Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi485g00022 ATGTTAACAGCTATAGATATATACAATGAAGAACTGATGAAAGCACTAGAGCCTTTTATGAAAACTGGCTCTTCTTCATTAGTCTCTGAACAACAATCACACAATTTGAATCCCAATTACCAAACCCAAAGAAGCTCTATTGGTCTCAACCAACTCACTCCATCACAAATCCTTCAAATCCAAACCCAATTCCAAATCACCCAACAACAACAACAACAAAAAAGTACTCTCACTCTCACACAAAAGCCCGTTCCCATGAAGCACTTTGGAACTCCCTCAAAACCGACGAAACTCTATCGTGGAGTTAGACAGCGTCATTGGGGAAAATGGGTAGCTGAAATAAGACTCCCAAAGAACCGTACTCGTCTTTGGCTTGGAACCTTCGATACTGCAGAGGAAGCAGCTTTTGCTTATGATAACGCAGCTTATAAGCTTAGAGGCGAATTCGCACGCCTCAATTTTCCAAACATGTGCCACTATGGAAACTACAATCCTCTCGCTTCCTCGGTTGATTCTAAGCTTCAAGCTATTTGTGAATCCTTAGCGGTTTCTCAGAAACAAGGGAATATTGAAAAGCCATGCATCTCTGTTGAAGATGTAAAGCCGGTTGTTTTTGTTCCTGAACAACAACCGAAGTATGAATTGGTTTTTCACGAGTTTGAGGATTTTAAGGTTGAGAATGAGAAGGCGGTGTTGTTGTCTATGTCTGATGAATGTTCGCCTGGTTTGTCTTCTCCGGAGTCAGGTGTTAGTTTCTTGGATTTTTCGGATTCTTGTCGGTGGGATGAAGTGGAGAATTTTGGGTTGAAGAAGTACCCTTCTGTTGAAATTGATTGGGAAGCATTATGA 849 0.4134 MLTAIDIYNEELMKALEPFMKTGSSSLVSEQQSHNLNPNYQTQRSSIGLNQLTPSQILQIQTQFQITQQQQQQKSTLTLTQKPVPMKHFGTPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAFAYDNAAYKLRGEFARLNFPNMCHYGNYNPLASSVDSKLQAICESLAVSQKQGNIEKPCISVEDVKPVVFVPEQQPKYELVFHEFEDFKVENEKAVLLSMSDECSPGLSSPESGVSFLDFSDSCRWDEVENFGLKKYPSVEIDWEAL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi485g00022 282 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
Vivi485g00022 282 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Vivi485g00022 282 Pfam AP2 domain 99 148 IPR001471 GO:0003700|GO:0006355
Vivi485g00022 282 SUPERFAMILY DNA-binding domain 98 156 IPR016177 GO:0003677
Vivi485g00022 282 CDD AP2 97 156 IPR001471 GO:0003700|GO:0006355
Vivi485g00022 282 FunFam Ethylene-responsive transcription factor 2 97 156 - -
Vivi485g00022 282 ProSiteProfiles AP2/ERF domain profile. 98 155 IPR001471 GO:0003700|GO:0006355
Vivi485g00022 282 SMART rav1_2 98 161 IPR001471 GO:0003700|GO:0006355
Vivi485g00022 282 Gene3D AP2/ERF domain 98 157 IPR036955 GO:0003700|GO:0006355
Vivi485g00022 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 11 282 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi485g00022 2 282 AP2-EREBP Transcription Factor Family AT4G39780 52.189 8.31e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vivi485g00022 AP2 8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi485g00022 K09286 - gmx:100818839 290.041