Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi486g00011 ATGGACCGTTCTCTCTTACCTAGCTTCCTCTACTCCTCTACCTCATCGCCGCATAAGAAAATCGTGGAGAATGTCTCCACCTATCACCATGCTGCGGCGGAATCCTCCAAGTTTATGATTCCTTCTCCCAGCGAAACTGGGAGAAGGAACATTAAGATGTTCTCTCGCGATTACTATCTTGCTTGCGCCGTTGGTGGAAGCATATGTTGTGGCTTCACTCACATGGCAGTTACACCTCTTGATCTTGTCAAATGTAACATGCAGATTGATCCTGCAAAGTACAAGAGCATTTCGTCTGGATTTGGAGTGATGCTAAAGGAACAAGGGTTTAGAGGGTTCTTCAGAGGATGGGCACCTACATTTATTGGTTATAGTGCACAAGGAGCTTTCAAATATGGATTCTATGAGTATTTCAAAAAGTACTATTCAGATGTTGTTGGTCCAGAATATGCTACAAAGTACAAGACATTGATTTACCTTGCTGGAGCAGCTTCTTCTGAGGTTATTGCTGATGTTGCACTTTGTCCGTTTGAAGCTATTAAGGTTAGAGTTCAAACTCAACCCGGTTTTGCTAGAGGCCTTTCTGATGGTTTACCCAAATTGATCCGATCCGAAGGAGTTTCAGGGTTGTACAAGGGAGTTGTGCCACTTTGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCTTCTTATGAAAACATTGTTGAGATGATATACAAGCATGCCATCCCCACACCAAAGGAAGATTGCACCAAAACGCTACAACTTGGTGTGAGTGTTGTGGGTGGATATTTAGCTGGAATATTGTGCGCGGTTGTGTCTCATCCCGCAGATAATCTTGTATCTTTCCTAAACAGTTCTAAAGGGGCAACGGCTGCTGATGCGGTAAAGAAGTTGGGATTATGGGGTATGTGTACCCGTGGTCTCCCTCTTCGTATTCTTATGGTGGGAACTCTAACTGGTGCTCAATGGGGAATTTATGATGCATTCAAAGTTTCCGTGGGACTGCCAACCACTGGTGGTGTTGCTCCTGCTCCAACTTCTACTTCTTAG 1056 0.4422 MDRSLLPSFLYSSTSSPHKKIVENVSTYHHAAAESSKFMIPSPSETGRRNIKMFSRDYYLACAVGGSICCGFTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVMLKEQGFRGFFRGWAPTFIGYSAQGAFKYGFYEYFKKYYSDVVGPEYATKYKTLIYLAGAASSEVIADVALCPFEAIKVRVQTQPGFARGLSDGLPKLIRSEGVSGLYKGVVPLWGRQVPYTMMKFASYENIVEMIYKHAIPTPKEDCTKTLQLGVSVVGGYLAGILCAVVSHPADNLVSFLNSSKGATAADAVKKLGLWGMCTRGLPLRILMVGTLTGAQWGIYDAFKVSVGLPTTGGVAPAPTSTS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi486g00011 351 FunFam Phosphate carrier protein, mitochondrial 57 335 - -
Vivi486g00011 351 Pfam Mitochondrial carrier protein 59 143 IPR018108 -
Vivi486g00011 351 Pfam Mitochondrial carrier protein 157 242 IPR018108 -
Vivi486g00011 351 Gene3D Mitochondrial carrier domain 58 333 IPR023395 -
Vivi486g00011 351 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 21 345 IPR044677 GO:0005315|GO:1990547
Vivi486g00011 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 154 238 IPR018108 -
Vivi486g00011 351 SUPERFAMILY Mitochondrial carrier 58 330 IPR023395 -
Vivi486g00011 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 57 141 IPR018108 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi486g00011 3 347 Chloroplast and Mitochondria Gene Families AT5G14040 69.061 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi486g00011 K15102 - twl:119993760 540.421