Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi480g00016 ATGGAGGCCATTCAGAGAGAAACACTCGTCTCACTCTCAAATTCTGTGAAAAAGTTATTAGAAAAGATTGTTTCTAATCAGCTGGTCGACACGTTCCGGATCAAGAATGTTAACGCTTCACTTTCGAAAACGGTGAAGGAAACTCTGGTGGATCTTCAAGATGTTCTTTATTATGCTAAGTACAACCTCATCCCCACTCAAGCTAACAACAAATTGCTGGATTTGCTGAGACGTGATGTTCTTCAAGTTTCCAATTTGCTTCACCAAACTAATCTTTTACGGTATGCTACCGTACTTACTGCTAAGCACCTCAAAATTCATTCTCGTTTAACTTTTTTCATTGAGCTGATTAAGTCTAGAACGGTCAATTTAATTCAAATATTACAAGGCTTAAGCAAACAAATTGGTTATGAATCTGCTATTTATGGAAGAGACTCTGATATTCAGAAACTTAAACATCTTTTGTTGTCTAGTGATAGTAAAATAAGAGTGATTTCCATTGTTGGTATGGGAGGGGTTGGTAAAACAGCCCTTGCTAAACACCTTTACAATCTTCCTCAAGTTAACCACAAATTTGAGTCAAGAGTGTGGATAGATTTCTCAACTGATGTTGATGATTTGAGTGTTTTTGAAAACATTCCTCAATCTATTACTTCACAAACAACCATTGATGATACAGCTGATATGAATACCGTTTACCCAAATTTTTTGCTAGTATTGGATGGTGTGTGGGGTGCAACATCTGTCAATTGGACGTTACTTATGGATATCTTTAATCTTGGGGAAACAGGAAGTAGGATCATTGTAACATCAAGAGATGAAAGAGTTGCACTATCCATGCAAACCTTTCTTTCTCTCCACCATATGACACCATTGAAAGTTGAAGATTGCTGCTCTTTACTTGCCCAACATGCATTTGCAGCACATAACTACCACCAACGATCCAATCTAGAAGAAATTGGCAGGAAAATTGCAAGAAAGTGTGATGGTTTACCATTAGCTGCTGTAGCACATGGGGCTCTTCTTCGCATCTGGTCGGACCCGTATGCTTGGAATTATGTTCTAGAAAGTAAAGCTCAGGATATAGCTTATGAGGTGCAAGCTTCTCTCGAATTGAGCTACAATTTTCTTTCTGATCCTTTAAAACGGTGTTTTCAATTTTGTTCAATTTTTCCAAAGAAGTCCATCTTAGAAAAAAAGATGGTAGTTCAGTTGTGGATTGTAGCAGGCTTACTTGAATCATCGTCCACAGATCAGGAAAAAGTTGGAGAAGAATACTTTGATGAACTAGTGTCAAGGTCGCTAATACATCGGCGATCTATTAGTGATGAGGAAGGGAACTTTGGAATGCACAACTTAATCCATGATTTAGCTACAGAGGTTATATCTCCAGAAGTTTCATCTCCACACTGTATCAATATGGACAAATATAACCTAGATTATACGATGCATAATTTCTCATACAATAGAGGGACATACGATTCATATGACAAATTTGATAAATTATACGGATTAGAAGGTTTGCGTACCTTCCTAGCATTCCCATTACAAGAACAACTGCCTCTTTGTTTGCTATCCAACAAGATAGTACATGACTTGCTGCCAAAAATGAAACAATTACGCATGTTGTCTCTGTCAAGCTACAAGAGTATCACCGAGGTTCCCAACTCTATTGGAAATTTGTTATATATGCAATACTTAAATCTTTCTCACACTAATATTGAAAGGCTGCCTTCTGAAACATGCAAGCTTTACCATCTGCAGTTCTTGTTGTTGGCAGGTTGTAAAAGGCTCACTGAATTGCCGGAGGACATGGGAAAATTGATTAATTTGCGCCACCTTGACATTAGTAACACCGCATTGAGGGAGATGCCTGTACAAATAGCCAAACTAGAAAATCTCCACAATTTGTCTGATTTTGTTGTCAGCAAACAGAATGGTGGATTAAATATCGCAGATCTAGGAAAACTTCCCCACCTACATGGAAAACTTTCAATCTCACAGCTACAAAATGTTAATGACCCCTTTGAAGTAGATCGAGCAAATATAAAGATGAAAGAACAAATAGACGAGTTATCTTTGGAATGGGATCTTGGTAGTACTTTTTTAGATTCACAAATTCAAAGTGTTGTACTTGAAAAGTTGCGATCCTCAACGAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAGCTTCCCAAATTGGTTAGGTGATTCTTTATTTAGCAACATGGTGCATTTAAGGATCTCGAATTGTAATGATTGTTTATGGCTTCCACCTCTTGGACAATTGGGTAATTTGAAAGAACTCATTATTGAAGGGATGCAATCAGTGGAGACAATTGGTATTGAGTTCTATGGAAGTGGTGGCTCTTCATTTCAACCATTTCCCTCTTTGCAGATTCTACACTTTGAGAATATGGAAGAGTGGAAGGAATGGGACTTGATTGGAGGTACGACTACAACGTTACCTAATCTAAAAACTTTATCGTTAAGAAAGTGCCCGAAACTGATAGCCGAAAACATAACTGAAAAATTTCCTTTCTTAACTGAACTTGAGTTGAGAGAATGTCCTTTATTGGTGCAATCAATTCCATTATTTGATCATGTATTTGGGCAACTGATGTTCCCTCTGAATTCTCTTCAACAGCTGACCATAGACGGTTTTCCATCTCTTATGTCCTTCCCAAATCTTCAATCTTTTGTCATAGATGAGTTGCCTAGCAGTTTACGGAAACTCTCTGTTGGCTCTGTTGGTGGGATCGTGTGGAATAACGAGCCAACTTGGGAACATCTCACTTCTCTCTTGGAGTTGCGAATCAACGCTGATGATATGGTGAACACGTTGATGGGGCCATTGCTACCTACATCGCTTGTGAAATTGTGCATTTGTGGTCTTAATGATACAAGCATTGATGAGAAGTGGCTTCAGCATCTCACTTCTCTCCAAAACCTTGAGATTATTAACGCTCCCAAACTCAAGTCATTGCCAAAGAAAGGATTTCCTTCCTCACTTTCAGTACTAAGTGTGACTCGCTGTCCATTACTAGAAGCAAGTTTGCGGAAAAAGCGGGAGAAAGAGTGGCGTAAGATTGCTCACATTCCCTCCATAGTTATTAATGACGAATTGATCACATGA 3144 0.3845 MEAIQRETLVSLSNSVKKLLEKIVSNQLVDTFRIKNVNASLSKTVKETLVDLQDVLYYAKYNLIPTQANNKLLDLLRRDVLQVSNLLHQTNLLRYATVLTAKHLKIHSRLTFFIELIKSRTVNLIQILQGLSKQIGYESAIYGRDSDIQKLKHLLLSSDSKIRVISIVGMGGVGKTALAKHLYNLPQVNHKFESRVWIDFSTDVDDLSVFENIPQSITSQTTIDDTADMNTVYPNFLLVLDGVWGATSVNWTLLMDIFNLGETGSRIIVTSRDERVALSMQTFLSLHHMTPLKVEDCCSLLAQHAFAAHNYHQRSNLEEIGRKIARKCDGLPLAAVAHGALLRIWSDPYAWNYVLESKAQDIAYEVQASLELSYNFLSDPLKRCFQFCSIFPKKSILEKKMVVQLWIVAGLLESSSTDQEKVGEEYFDELVSRSLIHRRSISDEEGNFGMHNLIHDLATEVISPEVSSPHCINMDKYNLDYTMHNFSYNRGTYDSYDKFDKLYGLEGLRTFLAFPLQEQLPLCLLSNKIVHDLLPKMKQLRMLSLSSYKSITEVPNSIGNLLYMQYLNLSHTNIERLPSETCKLYHLQFLLLAGCKRLTELPEDMGKLINLRHLDISNTALREMPVQIAKLENLHNLSDFVVSKQNGGLNIADLGKLPHLHGKLSISQLQNVNDPFEVDRANIKMKEQIDELSLEWDLGSTFLDSQIQSVVLEKLRSSTNLKSLTIKGYGGISFPNWLGDSLFSNMVHLRISNCNDCLWLPPLGQLGNLKELIIEGMQSVETIGIEFYGSGGSSFQPFPSLQILHFENMEEWKEWDLIGGTTTTLPNLKTLSLRKCPKLIAENITEKFPFLTELELRECPLLVQSIPLFDHVFGQLMFPLNSLQQLTIDGFPSLMSFPNLQSFVIDELPSSLRKLSVGSVGGIVWNNEPTWEHLTSLLELRINADDMVNTLMGPLLPTSLVKLCICGLNDTSIDEKWLQHLTSLQNLEIINAPKLKSLPKKGFPSSLSVLSVTRCPLLEASLRKKREKEWRKIAHIPSIVINDELIT 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi480g00016 1047 Gene3D - 292 378 IPR042197 -
Vivi480g00016 1047 Gene3D Ribonuclease Inhibitor 871 1025 IPR032675 -
Vivi480g00016 1047 FunFam Probable disease resistance protein At1g63360 374 460 - -
Vivi480g00016 1047 Gene3D - 379 460 IPR036388 -
Vivi480g00016 1047 Gene3D - 123 285 IPR027417 -
Vivi480g00016 1047 PANTHER DISEASE RESISTANCE PROTEIN RP 78 836 IPR044974 GO:0006952
Vivi480g00016 1047 Pfam NB-ARC domain 146 385 IPR002182 GO:0043531
Vivi480g00016 1047 SUPERFAMILY L domain-like 450 891 - -
Vivi480g00016 1047 PRINTS Disease resistance protein signature 164 179 - -
Vivi480g00016 1047 PRINTS Disease resistance protein signature 230 244 - -
Vivi480g00016 1047 PRINTS Disease resistance protein signature 328 342 - -
Vivi480g00016 1047 PRINTS Disease resistance protein signature 823 839 - -
Vivi480g00016 1047 Gene3D Ribonuclease Inhibitor 485 867 IPR032675 -
Vivi480g00016 1047 SUPERFAMILY L domain-like 878 1020 - -
Vivi480g00016 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 388 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi480g00016 532 646 WRKY Transcription Factor Family AT4G12020 35.345 3.16e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi480g00016 - - vvo:131632030 2044.24