Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi486g00008 ATGGAGAAGAATCTTGATGAACATTCCAACAGTCTCCCTCACGAAGATAAGGAGAATAACACTAATGCCGCCGACGGTACACCTCGTTCACCGTTGCCAGAGAACGAAGACAAAGTCGTCGGTGGGGACGAGGAAGCTGAAAAGGATGGTGATGTAGATAATGTCGAGGGAGAGGCGGGAGAGGAAAAGAAGGAGGAGGAGAATGAGGAAGGTGTAACCATTGAGGATAAACCTGAAACTCCTCCTCCAAACTTGGAGAAACTTTCAGAAGACATTGATAAATTTCTTGCTGCTACTACACATGATAACAATGACAATAAGGAAGAGATTATTCCTGAATTCATTGACAAGTTTCTAGATCTGGTGGAAGAGAAAATCGTGAGGTACGAATCGAATCAAACAAAATGGGGTGAGACTGTGGAGGAAGATTCATTGTTGTTGGAAGGCGTGAACCGCGTCTCAAAGCTGGTGAAGTTGTTAACCATAATTATCACAGATTTTCAATCTGGAGAAGAAGAGAAAAAGGAAGGAGATGAAGAAGAAGATAAAAAAGAAGGAGGTGAGGAAGAAAAAGAAAAGGAAGAGAAGAAAACAAAAAAGGATCATTTAGTATTGTTGAACCGCGTCGGCGCAATTCAACAACGAGCAATGTCATATTTGGAGGAAGAGTTTCGGTTGTTAATGGAAGAATCTAGAATCCTAAATAAACCAGATTCAGCACATGACACTAAAGGGAAACACGCTGCAACACCAGAGCCGTCAGAAAATGAAGCAACAGAAACGGTTATGGATTTCCCGGGTTTTAAGGAGGAGGCCGTTACAATTTTGAACAAAATAGCGCGGGAAATGTTGTTTGCCGGTTATGATTCAGAATGCTGCCACGTGTATGCTGTTTCGAGAAAGCATGGTTTCGGAGACGGTTTGTACAAGCTAGGGTACGAAAGGATCAGCATGGAAGAGGTTCAAAAAATGCAATGGGAATCATTGGAGAGAGAGATTCCAACGTGGATCAACACTTTTAAAGAATGTGCCACCGTGTGGTTCCCCGGAGAACGGAAGCTCGCTGCATCGATCTTCGCGGAGCATCCGTCGGTGGCTGACACACTCTACACCAACCTCACGCGCGTCGTGGCGTTTCAGCTTCTCAACTTTGCTGAAAGTGTTGCGATGACAAAACGTGCGGCGGAGAAGCTCTTCAAGTTTCTTGACATGTACGAAACATTGAGAGACACAATTCCGAATCTGGACAAACTCTTCCCCGAGGAAATCGTCGACGAAACCAAAGCTGAAATGACATCTGCAAAGAATCGTCTCGGCGAGGTTGCTGTGTTGATATTCTGTGAACTTGAAAATTCTATCAAATCAGATACCGGAAAAACTCCAGTTGCAGGCGGCGCTGTTCATCCTCTAACTCGCTACATCATAAACTACCTGAGACTCGCGTGCGAGTATAAAGACACATTGGAAGAGGTTTTCAAAGAGCATTCAAAAATCGAGCGTTCTGATTCAACAAGTAGGCCTAATTATGACAATCAAAGCCAAAACGACAATCAGAAATCAAACGAGAAAGAAAATGTGTCCCCATTTGCCGCACAATTGACACGTTTAATGGAATTGCTCGACTCGAATCTCGAAGGAAAAGCGAAACTCTACAAAGAAGTACCATTAAGTTGCATCTTCATGATGAACAATGGAAGGTACATTGTTCAAAAAATCAAAGGATCGGCTGAAATCTACGAAGTAATGGGCGAAACATGGTGCCGTAAAAGATCCACAGAACTGAGAACTTACCATAAAAACTATCAAATAGAAACATGGAGCAAGATATTGAGTTGTTTAAGTCCAAAAGGTTTGAATGATAATGGGAAAGTTCATAAGCCAGTGCTGAAAGAAAGGTTTAAGAGTTTCAATGCATTGTTTGAGGAGATACATAAGACACAAAGCACTTGGGTTGTGAGCGATGAACAACTTCAATCTGAGCTAAGAGTTTCAATATCTGCACTTGTGATTCCTGCTTATAGATCATTTTTGGGTAGGTTTTCTCAATATTTGGATCCGGGGAGACAAACAGAAAAATATATTAAATTTCAAGCTGAGGATATAGAGACTTACATTGATGAATTGTTTGATGGGAATCCTCATCATCAAGCTATGGGCAGGAAGAAAGCATGA 