Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi485g00033 ATGTCTCATCCAAAGTACAATGTGTTCCTCAGCTTTAGAGGAGAGGACACTCGTGACAACTTTACGAGTCATCTTCGTGCAGAATTGTGTAGGCAAAGGATTGAAACATTCATAGATGATGATAAACTTGACAGAGGCGAAGAGATTTCACCAGCACTGTGCAAAGCAATAGAAGCATCAGCGATTTATGTGGTTATTTTGTCGGAACACTATGCTTCTTCCACTTGGTGCTTAGATGAACTCACAAAGATACTAGAATGTAAGGAGAGATATGGAAGGGAAGTGATACCTGTCTTCTACAAAGTGGATCCGTCAAATGTTAGGCATCAGAGACAGAGTTATGCAGACGATTTATTTAAACATCAACGACGATTTGGAGACAAAGTGGACCCATGGAAGGCTGCTCTAACCCAAGTAGCTAATCTCTCTGGCTTGGATTCTCAGAAAATCAGGCCAGATAGTAAACTTGTTGAAGAGATTGTGAAAGATATTCTGAAAAAATTGAATAGTTGTATCTCAAATGATCATGAAGGAAATATTGGAATTGACAAGCATATTGAACAAATCCAAACCTTGTTGCACCTCGAGTCATCGACAGTTCGTACTATAGGAATATGGGGTATGGGAGGGATAGGAAAAACTGAAATTGCCTGTGCAATCTATGAAAAACTTGCAACTCATTTTAGTTCCAGTGGCATAGTTAAAAATGTTCAACAGGAAATAAAGATATATGGAGTAGACCATGTAAAAAGCAAATACTTATCACACCTTCTAGTTCAACAAGGCATTACTTCCTCTGGACTCAACTTTTTATTTGATCCTAGGCTCAAACGTACAAAGGTTCTTCTTGTTTTTGATGATGTGAAAGATTCTGATCAATTTATTGATTTGATTGGAACATGTAGTAATTTTGGCCACGGGAGTAGAATCATCGTGACAAGTAGAGACAAACAAGTGCTTAAGAATGCTAATGTTGATGAAATGTATCATGTAGTTCAGATGGATGATAAAGATTCTCTACAACTATTTTGTTTAAATGCATTTAAACAAAGAGAACCAATAGAAGCTTATGCGAGTTTAACAGAAAAGGTATTAAATTATGCTAAAGGAGTTCCATTAGCTCTTAAAGTTTTGGGCTTATTTCTCCAGGGTAGAACAAAGGAAGCATGGGAAAGTGAGTTGCAAAAGCTCAAAAAGATTCCCAATCCTAAAATTTTCAGTATTTTGAAGTTGAGTTTTGATGGACTTGATGACGAACAAAAAGAAATATTTCTTGATATAGCTTGTTTCTACAGAGGAGAAACCGAGAAACTTATTGTTCAAACATTGGATTGTTATGGTTTTTCTACTCGTATTGGAATGGATGTTCTTCAAGATAGGTGTCTTATATCTATTTTAGAAGATAAAGTTTGGATGCATGATCGAATTCAAGAAATGGGACATGAAATTATTCGACAACAAAGTGTCAATAATCCGGAAAAACGTAATCGATTGCACAAACCTGATGATATATATGATGTTTTAAAAAAGAACAAGGGAACAGATGCAATCCAGGGTATATTATTGAACCTAGGCGAAATAAAGAAAGTTAAATTACATTCTGAAACTTTTAAGAATATGCTTAATCTCAGAATGATCCGGTTCTATGATCCTTATAGGTTTAAAAGTTACTTAAATGTGACTTTTTATACATTCTTGAATGGTTTTTCGGATAATTTGAAATTTCTTAGTTGGGATGGTTTCCCTCAAAGATCTCTGCCGCAAGACTTTTGCCCAGATAATCTTGTTGCACTTGATATGCCTTATAGTGATCTTGAACAACTTTGGAAGAAAGATAAGACTTTACCAAATTTGAAGAGACTTAACCTTAGCTGTTCTCAGAAGATGATTGGAATACCAGACCTGTCTTTGTTTCCAAATATTGAAGAAATAATTCTCAGTGGTTGTGTAAGTTTGGAACAAGTTTACTCCTCTAGCATCCTCCACAAACTTAACTGGTTATATGCAGATGGTTGTACATCACTCAAGAGTTTAAGTATTCCTAGCAATATTCTATCAAGATCAACTGGATCAGTTCATCTGTATGGCTGTCACAACCTTGAAACAATTTTAGTCACCAGTACAACTGATGTTGTTCAATCATACAGTTGTTTTAATTCCTATGAGTCAAATTTTGAGGGAGGCGACTGGATTGGGGATGTGGATATAGATTCCGATATGTTTCCAAGTATCAGTAGGTTAGATCTTTCGGAATGTGAGTCCCTAACATGCCTACCAGCTGAACTTATAAATTTGAAGTTTCTGACAAGACTTTGTCTCGGTGGTTGTTTAAAGTTGGAAGAGTTACCTGAAATCGAGGAGATTATGGAAAATCTAAAAGTGCTCAACTTAGAAAAAATAGCAATACAGGAACTACCTTCAACGCTACACCGTTTGGTTGGGCTTGAAGAATTGAGTTTGCGAGAAATCCCAAGTGACATTGGTCGTATGTCATTCTTGACTAAAATTTCACTTCAAGGAGGCAGAATTGTGAATCTTCCTGAGAGTATTGTTCATCTCTCAAGTTTGAAATCACTTAATTTAAGTGATTGCAAAAGCCTTGAATGTATTCCAAAGCTTCCACCATGTCTAAATGAGTTGTTGGCATTAAATTGCACATCCATTAAGAAAGTGGTGCCAAATTCATGGTTGAAACTCATGTCAGATTACAATGACGAAATAGATGATTTCTACGAATTCCGTCTCACCAACAGTGAAGAGTTAGACGCATCTTCTTGGAGTTATATCGTAAACAAAGCATGGATTAAGATCGCTGATGATGGATATCGGTCAGCGCTCTTCTGCTTTCCAGGGAGTAGAGTTCCGGATTGGTTCCTTCACCGAGGCCAGGGACATTCAATAACTGTGAAAAATAATGATGGATATGTGTGCAGTGAAAATGGGCTCATTGGTTTCGCTCTCTGTGTTGTTTTTGGAGGTGATGACACAAGAACAAGAGGCAGTAGAATTACATACAAATTAAGCCTTTTATATGATGATAAGTCATTCGTTTTTTATGACGATTTGAATTGGAAGCCAGAAGATAGTTGTATCATCCGAGATCACACATTCTTATGGAAATATCAATTAGACCGAGCAAGCGTTGGCAACAACCTCATTCATGCCCAAAACTTCACTTTTGAGATCATAGGTGATTATTTTAGGCGCTCAGATTGTCAATTAAACATAATGGTGAACGAGTGTGGAATTCATCCTCTTTCTATTGCTATGTCTCATCCAAAGTACGATGTGTTCCTCAGCTTTAGAGGAGAGGACACTCGTGACAACTTCACCAGTCATCTTCATGCAGAATTGTGTAGGCAAAGGATTGAAACATTCATTGATAATAGACTTGTCAGGGGCGAAGAAATTTCTCCAGCACTGTGCAAAGCAATAGAAGAATCAGCTATTTATGTGGTTATTTTGTCAAAACACTATGCTTCTTCTACGTGGTGCTTAGATGAACTCACAAAGATACTCGAATGTAAGGAGAGATATGGAAGGGAAGTGATACCTGTCTTCTATAGGGTGGATCCGTCAAATGTTAGGCATCAGAAAAAGAGTTATGCTGACGATTTTGTTAAACATCTGCCATTAGGCGACAAAGTGGACGCATGGAAGGCTGCTCTAACCCAAGTAGCTAAACTCTCTGGCTGGGATTCACAGAAAATCAGGCCAGATAGCACACTTGTTGAAGAGATTGTGAAAGATATTCTGAAAAAGTTGAGTCCTTGTGGCTTATATAATCATGAAGGAAAGATTGGAATTGACAAGCATATTGAACAAATCCAAAACTTGTTGCACCTCGAGTCATCGGCTGTCCATATTATAGGAATATGGGGTATGGGAGGGATAGGAAAAACTGAAATTGCCGGTGCAATTTATGAAAAACTCGCAACTCATTTTAATTCTAGAGGCATAGTAAAAAACGTTCAACAGGAAATAGAAAAATATGGAGTAGACAATGTTAAAAGCAAATACTTATCACACCTTCTTGATAAACAAGACATTACTTCCTCTAGATTCAAACAGACAAAGGTTCTTCTTGTTTTTGATGATGTCAAAGATTCTGATCAATTTATTGATTTAATTGGGACATGTAGTAATTTTGTCCACGGGAGTAGAATTATTGTGACTAGTAGAGACAAACAAGTACTTAAGAATGCCAATGTTGATGAAATGTATCACGTAGTTGAGATGAACGAAAAAGATTCTCTACAACTCTTCTGTTTAAATGCCTTTAAACAAAAAGAACCAATAGAAACTTATGCGAGTTTAACAAAAAAGGTATTAAATTATGCTAAAGGAGTTCCATTAGCTCTTAAAGTTTTGGGCCTATTTCTTCAGGGTAGAGCAAAGGAAGCATGGGAAAGTGAGTTGCAAAAGCTTGAAAAGAATCCCGAGCCTAAAATTTTCAATGTGTTGAAATTGAGCTATGATGGACTTGACGACGAACAAAAAGATATATTTCTTGATATAGCTTGTTTCTGTAGAGGAGAAACCGAGAAATGTGTGGTTCAAACACTGGATTGTTATGGTTTTTCTACTCGTATTGGAATGGATGTTCTTCAAGATAGGTGTCTTATATCTATTTTAGAAGGTAGAGTTTGGATGCATGATCGAATACAAGAAATGGGACATGAAGTTGTTCGACAGCAAAGTGTCAATAATCCGGAAAAACGTAGTCGATTGCACAAACCTGAAGATATATATAATGTTTTAAAAAAGAACAAGGGACAGGGAACAGATGCAATCCAGAGCATAGCATTGGACTTAAGCAAAATAAACGAAGTTCAGTTACATGCCAAAACTTTTAAGAAAATGCATAATCTCAGAATGATTAAGTTCTATAATTCTTATTGGTTTGAAAGTTACTCAAATGTGACATTTCATACATTTCTTAATAGTTTTCCAGATAATCTAAAATTTCTTGGTTGGGTTGGTTTCCCTCAAAGATCTTTGCCGCAAGATTTTTGCCCAAATAATCTTGTTGCACTTGATATGCATTCAAGCGATCTTGAACAACTATGGAAGAGAGATCAGACTTTACCAAATTTGAAGAGACTTAACCTTAGCTGTTCTCAGAAGATGATTGGAGTACCAGACCTGTCTTTGTTTCCAAATATTGAAGAAATAATTCTCAGTGGCTGTGTAAGTTTGAAAAAAGTGTACTCCTCTAACTTCCTCCACAAACTTAACCGGTTATGTGTAGATGGATGTACATCACTCAAGAGTTTAAGTATTCGTAGTAATATTCTATCAAGATCAACCGGATTAGTTGCTCTGCATGGTTGTCGCAACCTTGAAACAATTCTAATCACCGGAACAACGGATGTGGTTCAAACATACAGTATTGTTAATTCCTATGAGTCAAATTTTGAGGGAGGCGACTGGATTGGGGATATGGATTCAGATATGTTTTCAAGTATCAGTGAGCTTTGTTTGTTAGATCTTTCGGAATGTGAGTCCCTAACATGCCTACCAGCTGAACTTATAAATTTGAAGTTTCTAACAAGACTTTGTCTCAGTGATTGTTTAAAGTTGGAAGAGTTACCTGAAATCAAGGAGATTATAGAAAATCTAAAAGTGCTCAACTTAGAAAAAACAGCAATAAAGGAACTACCTTCATCGCTACACCGTTTGGTCGGGCTTGAAGAATTGAGTTTGCGAGGTTGCAAAAAGCTTAAGACTATTCCATCTTCCATTGGAAATCTCAGCAAACTTGTTAAGTTAGACATTACCTACTGTAAATCACTTGAAACTTTTCCAAGCAGCATTTTCAAATTGAAGTTGACAGAACTTGATTTTTCGGGTTGCTCAATGCTTAGGATTTTTCCAGAAATCCCAAGTGACATTGGTCGTATGTCATTCTTGACTAAAATTTCACTTCAAGGAAGCAGAATTGTGAATCTTCCTGAGAGTATGGTTCATCTCTCAAGTTTGAAATCACTTAATTTAAGTGATTGCAAAAGCCTTGAATGTATTCCAAAGCTTCCACAGAATCTAATTCAGTTGTTGGCATTTGATTGCACATCCATTAAGAAAGTGGTGCGAAATTCATTGTTGGCACTCATGTCTGATTCCAATGACAAAATGGATGGTTCCTACGAATTTCTTCTCACCAACAGTGAAGAGTTAGATGCATTTTCTTGGAATTATATAGTAAACAAAGCATGTATTAAGATCACTGATAATGCATATCTGTCAGCGGTCTTTTGTTTTCCGGGGAGTAGAGTTCCAGATTGGTTCCTTCACCGTTGCCACGGGCATTCAATAACTGTGAAAAATAATGATGAATATGTGTGCAGTGAAAACAGGCTCATTGGTTTTGCTCTGTGTGTTGTTTTAGGAGGTGAAGATATGGATGACTCAAGAAGAGGTAGTAGCATTACATACAAATTAAGCTTTATATCAGATGGTAAGCCATTCGTTTTTCATGACGATATGAATTGGATGCTGGGAGATAGATTTATCATCCGAGATCACACATTCCTATGGAAATATGAATTAGACCGAGCAACCATTTGCAACAAGCTCATTCATGCCCAAAGTTTCACTTTTGAGATCCTAGGTGATGATTATGTTAGGCCCTCAGATTATCAATTAAACGTAATTGTGAAAGAGTGTGCAATATGTCCTCTGTATATTCGAAAGAACCAAATGTGA 6705 0.3661 MSHPKYNVFLSFRGEDTRDNFTSHLRAELCRQRIETFIDDDKLDRGEEISPALCKAIEASAIYVVILSEHYASSTWCLDELTKILECKERYGREVIPVFYKVDPSNVRHQRQSYADDLFKHQRRFGDKVDPWKAALTQVANLSGLDSQKIRPDSKLVEEIVKDILKKLNSCISNDHEGNIGIDKHIEQIQTLLHLESSTVRTIGIWGMGGIGKTEIACAIYEKLATHFSSSGIVKNVQQEIKIYGVDHVKSKYLSHLLVQQGITSSGLNFLFDPRLKRTKVLLVFDDVKDSDQFIDLIGTCSNFGHGSRIIVTSRDKQVLKNANVDEMYHVVQMDDKDSLQLFCLNAFKQREPIEAYASLTEKVLNYAKGVPLALKVLGLFLQGRTKEAWESELQKLKKIPNPKIFSILKLSFDGLDDEQKEIFLDIACFYRGETEKLIVQTLDCYGFSTRIGMDVLQDRCLISILEDKVWMHDRIQEMGHEIIRQQSVNNPEKRNRLHKPDDIYDVLKKNKGTDAIQGILLNLGEIKKVKLHSETFKNMLNLRMIRFYDPYRFKSYLNVTFYTFLNGFSDNLKFLSWDGFPQRSLPQDFCPDNLVALDMPYSDLEQLWKKDKTLPNLKRLNLSCSQKMIGIPDLSLFPNIEEIILSGCVSLEQVYSSSILHKLNWLYADGCTSLKSLSIPSNILSRSTGSVHLYGCHNLETILVTSTTDVVQSYSCFNSYESNFEGGDWIGDVDIDSDMFPSISRLDLSECESLTCLPAELINLKFLTRLCLGGCLKLEELPEIEEIMENLKVLNLEKIAIQELPSTLHRLVGLEELSLREIPSDIGRMSFLTKISLQGGRIVNLPESIVHLSSLKSLNLSDCKSLECIPKLPPCLNELLALNCTSIKKVVPNSWLKLMSDYNDEIDDFYEFRLTNSEELDASSWSYIVNKAWIKIADDGYRSALFCFPGSRVPDWFLHRGQGHSITVKNNDGYVCSENGLIGFALCVVFGGDDTRTRGSRITYKLSLLYDDKSFVFYDDLNWKPEDSCIIRDHTFLWKYQLDRASVGNNLIHAQNFTFEIIGDYFRRSDCQLNIMVNECGIHPLSIAMSHPKYDVFLSFRGEDTRDNFTSHLHAELCRQRIETFIDNRLVRGEEISPALCKAIEESAIYVVILSKHYASSTWCLDELTKILECKERYGREVIPVFYRVDPSNVRHQKKSYADDFVKHLPLGDKVDAWKAALTQVAKLSGWDSQKIRPDSTLVEEIVKDILKKLSPCGLYNHEGKIGIDKHIEQIQNLLHLESSAVHIIGIWGMGGIGKTEIAGAIYEKLATHFNSRGIVKNVQQEIEKYGVDNVKSKYLSHLLDKQDITSSRFKQTKVLLVFDDVKDSDQFIDLIGTCSNFVHGSRIIVTSRDKQVLKNANVDEMYHVVEMNEKDSLQLFCLNAFKQKEPIETYASLTKKVLNYAKGVPLALKVLGLFLQGRAKEAWESELQKLEKNPEPKIFNVLKLSYDGLDDEQKDIFLDIACFCRGETEKCVVQTLDCYGFSTRIGMDVLQDRCLISILEGRVWMHDRIQEMGHEVVRQQSVNNPEKRSRLHKPEDIYNVLKKNKGQGTDAIQSIALDLSKINEVQLHAKTFKKMHNLRMIKFYNSYWFESYSNVTFHTFLNSFPDNLKFLGWVGFPQRSLPQDFCPNNLVALDMHSSDLEQLWKRDQTLPNLKRLNLSCSQKMIGVPDLSLFPNIEEIILSGCVSLKKVYSSNFLHKLNRLCVDGCTSLKSLSIRSNILSRSTGLVALHGCRNLETILITGTTDVVQTYSIVNSYESNFEGGDWIGDMDSDMFSSISELCLLDLSECESLTCLPAELINLKFLTRLCLSDCLKLEELPEIKEIIENLKVLNLEKTAIKELPSSLHRLVGLEELSLRGCKKLKTIPSSIGNLSKLVKLDITYCKSLETFPSSIFKLKLTELDFSGCSMLRIFPEIPSDIGRMSFLTKISLQGSRIVNLPESMVHLSSLKSLNLSDCKSLECIPKLPQNLIQLLAFDCTSIKKVVRNSLLALMSDSNDKMDGSYEFLLTNSEELDAFSWNYIVNKACIKITDNAYLSAVFCFPGSRVPDWFLHRCHGHSITVKNNDEYVCSENRLIGFALCVVLGGEDMDDSRRGSSITYKLSFISDGKPFVFHDDMNWMLGDRFIIRDHTFLWKYELDRATICNKLIHAQSFTFEILGDDYVRPSDYQLNVIVKECAICPLYIRKNQM 2234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi485g00033 2234 Gene3D - 1092 1255 IPR035897 -
Vivi485g00033 2234 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1095 1841 IPR044974 GO:0006952
Vivi485g00033 2234 Gene3D - 1412 1496 IPR042197 -
Vivi485g00033 2234 Gene3D - 333 417 IPR042197 -
Vivi485g00033 2234 Coils Coil 785 805 - -
Vivi485g00033 2234 SUPERFAMILY L domain-like 1817 2024 - -
Vivi485g00033 2234 ProSiteProfiles TIR domain profile. 4 168 IPR000157 GO:0007165
Vivi485g00033 2234 Pfam BspA type Leucine rich repeat region (6 copies) 1721 1805 IPR026906 -
Vivi485g00033 2234 Pfam BspA type Leucine rich repeat region (6 copies) 629 719 IPR026906 -
Vivi485g00033 2234 Gene3D Ribonuclease Inhibitor 731 902 IPR032675 -
Vivi485g00033 2234 Gene3D Ribonuclease Inhibitor 1867 2039 IPR032675 -
Vivi485g00033 2234 Gene3D Ribonuclease Inhibitor 476 712 IPR032675 -
Vivi485g00033 2234 Gene3D - 170 332 IPR027417 -
Vivi485g00033 2234 Gene3D - 1256 1408 IPR027417 -
Vivi485g00033 2234 SUPERFAMILY L domain-like 472 887 - -
Vivi485g00033 2234 PRINTS Disease resistance protein signature 202 217 - -
