Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi482g00023 ATGTCTTCTCCTCTTTCAGCTGTTCCTAATATCTTAGAGATTGAAACCACAAGAGAAGAGGTGAAACCGTCAAGCAATATTATTGCTTCGAAAAGGATGAGCAACGGAGGAGAAAATAAGGGAATTTGTTTGAGTTGGAAGGATCTATGGGTGACTGTTTCTGGTTCAAACAATGAAAGCAAATCAATTCTTCAAGGTTTAACTGGTTATGCAAAACCAGGTCAGGTTTTGGCTATAATGGGTCCTTCAGGTTCTGGAAAATCTACACTCCTTGATGCTTTAGCAGGGAGATTAAGTTCAAACACAAGACAATCAGGGGAGATTCTAATCAATGGAAACAAACAAGCTTTGGCTTATGGAACCTCGGCATATGTTACACAAGATGATACATTATTAACAACCTTAACTGTCAAAGAAGCAGTATACTATTCAGCTCAGCTTCAGTTACCTGACACAATGTCTAAGCAAGAGAAGAAACAAAGAGCTGATTCTACAATCAGAGAAATGGGTCTGCAAGATGCAATCAATACAAGAATTGGAGGGTGGGGTGTAAAAGGCATAAGTGGGGGTCAGAAAAGAAGAGTTAGCATTTGCATTGAGATCCTAACACATCCTAGTCTTCTTTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCTTCTTACTATGTCATGAAAAGAATTGCTTCCTTAGGGAAAAAAGATGGAGTTCAAAGGACTATTATTGCGTCGATCCATCAACCTAGTTCCGAAGTTTTTCAACTTTTTCATAATCTTTGTCTTTTGTCTTCTGGTAAAACAGTTTACTTCGGACCTGCTTCTACCGCATCTGAGTTTTTTGCTTTGAATGGTTTTCCTTGTCCTCCTCTCCAAAATCCATCTGATCATTTACTTAAAACCATAAACAAGGATTTTGATCAGGATATCGAGATGGATTTCGCAGAGACGAGTAGAACAATTTCCACAGAACAAGCAATTGGCATCCTTGTGACTTCATATACATCGTCCGAAATAAACCAAGAAGTTATAAACGAAGTAGCAGTACTCTCTAAAAAGGACAACAATTCAACATACAAGAAGAAAAAACATGCTGGCTTTCTTAATCAATGCTTAGTTCTTACCAGAAGATCTTTTGTGAACATGTTTCGTGATCTAGGCTATTATTGGTTGCGCCTCGGCATATATATTGCTTTGGCTATAAGTTTGGCCACTGTCTTTAACAATTTGGATAAAAGTTTTGGCTCAATTCAGGATAGAGGTTCATTTCTCATGTTTGTGTTTTCATTCCTAACTTTCATGACCATTGGTGGATTTCCTTCTTATGTAGAGGACATGAAGGTATTTGAACGCGAAAGACTAAATGGACATTATGGTGTTACTGCATATGTAATTGGGAACACACTTTCATCTCTTCCATACTTGTTAATGGTTTCACTGATTCCAGGAGCTATAGCATATTACCCTGCTGGTCTTCAAAAAGGATATCAACATTTTCTATATTTCATTTGTGCTCTATTCTCATGTCTAATGCTAGTAGAGAGTCTTATGATGATAGTTGCAAGCATTGTCCCTCATTTTCTAATGGGAATCATAACCGGCGCCGGAATTCAAGGAATCATGATGTTGGCTGGTGGATTCTTTAGATTGCCAAATGATCTTCCAAACCCATTTTGGAGATATCCTATGTTCTACATTGCATTCCATAGGTATGCTTTTCAAGGATCCTATAAAAATGAGTTTGAGGGACTAAAGTTTGATAGAGATGATGGATCACTCAATTACATTAGTGGTGATGAGATTCTAAGAAGTAAATGGCATGTGGATATGAGTTACTCAAAGTGGGTTGATCTTGGAGTATTGTTGGGTATGATTGTTCTATATAGAGTTTTGTTTTTGATCATTATCAAAACTACTGAGAAGCTTAAACCTTTTGTGCTATCACTCATGGCAGTGTCTCCAAGGAAAACTATACAAGTTTTGGAGAATCCTAGGGCCAGTCCTTTACATGTAGAAGTTGTATAA 2025 0.3753 MSSPLSAVPNILEIETTREEVKPSSNIIASKRMSNGGENKGICLSWKDLWVTVSGSNNESKSILQGLTGYAKPGQVLAIMGPSGSGKSTLLDALAGRLSSNTRQSGEILINGNKQALAYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSKQEKKQRADSTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTHPSLLFLDEPTSGLDSAASYYVMKRIASLGKKDGVQRTIIASIHQPSSEVFQLFHNLCLLSSGKTVYFGPASTASEFFALNGFPCPPLQNPSDHLLKTINKDFDQDIEMDFAETSRTISTEQAIGILVTSYTSSEINQEVINEVAVLSKKDNNSTYKKKKHAGFLNQCLVLTRRSFVNMFRDLGYYWLRLGIYIALAISLATVFNNLDKSFGSIQDRGSFLMFVFSFLTFMTIGGFPSYVEDMKVFERERLNGHYGVTAYVIGNTLSSLPYLLMVSLIPGAIAYYPAGLQKGYQHFLYFICALFSCLMLVESLMMIVASIVPHFLMGIITGAGIQGIMMLAGGFFRLPNDLPNPFWRYPMFYIAFHRYAFQGSYKNEFEGLKFDRDDGSLNYISGDEILRSKWHVDMSYSKWVDLGVLLGMIVLYRVLFLIIIKTTEKLKPFVLSLMAVSPRKTIQVLENPRASPLHVEVV 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi482g00023 674 Pfam ABC-2 type transporter 247 302 IPR043926 GO:0140359
Vivi482g00023 674 ProSitePatterns ABC transporters family signature. 187 201 IPR017871 GO:0005524|GO:0016887
Vivi482g00023 674 SMART AAA_5 73 262 IPR003593 GO:0016887
Vivi482g00023 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 281 IPR027417 -
Vivi482g00023 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 32 652 - -
Vivi482g00023 674 Pfam ABC transporter 65 215 IPR003439 GO:0005524
Vivi482g00023 674 Gene3D - 44 360 IPR027417 -
Vivi482g00023 674 FunFam ABC transporter G family member 11 42 333 - -
Vivi482g00023 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 290 IPR003439 GO:0005524
Vivi482g00023 674 Pfam ABC-2 type transporter 370 581 IPR013525 GO:0016020|GO:0140359
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi482g00023 63 275 Calmodulin-binding Proteins AT2G36910 27.854 9.81e-10 60.1