Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi480g00005 ATGGAGGCCATTCAGACAGAACTCTCAAATTATGTGAAGGTGTTGTTGGAAAAGATTGTTTCTGTTTTAAGCTTGGACAACTGCGGGTACATGATGAGTAGCAGCGTTTCACTCTTGAAAAAGATGGAGAAAACACTGGTGGATCTTCACGGTGTTCTTTACCATCCTAACAACAAACTCATCCCCACTCAAGCTAACAACAGATCGCTGCGTTTGCTGAGACATCTTGTTTTTCATCTTGCCAGTTTGCTTGACAAAAATGATTTTTTATGGTATGCCAACCATTCTCGTTTATCTTTTTCCATTGCAGCGATTAAGTCTAAAACGGACACTTTAAAACAAATATTACAACTTGCTGATCATGATGAATCTTCTATTTATGGAAGAGACCCTGATGTTGAGAAACTTATACATCTTTTGTTGTCTAGTAGTAGTGATGATGATAGTAAAATTAGAGTGATTTCCATTCTTGGTATGGGAGGGATTGGTAAAACAGCCCTTGCTAAACACCTTTTCAATCATCCTCAAGTTAACCACAAATTTGAGTTCAAATTGTGGGCAGATTTCTCAGATGATGTTGATGATTCCAGTGTTTTTGAAAACATACTTGAATCTATTACTTCAAAAACAACCATTAATGGAGTTTACCCAAAACTTTTGCTGGTATTAGATGGTGTGTGGGATGCAAGATCTGTCAATTGGACATTGCTGATGAATATCTTAAATGCTGGGGTATCAGGAAATAGGGTCATCGTCACAACACGAGATGAAAGAATTGCAATATCCATGCATACCTTTCTTTCTGTCCATTATCTCAGACCCTTGAAAGTTGAAGATTGTTGGGCTTTACTAACCGAACATGCATTTGGAGCACACAACTACCATCAACGATACTATCTAGAAGAAATTAGCGCATCTAACAAAGAAATGCGAGAAAAGATTGGCCGAAAAATTGCAAAAAAGTGTGATGGATTACCATTAGCTGCTGTAGAACATGGGGCTATTCTTGGCATCTCATTGGACCCAGATTTTTGGAATTATGTGCTACAAAGCCACGCTCGCAATACAGCTTATGAGGTGCTAGCTTCTCTCAAATTGAGCTACAATTTTCTCTCTGATCCTTTAAAACAGTGTTTTCAATATTGTTCAATTTTTCCAAAAAAGTCCATCTTAGAAAAAAAGATGGTAGTTCATTTGTGGATTGCAGCAGGCTTACTAGAATCATCCTCCACAAATCAAGAAAAAGTTGGAGAAGAATACTTTGATGAACTAGTGTCAAGGTCGTTGATACATCGGCGATCTATTAGTGACGAGGAAGGAAACTTTGGAATGCACAACTTCATCCATGATTTAGCTAGAGACGTTTCATTTCTAGAGATTTCATCTTCATACTGTATCGATATGGACAAACATAACCTACTTGATTGGATGCAGAATTTCTCATACAACAGAGGGACATATGATTCATATGACAAATTTTATATGTTATATGGAGTAAAAGGATTAAAAGGTCTGCGTACCTTTCTAGCATTCCCATTACAAGAACAATTGCCTCTTTCTTTGCTATCAAACAAGGTACTATATGACTTGCTGCCAAAAATGAAACAATTACGCATGTTGTCTCTGTCAAGCTACAAGAGTATTACCAAAGTTCCCAACTCTATTGGAAATTTGTTCTCCATGAAGTACTTAAATCTTTCTCAGACTAATATTGAAAGGTTGCCTTCTGAAATATGCGAGCTTTACCATCTGCAGTTCTTGTTGTTGGCAGGCTGTAAAAGGCTCACTGAATTACCGGAGGACATGGGAAAATTGATTAGTTTGCGCTACCTTGACGTTAGTAACACCGCATTGAGGGAAATGCCCGTACAATTAGCCAAACTAGAAAATCTCCACACTTTGTCTGACTTTGTTGTCAGCAAACATAATGGTGGATTGAATATTGCGGAGCTAGGAAAACTTCCCCACCTACATGGAAAACTTTCAATCTCACAGCTACAGAATGTTAATGACCCCTTTGAAGTAGATCGAGCCAATATAAAGATGAAAGAACAAATAGACGAGTTAGCTTTGGAATGGGATCTTGATAGTACTTTTTTAGATTCACAAATTCAAAGTGTTGTACTTGAAAAGTTGCGACCCTCAACAAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAACTTCCCCAATTGGTTAGGTGATTCTTTATTTAGCAACATGGTGCATTTAAGGATCTCGAATTGTAATGATTGTTTAGGGCTTCCATCCCTTGGAAAATTGGGTAATCTGAAAGAACTCGTTATTGAAGGGATGCAATCAGTGGAGACAATTGGTATTGAGTTCTATGGAAGTGGTGATTCTTCATTTCAACCATTTCCCTCTTTGGAGAGTCTACACTTTGAGAATATGCAAGAGTGGAAGGAATGGGACTTGATTGGAGATACGGCTACAACGTTTCCTAATCTAAAAACTTTATCGCTAAGAAAGTGCTCGAAACTGATTGCTGGAAACATAATTGAAAAATTTCCTTTCTTAACTGAACTTGAGTTAAAAGAATGTCCTTTACTGGTACAATCAATGCCATTATCTGATCATGTATTCAGGCAACTGATGTTCCCTTTGAATCTTCTTCAACAGCTGACCATAGACGGCATTCCATCTTCAATGTCTTTTCCAACAAATGGTCTACCAAAAACCTTGAAATTTCTGATAATCAGTAACTGTGAAAATCTAGAGTTCCTTCCTCGTGAATACTTGTCCAATTACACATCGCTTGAAGAATTGAAAATATCTTATAGCTGCAATTCAATGACATCATTTACCTTGGGTGCTCTCCCTGTCCTCAAGAGTTTGTTTATTGAGGGTTGTAACAATCTGAAATCAATATCAATTGCAGAAGATGTGTCACTAAAGAGTCTCTCATTTCTTAGAAGCATCAAAATATGGGATTGTAGTGAATTGGAGTCATTTACCCTAGGTGGATTGGCCACTCCAAATCTTCTCTATATTGCAATGTGGAAGTGTGAGAAGCTTCATTCACTACCAGAAGCAATGAACAGTCTAGCCGGCCTTCGAGAAATGGAAATTGATAATCTACCAAACCTTCAATCTTTAGTCATAGATGAGTTGCCTAGTAGTTTACAAAAACTGTCTGTTGGCTATGTTGGTGGGATTATGTGGAATACTGAGCCAAGTTGGGAACATCTCACTTGTCTTTCAGTGTTGCGAATTAACGGTGATGATACGGTGAACATGTTGATGGGGCCACTGCTACCTACATCGCTTGTGAAATTGTGCATTTGTGGTCTTAATGATACAAGCATTGATGAGAAGTGGCTTCAGCATCTCACTTCTCTTCAAAACCTTGAGATTATTAACGCTCCCAAACTCAAGTCGTTGCCAAAGAAAGGATTTCCTTCCTCACTTTCAGTACTAAGTGTGACTCGCTGTCCATTACTAGAAGCAAGTTTGTGGAAAAAGCGGGGGAAAGAGTGGCGTAAGATTGCTCACATTCCCTCCATAGTTATTAATGACGAATTGATCACATGA 3558 0.3814 MEAIQTELSNYVKVLLEKIVSVLSLDNCGYMMSSSVSLLKKMEKTLVDLHGVLYHPNNKLIPTQANNRSLRLLRHLVFHLASLLDKNDFLWYANHSRLSFSIAAIKSKTDTLKQILQLADHDESSIYGRDPDVEKLIHLLLSSSSDDDSKIRVISILGMGGIGKTALAKHLFNHPQVNHKFEFKLWADFSDDVDDSSVFENILESITSKTTINGVYPKLLLVLDGVWDARSVNWTLLMNILNAGVSGNRVIVTTRDERIAISMHTFLSVHYLRPLKVEDCWALLTEHAFGAHNYHQRYYLEEISASNKEMREKIGRKIAKKCDGLPLAAVEHGAILGISLDPDFWNYVLQSHARNTAYEVLASLKLSYNFLSDPLKQCFQYCSIFPKKSILEKKMVVHLWIAAGLLESSSTNQEKVGEEYFDELVSRSLIHRRSISDEEGNFGMHNFIHDLARDVSFLEISSSYCIDMDKHNLLDWMQNFSYNRGTYDSYDKFYMLYGVKGLKGLRTFLAFPLQEQLPLSLLSNKVLYDLLPKMKQLRMLSLSSYKSITKVPNSIGNLFSMKYLNLSQTNIERLPSEICELYHLQFLLLAGCKRLTELPEDMGKLISLRYLDVSNTALREMPVQLAKLENLHTLSDFVVSKHNGGLNIAELGKLPHLHGKLSISQLQNVNDPFEVDRANIKMKEQIDELALEWDLDSTFLDSQIQSVVLEKLRPSTNLKSLTIKGYGGINFPNWLGDSLFSNMVHLRISNCNDCLGLPSLGKLGNLKELVIEGMQSVETIGIEFYGSGDSSFQPFPSLESLHFENMQEWKEWDLIGDTATTFPNLKTLSLRKCSKLIAGNIIEKFPFLTELELKECPLLVQSMPLSDHVFRQLMFPLNLLQQLTIDGIPSSMSFPTNGLPKTLKFLIISNCENLEFLPREYLSNYTSLEELKISYSCNSMTSFTLGALPVLKSLFIEGCNNLKSISIAEDVSLKSLSFLRSIKIWDCSELESFTLGGLATPNLLYIAMWKCEKLHSLPEAMNSLAGLREMEIDNLPNLQSLVIDELPSSLQKLSVGYVGGIMWNTEPSWEHLTCLSVLRINGDDTVNMLMGPLLPTSLVKLCICGLNDTSIDEKWLQHLTSLQNLEIINAPKLKSLPKKGFPSSLSVLSVTRCPLLEASLWKKRGKEWRKIAHIPSIVINDELIT 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi480g00005 1185 PANTHER DISEASE RESISTANCE PROTEIN RP 112 854 IPR044974 GO:0006952
Vivi480g00005 1185 Gene3D - 368 455 IPR036388 -
Vivi480g00005 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 382 IPR027417 -
Vivi480g00005 1185 Gene3D - 275 367 IPR042197 -
Vivi480g00005 1185 Pfam NB-ARC domain 132 378 IPR002182 GO:0043531
Vivi480g00005 1185 PRINTS Disease resistance protein signature 322 336 - -
Vivi480g00005 1185 PRINTS Disease resistance protein signature 213 227 - -
Vivi480g00005 1185 PRINTS Disease resistance protein signature 820 836 - -
Vivi480g00005 1185 PRINTS Disease resistance protein signature 153 168 - -
Vivi480g00005 1185 Gene3D - 109 268 IPR027417 -
Vivi480g00005 1185 Gene3D Ribonuclease Inhibitor 872 1176 IPR032675 -
Vivi480g00005 1185 FunFam Probable disease resistance protein At1g63360 368 454 - -
Vivi480g00005 1185 SUPERFAMILY L domain-like 877 1157 - -
Vivi480g00005 1185 Gene3D Ribonuclease Inhibitor 510 866 IPR032675 -
Vivi480g00005 1185 SUPERFAMILY L domain-like 445 889 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi480g00005 529 643 WRKY Transcription Factor Family AT4G12020 33.621 3.72e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi480g00005 - - vvo:131632024 1656.73