Vivi485g00033 2234 PRINTS Disease resistance protein signature 851 867 - -
Vivi485g00033 2234 PRINTS Disease resistance protein signature 368 382 - -
Vivi485g00033 2234 PRINTS Disease resistance protein signature 275 289 - -
Vivi485g00033 2234 FunFam Disease resistance protein (TIR-NBS-LRR class) 335 417 - -
Vivi485g00033 2234 ProSiteProfiles TIR domain profile. 1093 1255 IPR000157 GO:0007165
Vivi485g00033 2234 Gene3D Ribonuclease Inhibitor 1573 1866 IPR032675 -
Vivi485g00033 2234 SUPERFAMILY "Winged helix" DNA-binding domain 1483 1588 IPR036390 -
Vivi485g00033 2234 Pfam NB-ARC domain 183 399 IPR002182 GO:0043531
Vivi485g00033 2234 Pfam NB-ARC domain 1270 1480 IPR002182 GO:0043531
Vivi485g00033 2234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1264 1506 IPR027417 -
Vivi485g00033 2234 SUPERFAMILY L domain-like 1602 1866 - -
Vivi485g00033 2234 SMART till_3 1094 1229 IPR000157 GO:0007165
Vivi485g00033 2234 SMART till_3 5 142 IPR000157 GO:0007165
Vivi485g00033 2234 SUPERFAMILY Toll/Interleukin receptor TIR domain 1091 1232 IPR035897 -
Vivi485g00033 2234 Pfam TIR domain 1094 1256 IPR000157 GO:0007165
Vivi485g00033 2234 Pfam TIR domain 5 174 IPR000157 GO:0007165
Vivi485g00033 2234 Pfam C-JID domain 949 1048 IPR045344 -
Vivi485g00033 2234 Pfam C-JID domain 2087 2230 IPR045344 -
Vivi485g00033 2234 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 144 IPR035897 -
Vivi485g00033 2234 FunFam Disease resistance protein (TIR-NBS-LRR class) 2 170 - -
Vivi485g00033 2234 FunFam Disease resistance protein (TIR-NBS-LRR class) 1414 1496 - -
Vivi485g00033 2234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 427 IPR027417 -
Vivi485g00033 2234 Gene3D - 1 169 IPR035897 -
Vivi485g00033 2234 FunFam Disease resistance protein (TIR-NBS-LRR class) 1091 1257 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi485g00033 2 818 WRKY Transcription Factor Family AT4G12020 32.452 5.25e-101 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi485g00033 - - vvo:131632130 4447.11