Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi480g00003 ATGGAGGCCATTCAGACAGAACTCTCAAATTATGTGAAGGTGTTGTTAGAAAAGATTGTTTCTGTTTTAAGCTTGGACAACTGCGGGTACATGATGAGTAGCAGCGTTTCACTCTTGAAAAAGATGGAGAAAACACTGGTGGATCTTCACGGTGTTCTTTACCATCCTAACAACAAACTCATCCCCACTCAAGCTAACAACAGATCGCTGCGTTTGCTGAGACATCTTGTTTTTCATCTTGCCAGTTTGCTTGACAAAAATGATTTTTTATGGTATGCCAACCATTCTCGTTTATCTTTTTCCATTGCAGCGATTAAGTCTAAAACGGACACTTTAAAACAAATATTACAACTTGCTGATCATGATGAATCTTCTATTTATGGAAGAGACCCTGATGTTGAGAAACTTATACATCTTTTGTTGTCTAGTAGTAGTGATGATGATAGTAAAATTAGAGTGATTTCCATTCTTGGTATGGGAGGGATTGGTAAAACAGCCCTTGCTAAACACCTTTTCAATCATCCTCAAGTTAACCACAAATTTGAGTTCAAATTGTGGGCAGATTTCTCAGATGATGTTGATGATTCCAGTGTTTTTGAAAACATACTTGAATCTATTACTTCAAAAACAACCATTAATGGAGTTTACCCAAAACTTTTGCTGGTATTAGATGGTGTGTGGGATGCAAGATCTGTCAATTGGACATTGCTGATGAATATCTTAAATGCTGGGGTATCAGGAAATAGGGTCATCGTCACAACACGAGATGAAAGAATTGCAATATCCATGCATACCTTTCTTTCTGTCCATTATCTCAGACCCTTGAAAGTTGAAGATTGTTGGGCTTTACTAACCGAACATGCATTTGGAGCACACAACTACCATCAACGATACTATCTAGAAGAAATTAGCGCATCTAACAAAGAAATGCGAGAAAAGATTGGCCGAAAAATTGCAAAAAAGTGTGATGGATTACCATTAGCTGCTGTAGAACATGGGGCTATTCTTGGCATCTCATTGGACCCAGATTTTTGGAATTATGTGCTACAAAGCCACGCTCGCAATACAGCTTATGAGGTGCTAGCTTCTCTCAAATTGAGCTACAATTTTCTCTCTGATCCTTTAAAACAGTGTTTTCAATATTGTTCAATTTTTCCCAAAAAGTCCATCTTAGAAAAAAAGATGGTAGTTCATTTGTGGATTGCAGCCGGCTTACTAGAATCATCCTCCACAAATCAAGAAAAAGTTGGAGAAGAATACTTTGATGAACTAGTGTCAAGGTCGTTGATACATCGGCGATCTATTAGTGACGAGGAAGGAAACTTTGGAATGCACAACTTCATCCATGATTTAGCTAGAGACGTTTCATTTCTAGAGATTTCATCTTCATACTGTATCGATATGGACAAACATAACCTACTTGATTGGATGCAGAATTTCTCATACAACAGAGGGACATATGATTCATATGACAAATTTTATATGTTATATGGAGTAAAAGGATTAAAAGGTCTGCGTACCTTTCTAGCATTCCCATTACAAGAACAATTGCCTCTTTCTTTGCTATCAAACAAGGTACTATATGACTTGCTGCCAAAAATGAAACAATTACGCATGTTGTCTCTGTCAAGCTACAAGAGTATTACCAAAGTTCCCAACTCTATTGGAAATTTGTTCTACATGAAGTACTTAAATCTTTCTCAGACTAATATTGAAAGGTTGCCTTCTGAAATATGCGAGCTTTACCATCTGCAGTTCTTGTTGTTGGCAGGCTGTAAAAGGCTCACTGAATTACCGGAGGACATGGGAAAATTGATTAGTTTGCGCTACCTTGACGTTAGTAACACCGCATTGAGGGAAATGCCCGTACAATTAGCCAAACTAGAAAATCTCCACACTTTGTCTGACTTTGTTGTCAGCAAACATAATGGTGGATTGAATATTGCGGAGCTAGGAAAATTTCCCCACCTACATGGAAAACTTTCAATCTCACAGCTACAGAATGTTAATGACCCCTTTGAAGTAGATCGAGCCAATATAAAGATGAAAGAACAAATAGACGAGTTAGCTTTGGAATGGGATCTTGATAGTACTTTTTTAGATTCACAAATTCAAAGTGTTGTACTTGAAAAGTTGCGACCCTCAACAAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAACTTCCCCAATTGGTTAGGTGATTCTTTATTTAGCAACATGGTGCATTTAAGGATCTCGAATTGTAATGATTGTTTAGGGCTTCCATCCCTTGGAAAATTGGGTAATCTGAAAGAACTCGTTATTGAAGGGATGCAATCAGTGGAGACAATTGGTATTGAGTTCTATGGAAGTGGTGATTCTTCATTTCAACCATTTCCCTCTTTGGAGAGTCTACACTTTGAGAATATGCAAGAGTGGAAGGAATGGGACTTGATTGGAGATACGGCTACAACGTTTCCTAATCTAAAAACTTTATCGCTAAGAAAGTGCCCGAAACTGATTGCTGGAAACATAACTGAAAAATTTCCTTTCTTAACTGAACTTGAGTTAAAAGAATGTCCTTTACTGGTACAATCAATGCCATTATCTGATCATGTATTCAGGCAACTGATGTTCCCTTTGAATCTTCTTCAACAGCTGACCATAGACGGCATTCCATCTTCAATGTCTTTTCCAACAAATGGTCTACCAAAAACCTTGAAATTTCTGATAATCAGTAACTGTGAAAATCTAGAGTTCCTTCCTCGTGAATACTTGTCCAATTACACATCGCTTGAAGAATTGAAAATATCTTATAGCTGCAATTCAATGACATCATTTACCTTGGGTGCTCTCCCTGTCCTCAAGAGTCTGTTTATTGAGGGTTGTAACAATCTGAAATCAATATCAATTGCAGAAGATGTGTCACTAAAGAGTCTCTCATTTCTTAGAAGCATCAAAATATGGGATTGTAATGAATTGGAGTCATTTACCCTAGGTGGATTGGCCACTCCAAATCTTCTCTATATTGCAATGTGGAAGTGTGAGAAGCTTCATTCACTACCAGAAGCAATGAACAGTCTAGCCGGCCTTCGAGAAATGGAAATTGATAATCTACCAAACCTTCAATCTTTAGTCATAGATGAGTTGCCTAGTAGTTTACAAAAACTGTCTGTTGGCTATGTTGGTGGGATTATGTGGAATACTGAGCCAAGTTGGGAACATCTCACTTGTCTTTCAGTGTTGCGAATTAACGGTGATGATACGGTGAACATGTTGATGGGGCCACTGCTACCTACATCGCTTGTGAAATTGTGCATTTGTGGTCTTAATGATACAAGCATTGATGAGAAGTGGCTTCAGCATCTCACTTCTCTTCAAAACCTTGAGATTATTAACGCTCCCAAACTCAAGTCGTTGCCAAAGAAAGGATTTCCTTCCTCACTTTCAGTACTAAGTGTGACTCGCTGTCCATTACTAGAAGCAAGTTTGTGGAAAAAGCGGGGGAAAGAGTGGCGTAAGATTGCTCACATTCCCTCCATAGTTATTAATGACGAATTGATCACATGA 3558 0.3817 MEAIQTELSNYVKVLLEKIVSVLSLDNCGYMMSSSVSLLKKMEKTLVDLHGVLYHPNNKLIPTQANNRSLRLLRHLVFHLASLLDKNDFLWYANHSRLSFSIAAIKSKTDTLKQILQLADHDESSIYGRDPDVEKLIHLLLSSSSDDDSKIRVISILGMGGIGKTALAKHLFNHPQVNHKFEFKLWADFSDDVDDSSVFENILESITSKTTINGVYPKLLLVLDGVWDARSVNWTLLMNILNAGVSGNRVIVTTRDERIAISMHTFLSVHYLRPLKVEDCWALLTEHAFGAHNYHQRYYLEEISASNKEMREKIGRKIAKKCDGLPLAAVEHGAILGISLDPDFWNYVLQSHARNTAYEVLASLKLSYNFLSDPLKQCFQYCSIFPKKSILEKKMVVHLWIAAGLLESSSTNQEKVGEEYFDELVSRSLIHRRSISDEEGNFGMHNFIHDLARDVSFLEISSSYCIDMDKHNLLDWMQNFSYNRGTYDSYDKFYMLYGVKGLKGLRTFLAFPLQEQLPLSLLSNKVLYDLLPKMKQLRMLSLSSYKSITKVPNSIGNLFYMKYLNLSQTNIERLPSEICELYHLQFLLLAGCKRLTELPEDMGKLISLRYLDVSNTALREMPVQLAKLENLHTLSDFVVSKHNGGLNIAELGKFPHLHGKLSISQLQNVNDPFEVDRANIKMKEQIDELALEWDLDSTFLDSQIQSVVLEKLRPSTNLKSLTIKGYGGINFPNWLGDSLFSNMVHLRISNCNDCLGLPSLGKLGNLKELVIEGMQSVETIGIEFYGSGDSSFQPFPSLESLHFENMQEWKEWDLIGDTATTFPNLKTLSLRKCPKLIAGNITEKFPFLTELELKECPLLVQSMPLSDHVFRQLMFPLNLLQQLTIDGIPSSMSFPTNGLPKTLKFLIISNCENLEFLPREYLSNYTSLEELKISYSCNSMTSFTLGALPVLKSLFIEGCNNLKSISIAEDVSLKSLSFLRSIKIWDCNELESFTLGGLATPNLLYIAMWKCEKLHSLPEAMNSLAGLREMEIDNLPNLQSLVIDELPSSLQKLSVGYVGGIMWNTEPSWEHLTCLSVLRINGDDTVNMLMGPLLPTSLVKLCICGLNDTSIDEKWLQHLTSLQNLEIINAPKLKSLPKKGFPSSLSVLSVTRCPLLEASLWKKRGKEWRKIAHIPSIVINDELIT 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi480g00003 1185 PRINTS Disease resistance protein signature 322 336 - -
Vivi480g00003 1185 PRINTS Disease resistance protein signature 213 227 - -
Vivi480g00003 1185 PRINTS Disease resistance protein signature 153 168 - -
Vivi480g00003 1185 PRINTS Disease resistance protein signature 820 836 - -
Vivi480g00003 1185 SUPERFAMILY L domain-like 877 1157 - -
Vivi480g00003 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 382 IPR027417 -
Vivi480g00003 1185 Gene3D - 275 367 IPR042197 -
Vivi480g00003 1185 PANTHER DISEASE RESISTANCE PROTEIN RP 110 833 IPR044974 GO:0006952
Vivi480g00003 1185 Pfam NB-ARC domain 132 378 IPR002182 GO:0043531
Vivi480g00003 1185 Gene3D - 368 455 IPR036388 -
Vivi480g00003 1185 SUPERFAMILY L domain-like 445 890 - -
Vivi480g00003 1185 Gene3D - 109 268 IPR027417 -
Vivi480g00003 1185 Gene3D Ribonuclease Inhibitor 898 1058 IPR032675 -
Vivi480g00003 1185 Gene3D Ribonuclease Inhibitor 510 875 IPR032675 -
Vivi480g00003 1185 FunFam Probable disease resistance protein At1g63360 368 454 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi480g00003 529 643 WRKY Transcription Factor Family AT4G12020 33.621 1.93e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi480g00003 - - vvo:131632024 1669.83