LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi486g00020	ATGGAGTCTCAATCTCAATCCATAGCTTCGTCTTCTCGTAATCCCTCTCAGTTATCATGGATGAACTTGTCTAGGAATTTATTGTTAGCATATCAAAGCTTTGGTGTAGTATATGGAGATCTGAGCACATCACCTCTCTATGTTTATACAAGCACATTTAAAGGAAAGTTGAAGGATCACCATGATGAAGAAACTATCTTCGGTGTTTTTTCATTGATTTTCTGGACTATTACATTAATACCATTGCTTAAATACGTATTCATCATATTGAGCGCCAATGATAACGGTGAAGGTGGGACTTTTGCTCTCTATTCACTGCTATGTAGGCACGCCAAATTTAATTTGCTTCCCAATCAACAAGCAGCCGATGAGGAGCTGTCATCCTACAAATACGGTCCCTCGTCGCAGACCGGAGGAGCCTCGTCTCCGCTCAAGATGTTTTTGGAGAAGCACAAACGGTTAAGAACAGTCCTGCTTGTTGTCGTACTGTTTGGTGCTTGTATGGTCATAGGCGATGGCGTGCTTTCACCAGCTATTTCAGTTCTGGCATCAGTATCAGGGTTAAAAGTTACGATAACGAAATTCAATAACGGTGAACTTGTTCTTCTAGCATGTGTCATATTAGTTGGCATGTTTGCTCTTCAACATTGTGGAACACACAGAATTGCGTTTATGTTTGCACCAATCGTAATCATCTGGCTTCTATCGATTTTTATTATTGGGATCTATAATACAATACTCTGGAATCCGAAAATAGTTTTTGCTATCTCGCCACATTATATTATCCAGTTCTTCATCAAGACTGGTACCGAGGGTTGGATTTCTCTCGGAGGGATACTTCTCTGTATCACTGGAGCCGAAGCTATGTTTGCAGATCTTGGCCATTTTACTGCTACATCAATAAGGCTTGCATTTGCGGTTGTTATATACCCGTGTTTGGTAATGCAATACATGGGCCAAGCAGCTTTTTTGTCCAAAAACCTCAACTCTATTCAAAATAGTTTTTACGACTCAATACCTGAACCTGTATTTTGGCCGGTCTTTGTTATTGCTACATTGGCAGCCATTGTTGGAAGTCAAGCTTCCATCACTGCCACTTTCTCCATCATCAAGCAGTGTCATGCACTTGATTGTTTTCCCCGCGTCAAAGTTGTTCACACCTCAAAACACATGTTTGGACAGATCTACATCCCAGAAATAAACTGGATACTTATGGTTCTGACTCTTGCTGTAACCATTGGATTTCAGGACACAACCTTAATCGGAAATGCTTATGGACTTGCTTGTATGACCGTAATGTTTGTGACAACGTTTCTGATGGCACTTGTCATAGTCTTCGTGTGGCAGAAAAGCATTGTGATTGCTACACTATTCCTTTTGTTCTTTTGGGTGGTAGAAGCGGTATATCTATCGGCGGCGTTCCTAAAAGTGCACCAAGGAGGATGGGTTCCTCTTGTCCTGTCGTTCTTCTTTTTGGTCGTTATGTATGTATGGCATTACGGTATCCGTAGGAAGTACAAATACGATCTACACAACAAAGTTTCGTTGAAATGGTTACTAGGTTTGGGACCTAGTCTTGGAATTGTTCGTGTCCCGGGAATCGGTCTCATCTACTCGGAACTTGCGACGGGAATACCAGCGATATTCACCCATTTCGTAACTAACCTCCCTGCATTTCACAAGGTTCTGGTTTTTGTCTGCGTGAAATCGGTTCCTGTTCCACATGTCTCGCCTGAAGAACGCTTTTTGATAGGCCGAGCTTGTCCAAGACCGTTTCGAATGTATAGGTGCATTGTTAGATACGGCTACAAAGACATTAAAAGGGACGACGGCGAGTTTGAGAACCATCTCATACAAAGTATAATGGAGTTCATCCAAATGGAAGCTGTAGAACCACAATTCTCAAGTTCTGATTCTTCTTCATTTGACGCGAGAATGGCTGTCATAGGCACCAGAAGCTTAGAATCAACTCCAACCTTGATCGCGTCCGAGCAAGAAGACGTTGATATCGACGAAAGCATCCCTAGTAGCAGATCTATAACACTACGACGCTTGCAATCCACCATCGAAGACGAGAACCCGCAAGTCAGAAGGCGTAGAGTAAAATTTCAAGTGCCTAACAATCCCGGGTTGGATAATGCTGTTAAAGAAGAGATTCTAGATTTGATCCAAGCCAAAGAAGCGGGAATCGCGTATATAATGGGACACTCGTATGTGAAGGCAAGGAAATCATCGTCGTTCTTGAAAAAGATTGTGATCGATATGGGATACTCGTTTCTGCGGAAGAATTGCCGGGGCCCGGCCGTGGCTCTTAACATTCCTCACATCAGTCTTATTGAAGTTGGAATGATATATTATGTTTAG	2364	0.4239	MESQSQSIASSSRNPSQLSWMNLSRNLLLAYQSFGVVYGDLSTSPLYVYTSTFKGKLKDHHDEETIFGVFSLIFWTITLIPLLKYVFIILSANDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQTGGASSPLKMFLEKHKRLRTVLLVVVLFGACMVIGDGVLSPAISVLASVSGLKVTITKFNNGELVLLACVILVGMFALQHCGTHRIAFMFAPIVIIWLLSIFIIGIYNTILWNPKIVFAISPHYIIQFFIKTGTEGWISLGGILLCITGAEAMFADLGHFTATSIRLAFAVVIYPCLVMQYMGQAAFLSKNLNSIQNSFYDSIPEPVFWPVFVIATLAAIVGSQASITATFSIIKQCHALDCFPRVKVVHTSKHMFGQIYIPEINWILMVLTLAVTIGFQDTTLIGNAYGLACMTVMFVTTFLMALVIVFVWQKSIVIATLFLLFFWVVEAVYLSAAFLKVHQGGWVPLVLSFFFLVVMYVWHYGIRRKYKYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGIPAIFTHFVTNLPAFHKVLVFVCVKSVPVPHVSPEERFLIGRACPRPFRMYRCIVRYGYKDIKRDDGEFENHLIQSIMEFIQMEAVEPQFSSSDSSSFDARMAVIGTRSLESTPTLIASEQEDVDIDESIPSSRSITLRRLQSTIEDENPQVRRRRVKFQVPNNPGLDNAVKEEILDLIQAKEAGIAYIMGHSYVKARKSSSFLKKIVIDMGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV	787

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi486g00020	787	Pfam	K+ potassium transporter	31	605	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Vivi486g00020	787	NCBIfam	potassium uptake protein	29	787	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Vivi486g00020	787	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	19	786	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi486g00020	5	787	Inorganic Solute Cotransporters	AT3G02050	75.222	0.0	1198

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi486g00020	K03549		-	gmx:100790329	1320.06