Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi486g00002 ATGTCGCTGGAACCGTTGGATCGAAAGAGGAAGTACGAGAGCTCCGAGTCTCTAGGGACTGTGGGTAGATGGAGAGGCTCTTCTTCTCATCATCACCACCACCGTCCTCAACAGTTCAATCGGCCTGGCAATTTTAGGAGAATGGCAGGTCATCGTAGGCAGGGTAGTTGGCAGCCATTTACAGAAGAATCTGGTCAAGAGCATATGCTTTCTCGACCTTGTGACAGAAAACTGGAGGAAGATAACTTTCGCTCACGAGGGGATGGAAAGTATGGAAGGGTCTATAAGGAAAGTAGAGGAGCCTTTAGTCCGAGAGAATGGAAAGGGCGTCCGTGGGAAAGCCCGAGCAACTCTCTTAATATGTCCAGGAGGCAAACTGATGCATTTAATGAACGCAAGTCAGTTGATGATATGCCAACATATTCCCCTCATCCCAATTCTGGATTAACTGCTTGGGAACAACACCACATGAAAGACCAACATGATAAGATGGGTGGTATTAATCGATTTGGCGCAGGGCAGAGATACGATAGGGATACTTCTCTGGGTACGGTTGACTGGAAGCCACTTAAATGGACCCGGCCTGGATCTGTACGAGACTCAAGCTTTAGCCAATCAAGTGGCACAAGAAGCTTAGGAGGGTCTAATTCGAAGGGAACCTATGAAGGGAAGTATGGGTTACAACAAAAAGTGGCAACTACTGTTGAGTCAAATTCGAGGGAAACTGCTATATGTCGTACATCTTCTGCTCCATCTGAAGAGACAAATTCGAAGAAGAAGCCTAGGCTAAATTGGGGCGAAGGACTTGCAAAGTTTGAGAAGAAGCATGTTGAGGGACCCGAGACAACTTCAAACAAAGATGGACCTGTCTCACCCCCTTTTAATATGGAACCCAGTAATTTCCTCTGCCCCAGCTTAGTCGATAAAACGCCAAAAGTTTCAGAACTTTCAGGCTGTGCATCTCATGCAGCTCCAACAACTGCTGCCCGCAGCTCTTCACCAGGTGAAGATGATAAATTGTTTGGAAAAGCTGCAAATATGGACAATGATGTCGGTAGTTTGAGTAGTTCACCTGGCCCGGAGTCTCAAAATCATCTGCAGATGTTTTCTCTCAATTTAGAGAAGGTGGATATTGATTCATTGACTAGTTTGGGCCCTTCACTAGTTGAGTTGCCACAGTCTGAAGATCTGAGCTCTGTGGATTATAATTCATTAAGATCCACTACAATGGATAAGTTGCTGACATTGAAAGCCGGCATTTCAAAGGTATTAGAGGTGACTGAAACTGAAATTGATTCACTTGAAAATGAACATAGATCTCTAAAATCTGAATCTGAGGGTAGATTTCCATGTTCAGCAGCAGTAGGCTCTCTGCTATGTTACAATGGAAAACCTTGCTCTGATGACAAGGTTTCCTGTTTAGAGTCATCGCCGATTGTATCTTCTGACGACCTTATTGTGGAGAAGGTGCCTATTACAGAGAAGATGCCTCTTGCGACTAACTTTGTTAATATACGCGATAATTGCCTGGAAATTGATACTAACAGTGATGGACCTGCAAAGTCTAAAGTTGTAGAGCCTCTGCCCATAAATAATGCGGTTTCTTCATGTGATGTGAGGAGATATGGTTCTGGCTCTGAACACTTGGGTGGAGTTCATTCTACAGCCATGCAATGCTTAATTCCCTGTACTAATAGGCATGCTGCCAATGTCTCTGTTTGCAGTGATAGTAATTCATCTTTGGAGGTTAATGATGGTGTGGGTGCTAAGAGAAGTGCAAGCTCTTATTCTAGAACTGAGGACAATTTATATGATAAAATTATTTCTTGCAATAAAAAATCTGCAAAAGCAGCACATGAAGTATTTGCTAAGTTATTGCCTGAAAAATGTCGCAAGAATGGTAACATTGGAGCTAGCACTGGTTCATGCTCTCAGAATGGCACAATTATTATGGAAAAAATTGCAGAGAAAAGACGAATGGCAAGAGTGAAGGAGAGAGTTGCGACACTTAAGTATACAGCCCTGCACCACTTGTGGAAAGAAGATATGCGCTTACTGTCTATTAGGAAACAACGCCCAAAATCTCACAAGAAACTTGAAGCCAGTTATAATAATCAGAAGAAGCGGTCTTCTATTTCTTTTCGTTTTCCTTTCCCAGCAGGAAACCAACAAATGTTGGTTCCAACATCTGAGTTGATTAAGTATACAAGCCAACTACTTTCAGAATCCAAACACAAAATTCACAGAAGCACGTTAAAGATGCCAGCATTAATTTTGGATCAAAAGGACAAAATAAATTCAACATTTTCATCTAGTAATGGGCTGGTTGAAGATCCATTGGCTACTGAGAAAGAAAGAGCCATGATAAACCCTTGGACTTCAGAAGAGAGAGATATTTTCTTGAAGAAATTTTCTGCCTTTGGAAAAGATTTTCGGAAAATAGCTACATTCCTTGACCACAAGACGACGGCAGACTGTGTTGAGTTCTACTACAAAAATCACAAGTCTGATTGTTTTGAAAAAATGAAGAAAAAAGATGACGACAAGCTCAGGAAGTTTTATAAAGCCAAAACTGACTTGATGCCAAATACTTCTCCACTTGATATCTTGAGTGCAGCTTCAGTGATGGCACATGACATTGCAAGAAATCGGAGAATGCGTTCCGGGCGTGCTCTTTGGAGGGGATATAACATGTCTAATAGGCTGAAAAATTTCGAAGTTCTTCGAGATGAAAGAGAGACTGTTGCAGCTGATGTGTTAACCAGTATATGTGGTTCTGTTTTATCTGAGGCAACAAGTTCCTGCATAACTAGTTCAGTCAATCCTGTGAAAGGCAAAAGGGTCAGGAAGTGCGTGAAAGCAAAGCCTCTACGCAAACCACCTCCGACGCCAGAAATTACTCAAACTATTGATCATGAAACTTGTTCGGATGAGAGCTGTGGTGAAGTTGATCTTACTGATTGGACAGATGTGGAGAAGGCGGCCTTTCTTCATGCTGTATCATCCTTTGGAAAGGATTTTGCAATGATTGCACAGTGTGTCAGAACAAGATCCCAATACCATTGCAAAGTCTTTTTTAGCAAGACTCAGAAACGTCTCAGATTGAATCTCTTGGGTCACAGACCTGAAAATGTTGAATCATTAGGGGATGATGACGTGGATGGTGGCAGGAGCGACACAGATGCATGCAATGTAGAGACAGGTTCAGCCAATGGCTCTGATACTTCAGGCTCTAAAACTGGCGTGGACCAGCCTGCAGCTGATACGAACATGTATCATGATGAATCCAATACTGTAGATCATGAAGATGCAAATATGATTTCTAATGCATGTGTTATTGGGGGTGAGTCTAACCTGGACACTGATGGTAATGTAGGTGTCTTGTATGATTCTGAGAGGTCTGGCTCAGTGCGGGCTCAAGATGAACCACGCGAAGGGGGAATTGCAGGTACAAAATTGGTGTCTGGTATGGAGATAATTGAATCATGCTACCCTATTTCTGTTGGTGATGGTAGACTGGTTTCTGATGTTTCTTCTGGCCAACAGGGAAATGAATTGGAGGGTTCAAGAATACGTCTAGTTGATAAAGATGAAGCTGATACAGGTGTTGAAGTTCAATTGAACGATACAAGCACTTTGGTGAATACGTCACTATCATCTGCTGAAGTTTCTTATTCAAGATCGACTGTTGATGCTGGAAATGAGCCCCAACCACGCCTTGAAAATCCTCCATTCTCAGGACCATCAGAGGGTCCTCTTACAAATGCAAATCTTGGCTACCAGCTTTGTAATCCTGGTAATTTGTTGGACCATGTTGAGGCTGCCAGAGTTCATCAGTGCTGTAATATGCAAGTGCATTCTGAGAAGGAACTGAATGTGAATATGAGCTGCAGCAGTTCAGCAACGGAAGAAGCACCGAAAAATGATGTGAAAATATTCGGGAAGATCTTGACCATTCCCTCATCCACCCAGAAGCTTAATTTAAGTGTAAAGGGAAATGATGAAAATGGTACACATCACCCGAATTCAAACACTGCCTCTTCTAGTCTGAAATCAGCCTGCCATGCTAGTGCTGGTGAAAAAATCCCGGTTCTGGAGGTTGATCTTAATGACTGCCAGGTCATTGAAACTGTTCCCATTGTAAGTTATATCAATGGGATCAAAGTTCAGCCTGGTTTCTCACCACTCCCTGATTCTGCTTTTTTGCTTGCTAAGTATCCTGCTGCATTTGGTAGTTATTCAACATCTGCCATATTAGCGCAAGAGTCACCGCAGGCATTGGCCAAGAATGATAGCCAGCACCTGGGCAAAGCACCTGCATTTACATCTGGAGAAGTAAATGGAAGCAATGGCGTGATTGGTTATCAAATATTCAGAGAACGGGAAGATCTGCATATGCATCCATTCATGGAAAATGACCTGCAAAAAAGTAATGATTTTGAAGCAATTTCAAGTTTGCAGCAGCAGGTCGCAGAAATGGTGGAAACTGGTGCTGTTGGGAAGCCAGGGATTCTTGTTGGAGAATCCAAGAGTGTTATCTCTGATCCTGTGGCAGCCATTAAAATGCAGCCTTCCTTTGCTAACCAGTTTGTTGGCCAATCCGGGAGAGTGATGAAAGAGGCGGAGTCTTTGACTGGGAAAGAAGACCTCGATAGTTAA 4659 0.428 MSLEPLDRKRKYESSESLGTVGRWRGSSSHHHHHRPQQFNRPGNFRRMAGHRRQGSWQPFTEESGQEHMLSRPCDRKLEEDNFRSRGDGKYGRVYKESRGAFSPREWKGRPWESPSNSLNMSRRQTDAFNERKSVDDMPTYSPHPNSGLTAWEQHHMKDQHDKMGGINRFGAGQRYDRDTSLGTVDWKPLKWTRPGSVRDSSFSQSSGTRSLGGSNSKGTYEGKYGLQQKVATTVESNSRETAICRTSSAPSEETNSKKKPRLNWGEGLAKFEKKHVEGPETTSNKDGPVSPPFNMEPSNFLCPSLVDKTPKVSELSGCASHAAPTTAARSSSPGEDDKLFGKAANMDNDVGSLSSSPGPESQNHLQMFSLNLEKVDIDSLTSLGPSLVELPQSEDLSSVDYNSLRSTTMDKLLTLKAGISKVLEVTETEIDSLENEHRSLKSESEGRFPCSAAVGSLLCYNGKPCSDDKVSCLESSPIVSSDDLIVEKVPITEKMPLATNFVNIRDNCLEIDTNSDGPAKSKVVEPLPINNAVSSCDVRRYGSGSEHLGGVHSTAMQCLIPCTNRHAANVSVCSDSNSSLEVNDGVGAKRSASSYSRTEDNLYDKIISCNKKSAKAAHEVFAKLLPEKCRKNGNIGASTGSCSQNGTIIMEKIAEKRRMARVKERVATLKYTALHHLWKEDMRLLSIRKQRPKSHKKLEASYNNQKKRSSISFRFPFPAGNQQMLVPTSELIKYTSQLLSESKHKIHRSTLKMPALILDQKDKINSTFSSSNGLVEDPLATEKERAMINPWTSEERDIFLKKFSAFGKDFRKIATFLDHKTTADCVEFYYKNHKSDCFEKMKKKDDDKLRKFYKAKTDLMPNTSPLDILSAASVMAHDIARNRRMRSGRALWRGYNMSNRLKNFEVLRDERETVAADVLTSICGSVLSEATSSCITSSVNPVKGKRVRKCVKAKPLRKPPPTPEITQTIDHETCSDESCGEVDLTDWTDVEKAAFLHAVSSFGKDFAMIAQCVRTRSQYHCKVFFSKTQKRLRLNLLGHRPENVESLGDDDVDGGRSDTDACNVETGSANGSDTSGSKTGVDQPAADTNMYHDESNTVDHEDANMISNACVIGGESNLDTDGNVGVLYDSERSGSVRAQDEPREGGIAGTKLVSGMEIIESCYPISVGDGRLVSDVSSGQQGNELEGSRIRLVDKDEADTGVEVQLNDTSTLVNTSLSSAEVSYSRSTVDAGNEPQPRLENPPFSGPSEGPLTNANLGYQLCNPGNLLDHVEAARVHQCCNMQVHSEKELNVNMSCSSSATEEAPKNDVKIFGKILTIPSSTQKLNLSVKGNDENGTHHPNSNTASSSLKSACHASAGEKIPVLEVDLNDCQVIETVPIVSYINGIKVQPGFSPLPDSAFLLAKYPAAFGSYSTSAILAQESPQALAKNDSQHLGKAPAFTSGEVNGSNGVIGYQIFREREDLHMHPFMENDLQKSNDFEAISSLQQQVAEMVETGAVGKPGILVGESKSVISDPVAAIKMQPSFANQFVGQSGRVMKEAESLTGKEDLDS 1552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi486g00002 1552 Gene3D - 959 1042 - -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 322 362 - -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 1043 1059 - -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 68 106 - -
Vivi486g00002 1552 SUPERFAMILY Homeodomain-like 775 835 IPR009057 -
Vivi486g00002 1552 Coils Coil 417 444 - -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 230 252 - -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 1043 1093 - -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 26 40 - -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 197 223 - -
Vivi486g00002 1552 ProSiteProfiles SANT domain profile. 983 1034 IPR017884 -
Vivi486g00002 1552 ProSiteProfiles SANT domain profile. 787 838 IPR017884 -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 253 282 - -
Vivi486g00002 1552 CDD SANT 988 1026 IPR001005 -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 1225 1253 - -
Vivi486g00002 1552 SMART sant 984 1032 IPR001005 -
Vivi486g00002 1552 SMART sant 788 836 IPR001005 -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 1 16 - -
Vivi486g00002 1552 SUPERFAMILY Homeodomain-like 986 1034 IPR009057 -
Vivi486g00002 1552 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1295 1540 - -
Vivi486g00002 1552 Gene3D - 768 840 - -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 1329 1350 - -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 1062 1093 - -
Vivi486g00002 1552 MobiDBLite consensus disorder prediction 1 296 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi486g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi486g00002 - - psat:127126546 2523.04