Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi486g00006 ATGGCTTGTAACACATTGATGAGTTCAGCTTTCTCAGCTTTTCCATCTCTTCTTTCTTCCTCAAAATCAAGATTTTTAACTTCAGTTCCACTTCCTTGTGCTGCTTCTACCAATGCTTCTAGATTCACCATGACTTCTGATTGGATGCCTGGTCAGCCTAGACCTTCCTATCTTGATGGTTCAGCTCCAGGTGACTTTGGATTCGATCCTCTTGGTCTTGGTGCAGTACCAGAGAATCTTGAGAGATTCAAAGAGTCTGAACTCATTCACTGCAGATGGGCAATGCTTGCTGTTCCGGGGATTTTGGTACCAGAGGCATTGGGGTTAGGGAACTGGGTAAAAGCTCAGGAATGGGCAGCACTTCCTGGAGGACAAGCAACCTACTTAGGAAACCCTGTTCCATGGGGTACCTTACCCACCATTTTGGTCATTGAGTTCCTTTCTATTGCTTTTGTTGAACACCAAAGGAGTATGGAGAAAGACCCTGAAAAGAGGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGTTACTCTAAAGACCCTAAAAAGTTCCATGAATACAAAATCAAAGAAGTTAAGAATGGACGTCTTGCTTTGTTGGCTTTTGTTGGAATCTGTATTCAACAATCAGCATATCCAGGGACTGGACCTTTGGAGAATTTGGCAACTCACTTGGCTGATCCATGGCACAACAACATTGGAAATGTTCTTATTCCACCACAATAG 726 0.4353 MACNTLMSSAFSAFPSLLSSSKSRFLTSVPLPCAASTNASRFTMTSDWMPGQPRPSYLDGSAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKRKYPGGAFDPLGYSKDPKKFHEYKIKEVKNGRLALLAFVGICIQQSAYPGTGPLENLATHLADPWHNNIGNVLIPPQ 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi486g00006 241 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 42 234 IPR001344 GO:0009765|GO:0016020
Vivi486g00006 241 SUPERFAMILY Chlorophyll a-b binding protein 40 237 - -
Vivi486g00006 241 Pfam Chlorophyll A-B binding protein 55 209 IPR022796 -
Vivi486g00006 241 FunFam Chlorophyll a-b binding protein, chloroplastic 49 235 - -
Vivi486g00006 241 Gene3D Chlorophyll a/b binding protein domain 49 235 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi486g00006 1 196 Chloroplast and Mitochondria Gene Families AT3G54890 80.303 1.02e-108 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi486g00006 K08907 - gmx:100305992 425.631