Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi485g00016 ATGAGAGAAGAGAAGGAAGAACTCGCGATTTGCAATTTTTACCACTTGGTTCTTAGTGCTATCTGCGGCGCTGGTGTGGTTAAGGGTTTTGAGGGGGAAAAATTCTTCAGAGAAAAAAACGGTGATGCTAACTTTGTTGCTCCTGGGTACACAAAAGGATATGGACTTGGTGCTGAGATTATCGGTACCTTTGTTCTTGTCTACACCGTCTTCTCCGCCACTGATGCCAAACGTAGTGCCAGAGACTCTCATGTTCCTATGGTTGGGGAAGGAAGAAAACCAAAGGCAGTGATTGTGGGAGGGAGTATAGGAGGAATATCAATCGCACATGCCCTGATCTTAACTGGTTGGGATGTTCTTGTCCTTGAAAAAACCACCTTACCTCCATCTGGAAGTCCCACTGGTGCAGGTCTTGGACTCAACCCTGTCTCTCAACAAATCATTCAATCTTGGATTTCACAACCTCAACAATTCTTACATAATACCACTTTTCCACTAACTATTGATCAGAACCAAGTAACTGATAGTGAGAAGAAGGTGAATTGGACATTAACAAGAGATGAAAATTTCAACTTTAGAGCATCACATTGGGCTGATCTTCATGGTGTTCTTTATAATGCACTTCCACCACAAGTATTTTTATGGGGTCATCTTCTTCTCTCTTTCCATGTTGCAAATGAAAAAGGGACTTCTGTTATAATAAAGGCTAAAGTTCTTCAAACCGGAGAGATCGTTGAGATTGTTGGAGAATTGCTTGTTGCAGCAGATGGTTGTCTCTCTTTAATCCGCCAAAAATATCTCCCCGATTTTGAACTAAGATATTCAGGCTATTGTGCTTGGAGAGGTGTTCTTGATTTTTCCGAAATTGAGAATTTAGAAACCATCACAGGTATCAGAAAGGCATACCCTGAATTAGGAAAATGCTTGTACTTTGATTTGGCCTCAGGTACACACAGTGTGTTGTATGAACTTCTGAACAAAAAGCTCAATTGGATTTGGTATGTGAATCAGCCTGAGCCCGAAGTAAGGGTATGA 1035 0.4135 MREEKEELAICNFYHLVLSAICGAGVVKGFEGEKFFREKNGDANFVAPGYTKGYGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPMVGEGRKPKAVIVGGSIGGISIAHALILTGWDVLVLEKTTLPPSGSPTGAGLGLNPVSQQIIQSWISQPQQFLHNTTFPLTIDQNQVTDSEKKVNWTLTRDENFNFRASHWADLHGVLYNALPPQVFLWGHLLLSFHVANEKGTSVIIKAKVLQTGEIVEIVGELLVAADGCLSLIRQKYLPDFELRYSGYCAWRGVLDFSEIENLETITGIRKAYPELGKCLYFDLASGTHSVLYELLNKKLNWIWYVNQPEPEVRV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi485g00016 344 Gene3D Glycerol uptake facilitator protein. 10 153 IPR023271 -
Vivi485g00016 344 Pfam Major intrinsic protein 15 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi485g00016 344 Coils Coil 342 344 - -
Vivi485g00016 344 SUPERFAMILY FAD-linked reductases, C-terminal domain 273 341 - -
Vivi485g00016 344 Gene3D - 268 344 - -
Vivi485g00016 344 PANTHER MONOOXYGENASE-LIKE 92 342 - -
Vivi485g00016 344 SUPERFAMILY Aquaporin-like 17 89 IPR023271 -
Vivi485g00016 344 PRINTS Major intrinsic protein family signature 58 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi485g00016 344 PRINTS Major intrinsic protein family signature 8 27 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi485g00016 344 SUPERFAMILY FAD/NAD(P)-binding domain 94 269 IPR036188 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi485g00016 3 88 Major Intrinsic Protein MIP AT1G01620 65.909 1.44e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi485g00016 - - vvo:131632140 683.33