTTTCTTTTGTTATCTCAGTGATTAGATCTGAGACTGAGACAGAGAGTTTTTCACCTCTGTATATGTTGGAAAACGATGTCTTTTCAGCTCAAGTGTCTTCTTCTCAACCTCAATCTCTCATGGTTCCACTCACTCTTATTCAAGGAGCTGATTCTAAAGGAGCAGTATGTTTGGATGGAACATTACCTGCTTATCACTTCCATCCTGGATCTGGATCTGGTGCAAATAATTGGCTAGTTAATTTGGAGGGAGGAGGATGGTGTAATAATATCAGAACATGTGTGTTTAGAAAAACTACTCGTCGCGGTTCGTCAAAATACATGGATAAGCAAATACCGTTCACAGGAATATTGAGCAATAAAGCTGAAGAAAACCCTGATTTTTATAACTGGAATAGAGTCAAAGTGCGGTACTGCGATGGCGCATCTTTCGCTGGAGACAGTCAAAATGAGGCTGCAAACCTTCAATTTAGAGGACAAAAAATATGGCAAGCTGCAATAGAGGAATTAATGTCCAAAGGAATGAAGAATGCCAAACAGGCTCTTCTGTCTGGATGCTCTGCGGGAGGACTGGCAACTATACTTCATTGTGACGAATTCGGAAGCTTGTTTCCAAAATCTACCAAAGTCAAATGTTTCAGTGATGCAGGATTCTTTCTTGACGCAACCGATGTATCTGGCGAACGCACATTGAGGAAAATGTTCGGCGGCGTTGTTAGTTTACAGGAAGTACAAAAAAATCTGCCAAAAAGTTGTCTTGACCACCTCGATCCAACTTCGTGCTTCTTTCCTGAAAACTTGATCGATCATATTCAAACTCCGTTGTTTCTGCTGAACGCAGCTTATGATGGATGGCAGTTGTATGAAAGTTTAACCCCGTCTACGGCCGATCCCCACGGCTATTGGACTGCTTGTAAATTGAATCAGACGAAATGTAACACGACCCAAATTGAGTTCCTCCAAAAGTTCAGGAATCAAATGCTAAATGACGTAAAAGACTTCTCAACGACATCTCAATCTGGATTATTCATAAATTCTTGTTTCACGCATTGTCAATCCGAGAGACAAGATACATGGTTTGCTAGTGACTCTCCACTTCTTAACAACACGCGGATTGCGAACGCGGTTGGAAATTGGTTTTTCGATCGGAAAGTTGTGAAAGCTATTGACTGTCCTTATCCATGTGACAAAACCTGCCATAGTTTGTTCACCAAGAAATCATTGTGA 1257 0.4089 MIMKLILIITFSFVISVIRSETETESFSPLYMLENDVFSAQVSSSQPQSLMVPLTLIQGADSKGAVCLDGTLPAYHFHPGSGSGANNWLVNLEGGGWCNNIRTCVFRKTTRRGSSKYMDKQIPFTGILSNKAEENPDFYNWNRVKVRYCDGASFAGDSQNEAANLQFRGQKIWQAAIEELMSKGMKNAKQALLSGCSAGGLATILHCDEFGSLFPKSTKVKCFSDAGFFLDATDVSGERTLRKMFGGVVSLQEVQKNLPKSCLDHLDPTSCFFPENLIDHIQTPLFLLNAAYDGWQLYESLTPSTADPHGYWTACKLNQTKCNTTQIEFLQKFRNQMLNDVKDFSTTSQSGLFINSCFTHCQSERQDTWFASDSPLLNNTRIANAVGNWFFDRKVVKAIDCPYPCDKTCHSLFTKKSL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi48g00016 418 PANTHER NOTUM-RELATED 39 411 IPR004963 GO:0016787
Vivi48g00016 418 Pfam Pectinacetylesterase 45 395 IPR004963 GO:0016787
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi48g00016 2 415 Carbohydrate Esterase AT2G46930 62.560 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi48g00016 K19882 - gmx:100785270 644.425