Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi482g00018 ATGGTGAAATTCCTCGAGCCAAACAAAGTCGTCATCGTCCTCCAAGGACGCTACGCAGGAAAGAAGGTCGTCATCATCAAGAACTTCGACGATGGAACTCGTGAATGTTCTTACGGCCATGCTTTGGTTGCCGGGATCAAGAAGTACCCAAACAAGGTTATAACTCATGAATCGCGCGTGAAGGCCTTTGTCAAGCTGGTTAACTATCAGCATCTGATGCCTACCCGTTACACTTTGGATGTTGATTTGAAGGAGGTGGTTACCAATGATGCGCTTTTGAGTAATCTTCCGATAATCCTAAACCAGACAAGAAGAAGCTCGGAGGAAACACCATCGACTCACCACTATCGGCCATCGATTCACCACCGTCGGCCATCGATTCTCCCTCGTCAGCCATCAATTCCAACGAACACCGTTATGATTGACTAA 429 0.4732 MVKFLEPNKVVIVLQGRYAGKKVVIIKNFDDGTRECSYGHALVAGIKKYPNKVITHESRVKAFVKLVNYQHLMPTRYTLDVDLKEVVTNDALLSNLPIILNQTRRSSEETPSTHHYRPSIHHRRPSILPRQPSIPTNTVMID 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi482g00018 142 CDD KOW_RPL27 7 80 IPR041991 -
Vivi482g00018 142 Pfam Ribosomal L27e protein family 47 92 IPR001141 GO:0003735|GO:0005840|GO:0006412
Vivi482g00018 142 Gene3D - 1 109 IPR038655 -
Vivi482g00018 142 PANTHER 60S RIBOSOMAL PROTEIN L27 1 93 IPR001141 GO:0003735|GO:0005840|GO:0006412
Vivi482g00018 142 SUPERFAMILY Translation proteins SH3-like domain 2 83 IPR008991 -
Vivi482g00018 142 MobiDBLite consensus disorder prediction 104 142 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi482g00018 1 117 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 61.417 3.57e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi482g00018 K02901 - pvy:116114405 149.828