Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi486g00001 ATGTCGCTGGAACCGTTGGATCGAAAGAGGAAGTACGAGAGCTCCGAGTCTCTAGGGACTGTGGGTAGATGGAGAGGCTCTTCTTCTCATCATCACCACCACCGTCCTCAACAGTTCAATCGGCCTGGCAATTTTAGGAGAATGGCAGGTCATCGTAGGCAGGGTAGTTGGCAGCCATTTACAGAAGAATCTGGTCAAGAGCATATGCTTTCTCGACCTTGTGACAGAAAACTGGAGGAAGATAACTTTCGCTCACGAGGGGATGGAAAGTATGGAAGGGTCTATAAGGAAAGTAGAGGAGCCTTTAGTCCGAGAGAATGGAAAGGGCGTCCGTGGGAAAGCCCGAGCAACTCTCTTAATATGTCCAGGAGGCAAACTGATGCATTTAATGAACGCAAGTCAGTTGATGATATGCCAACATATTCCCCTCATCCCAATTCTGGATTAACTGCTTGGGAACAACACCACATGAAAGACCAACATGATAAGATGGGTGGTATTAATCGATTTGGCGCAGGGCAGAGATACGATAGGGATACTTCTCTGGGTACGGTTGACTGGAAGCCACTTAAATGGACCCGGCCTGGATCTGTACGAGACTCAAGCTTTAGCCAATCAAGTGGCACAAGAAGCTTAGGAGGGTCTAATTCGAAGGGAACCTATGAAGGGAAGTATGGGTTACAACAAAAAGTGGCAACTACTGTTGAGTCAAATTCGAGGGAAACTGCTATATGTCGTACATCTTCTGCTCCATCTGAAGAGACAAATTCGAAGAAGAAGCCTAGGCTAAATTGGGGCGAAGGACTTGCAAAGTTTGAGAAGAAGCATGTTGAGGGACCCGAGACAACTTCAAACAAAGATGGACCTGTCTCACCCCCTTTTAATATGGAACCCAGTAATTTCCTCTGCCCCAGCTTAGTCGATAAAACGCCAAAAGTTTCAGAACTTTCAGGCTGTGCATCTCATGCAGCTCCAACAACTGCTGCCCGCAGCTCTTCACCAGGTGAAGATGATAAATTGTTTGGAAAAGCTGCAAATATGGACAATGATGTCGGTAGTTTGAGTAGTTCACCTGGCCCGGAGTCTCAAAATCATCTGCAGATGTTTTCTCTCAATTTAGAGAAGGTGGATATTGATTCATTGACTAGTTTGGGCCCTTCACTAGTTGAGTTGCCACAGTCTGAAGATCTGAGCTCTGTGGATTATAATTCATTAAGATCCACTACAATGGATAAGTTGCTGACATTGAAAGCCGGCATTTCAAAGGTATTAGAGGTGACTGAAACTGAAATTGATTCACTTGAAAATGAACATAGATCTCTAAAATCTGAATCTGAGGGTAGATTTCCATGTTCAGCAGCAGTAGGCTCTCTGCTATGTTACAATGGAAAACCTTGCTCTGATGACAAGGTTTCCTGTTTAGAGTCATCGCCGATTGTATCTTCTGACGACCTTATTGTGGAGAAGGTGCCTATTACAGAGAAGATGCCTCTTGCGACTAACTTTGTTAATATACGCGATAATTGCCTGGAAATTGATACTAACAGTGATGGACCTGCAAAGTCTAAAGTTGTAGAGCCTCTGCCCATAAATAATGCGGTTTCTTCATGTGATGTGAGGAGATATGGTTCTGGCTCTGAACACTTGGGTGGAGTTCATTCTACAGCCATGCAATGCTTAATTCCCTGTACTAATAGGCATGCTGCCAATGTCTCTGTTTGCAGTGATAGTAATTCATCTTTGGAGGTTAATGATGGTGTGGGTGCTAAGAGAAGTGCAAGCTCTTATTCTAGAACTGAGGACAATTTATATGATAAAATTATTTCTTGCAATAAAAAATCTGCAAAAGCAGCACATGAAGTATTTGCTAAGTTATTGCCTGAAAAATGTCGCAAGAATGGTAACATTGGAGCTAGCACTGGTTCATGCTCTCAGAATGGCACAATTATTATGGAAAAAATTGCAGAGAAAAGACGAATGGCAAGAGTGAAGGAGAGAGTTGCGACACTTAAGTATACAGCCCTGCACCACTTGTGGAAAGAAGATATGCGCTTACTGTCTATTAGGAAACAACGCCCAAAATCTCACAAGAAACTTGAAGCCAGTTATAATAATCAGAAGAAGCGGTCTTCTATTTCTTTTCGTTTTCCTTTCCCAGGAAACCAACAAATGTTGGTTCCAACATCTGAGTTGATTAAGTATACAAGCCAACTACTTTCAGAATCCAAACACAAAATTCACAGAAGCACGTTAAAGATGCCAGCATTAATTTTGGATCAAAAGGACAAAATAAATTCAACATTTTCATCTAGTAATGGGCTGGTTGAAGATCCATTGGCTACTGAGAAAGAAAGAGCCATGATAAACCCTTGGACTTCAGAAGAGAGAGATATTTTCTTGAAGAAATTTTCTGCCTTTGGAAAAGATTTTCGGAAAATAGCTACATTCCTTGACCACAAGACGACGGCAGACTGTGTTGAGTTCTACTACAAAAATCACAAGTCTGATTGTTTTGAAAAAATGAAGAAAAAAGATGACGACAAGCTCAGGAAGTTTTATAAAGCCAAAACTGACTTGATGCCAAATACTTCTCCACTTGATATCTTGAGTGCAGCTTCAGTGATGGCACATGACATTGCAAGAAATCGGAGAATGCGTTCCGGGCGTGCTCTTTGGAGGGGATATAACATGTCTAATAGGCTGAAAAATTTCGAAGTTCTTCGAGATGAAAGAGAGACTGTTGCAGCTGATGTGTTAACCAGTATATGTGGTTCTGTTTTATCTGAGGCAACAAGTTCCTGCATAACTAGTTCAGTCAATCCTGTGAAAGGCAAAAGGGTCAGGAAGTGCGTGAAAGCAAAGCCTCTACGCAAACCACCTCCGACGCCAGAAATTACTCAAACTATTGATCATGAAACTTGTTCGGATGAGAGCTGTGGTGAAGTTGATCTTACTGATTGGACAGATGTGGAGAAGGCGGCCTTTCTTCATGCTGTATCATCCTTTGGAAAGGATTTTGCAATGATTGCACAGTGTGTCAGAACAAGATCCCAATACCATTGCAAAGTCTTTTTTAGCAAGACTCAGAAACGTCTCAGATTGAATCTCTTGGGTCACAGACCTGAAAATGTTGAATCATTAGGGGATGATGACGTGGATGGTGGCAGGAGCGACACAGATGCATGCAATGTAGAGACAGGTTCAGCCAATGGCTCTGATACTTCAGGCTCTAAAACTGGCGTGGACCAGCCTGCAGCTGATACGAACATGTATCATGATGAATCCAATACTGTAGATCATGAAGATGCAAATATGATTTCTAATGCATGTGTTATTGGGGGTGAGTCTAACCTGGACACTGATGGTAATGTAGGTGTCTTGTATGATTCTGAGAGGTCTGGCTCAGTGCGGGCTCAAGATGAACCACGCGAAGGGGGAATTGCAGGTACAAAATTGGTGTCTGGTATGGAGATAATTGAATCATGCTACCCTATTTCTGTTGGTGATGGTAGACTGGTTTCTGATGTTTCTTCTGGCCAACAGGGAAATGAATTGGAGGGTTCAAGAATACGTCTAGTTGATAAAGATGAAGCTGATACAGGTGTTGAAGTTCAATTGAACGATACAAGCACTTTGGTGAATACGTCACTATCATCTGCTGAAGTTTCTTATTCAAGATCGACTGTTGATGCTGGAAATGAGCCCCAACCACGCCTTGAAAATCCTCCATTCTCAGGACCATCAGAGGGTCCTCTTACAAATGCAAATCTTGGCTACCAGCTTTGTAATCCTGGTAATTTGTTGGACCATGTTGAGGCTGCCAGAGTTCATCAGTGCTGTAATATGCAAGTGCATTCTGAGAAGGAACTGAATGTGAATATGAGCTGCAGCAGTTCAGCAACGGAAGAAGCACCGAAAAATGATGTGAAAATATTCGGGAAGATCTTGACCATTCCCTCATCCACCCAGAAGCTTAATTTAAGTGTAAAGGGAAATGATGAAAATGGTACACATCACCCGAATTCAAACACTGCCTCTTCTAGTCTGAAATCAGCCTGCCATGCTAGTGCTGGTGAAAAAATCCCGGTTCTGGAGGTTGATCTTAATGACTGCCAGGTCATTGAAACTGTTCCCATTGTAAGTTATATCAATGGGATCAAAGTTCAGCCTGGTTTCTCACCACTCCCTGATTCTGCTTTTTTGCTTGCTAAGTATCCTGCTGCATTTGGTAGTTATTCAACATCTGCCATATTAGCGCAAGAGTCACCGCAGGCATTGGCCAAGAATGATAGCCAGCACCTGGGCAAAGCACCTGCATTTACATCTGGAGAAGTAAATGGAAGCAATGGCGTGATTGGTTATCAAATATTCAGAGAACGGGAAGATCTGCATATGCATCCATTCATGGAAAATGACCTGCAAAAAAGTAATGATTTTGAAGCAATTTCAAGTTTGCAGCAGCAGGTCGCAGAAATGGTGGAAACTGGTGCTGTTGGGAAGCCAGGGATTCTTGTTGGAGAATCCAAGAGTGTTATCTCTGATCCTGTGGCAGCCATTAAAATGCAGCCTTCCTTTGCTAACCAGTTTGTTGGCCAATCCGGGAGAGTGATGAAAGAGGCGGAGTCTTTGACTGGGAAAGAAGACCTCGATAGTTAA 4656 0.4278 MSLEPLDRKRKYESSESLGTVGRWRGSSSHHHHHRPQQFNRPGNFRRMAGHRRQGSWQPFTEESGQEHMLSRPCDRKLEEDNFRSRGDGKYGRVYKESRGAFSPREWKGRPWESPSNSLNMSRRQTDAFNERKSVDDMPTYSPHPNSGLTAWEQHHMKDQHDKMGGINRFGAGQRYDRDTSLGTVDWKPLKWTRPGSVRDSSFSQSSGTRSLGGSNSKGTYEGKYGLQQKVATTVESNSRETAICRTSSAPSEETNSKKKPRLNWGEGLAKFEKKHVEGPETTSNKDGPVSPPFNMEPSNFLCPSLVDKTPKVSELSGCASHAAPTTAARSSSPGEDDKLFGKAANMDNDVGSLSSSPGPESQNHLQMFSLNLEKVDIDSLTSLGPSLVELPQSEDLSSVDYNSLRSTTMDKLLTLKAGISKVLEVTETEIDSLENEHRSLKSESEGRFPCSAAVGSLLCYNGKPCSDDKVSCLESSPIVSSDDLIVEKVPITEKMPLATNFVNIRDNCLEIDTNSDGPAKSKVVEPLPINNAVSSCDVRRYGSGSEHLGGVHSTAMQCLIPCTNRHAANVSVCSDSNSSLEVNDGVGAKRSASSYSRTEDNLYDKIISCNKKSAKAAHEVFAKLLPEKCRKNGNIGASTGSCSQNGTIIMEKIAEKRRMARVKERVATLKYTALHHLWKEDMRLLSIRKQRPKSHKKLEASYNNQKKRSSISFRFPFPGNQQMLVPTSELIKYTSQLLSESKHKIHRSTLKMPALILDQKDKINSTFSSSNGLVEDPLATEKERAMINPWTSEERDIFLKKFSAFGKDFRKIATFLDHKTTADCVEFYYKNHKSDCFEKMKKKDDDKLRKFYKAKTDLMPNTSPLDILSAASVMAHDIARNRRMRSGRALWRGYNMSNRLKNFEVLRDERETVAADVLTSICGSVLSEATSSCITSSVNPVKGKRVRKCVKAKPLRKPPPTPEITQTIDHETCSDESCGEVDLTDWTDVEKAAFLHAVSSFGKDFAMIAQCVRTRSQYHCKVFFSKTQKRLRLNLLGHRPENVESLGDDDVDGGRSDTDACNVETGSANGSDTSGSKTGVDQPAADTNMYHDESNTVDHEDANMISNACVIGGESNLDTDGNVGVLYDSERSGSVRAQDEPREGGIAGTKLVSGMEIIESCYPISVGDGRLVSDVSSGQQGNELEGSRIRLVDKDEADTGVEVQLNDTSTLVNTSLSSAEVSYSRSTVDAGNEPQPRLENPPFSGPSEGPLTNANLGYQLCNPGNLLDHVEAARVHQCCNMQVHSEKELNVNMSCSSSATEEAPKNDVKIFGKILTIPSSTQKLNLSVKGNDENGTHHPNSNTASSSLKSACHASAGEKIPVLEVDLNDCQVIETVPIVSYINGIKVQPGFSPLPDSAFLLAKYPAAFGSYSTSAILAQESPQALAKNDSQHLGKAPAFTSGEVNGSNGVIGYQIFREREDLHMHPFMENDLQKSNDFEAISSLQQQVAEMVETGAVGKPGILVGESKSVISDPVAAIKMQPSFANQFVGQSGRVMKEAESLTGKEDLDS 1551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi486g00001 1551 ProSiteProfiles SANT domain profile. 982 1033 IPR017884 -
Vivi486g00001 1551 Gene3D - 958 1041 - -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 1328 1349 - -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 1042 1092 - -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 322 362 - -
Vivi486g00001 1551 SUPERFAMILY Homeodomain-like 774 834 IPR009057 -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 68 106 - -
Vivi486g00001 1551 CDD SANT 987 1025 IPR001005 -
Vivi486g00001 1551 Coils Coil 417 444 - -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 230 252 - -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 26 40 - -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 197 223 - -
Vivi486g00001 1551 SMART sant 983 1031 IPR001005 -
Vivi486g00001 1551 SMART sant 787 835 IPR001005 -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 253 282 - -
Vivi486g00001 1551 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1294 1539 - -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 1061 1092 - -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 1 16 - -
Vivi486g00001 1551 SUPERFAMILY Homeodomain-like 985 1033 IPR009057 -
Vivi486g00001 1551 ProSiteProfiles SANT domain profile. 786 837 IPR017884 -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 1224 1252 - -
Vivi486g00001 1551 Gene3D - 767 839 - -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 1 296 - -
Vivi486g00001 1551 MobiDBLite consensus disorder prediction 1042 1058 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi486g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi486g00001 - - psat:127126546 2516.88