2172 0.4203 MEKNLDEHSNSLPHEDKENNTNAADGTPRSPLPENEDKVVGGDEEAEKDGDVDNVEGEAGEEKKEEENEEGVTIEDKPETPPPNLEKLSEDIDKFLAATTHDNNDNKEEIIPEFIDKFLDLVEEKIVRYESNQTKWGETVEEDSLLLEGVNRVSKLVKLLTIIITDFQSGEEEKKEGDEEEDKKEGGEEEKEKEEKKTKKDHLVLLNRVGAIQQRAMSYLEEEFRLLMEESRILNKPDSAHDTKGKHAATPEPSENEATETVMDFPGFKEEAVTILNKIAREMLFAGYDSECCHVYAVSRKHGFGDGLYKLGYERISMEEVQKMQWESLEREIPTWINTFKECATVWFPGERKLAASIFAEHPSVADTLYTNLTRVVAFQLLNFAESVAMTKRAAEKLFKFLDMYETLRDTIPNLDKLFPEEIVDETKAEMTSAKNRLGEVAVLIFCELENSIKSDTGKTPVAGGAVHPLTRYIINYLRLACEYKDTLEEVFKEHSKIERSDSTSRPNYDNQSQNDNQKSNEKENVSPFAAQLTRLMELLDSNLEGKAKLYKEVPLSCIFMMNNGRYIVQKIKGSAEIYEVMGETWCRKRSTELRTYHKNYQIETWSKILSCLSPKGLNDNGKVHKPVLKERFKSFNALFEEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYIKFQAEDIETYIDELFDGNPHHQAMGRKKA 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi486g00008 723 Pfam Exo70 exocyst complex subunit 336 707 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi486g00008 723 MobiDBLite consensus disorder prediction 1 22 - -
Vivi486g00008 723 PANTHER EXOCYST COMPLEX PROTEIN EXO70 119 711 IPR004140 GO:0000145|GO:0006887
Vivi486g00008 723 MobiDBLite consensus disorder prediction 237 253 - -
Vivi486g00008 723 MobiDBLite consensus disorder prediction 505 525 - -
Vivi486g00008 723 MobiDBLite consensus disorder prediction 170 199 - -
Vivi486g00008 723 MobiDBLite consensus disorder prediction 57 104 - -
Vivi486g00008 723 MobiDBLite consensus disorder prediction 237 261 - -
Vivi486g00008 723 SUPERFAMILY Cullin repeat-like 205 710 IPR016159 -
Vivi486g00008 723 MobiDBLite consensus disorder prediction 495 525 - -
Vivi486g00008 723 Gene3D Exocyst complex component Exo70 187 718 - -
Vivi486g00008 723 FunFam Exocyst subunit Exo70 family protein 188 717 - -
Vivi486g00008 723 Coils Coil 177 197 - -
Vivi486g00008 723 MobiDBLite consensus disorder prediction 1 104 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi486g00008 34 712 EXO70 exocyst subunit family AT5G13990 49.153 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi486g00008 K07195 - gmx:100819960 873.233