Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi478g00004 ATGATGAATTCACTTTGTGGAAGCTCAAATTCCATCAAAGAAAAATGTGTTCAACCAACTTCTTCAAAGAAAAATGTCACAAATTCTTGTGATGACTTAGATCAAATTAGTAGCATTCTAACCCCACAAAGCTTAAACCTACCCTCACTCAAATTTGACTTAGATGGTGATGTGGAAGTCCAATCGCCAGATAGTTCAATGTGGGAATCATTTTTCAATGACCATTTAGATAATGATTTCATGATATCATCACCAATTAGGAACAACAACATTAACCCTAATTCACCACAAGCTTCTACTTACAATAATTCTAACTATAATAATAGTAGTAACTATGTTCAAGGCATGCACATTCAAACCTTTTCACCACCTCGTTTAAGTAGTTATAATAATCAACAAAAAGGAAAAGGACTTAGTCCACTTCATAGAGTTTTCAACTCACCAAACAATCAATACATGCAACATGTTGAAAATCTTTCTTTGCCAGCAATTGAAGAGTTCTTAGAAGATTTTCAAGTTGATGTTGATTTTCCATCAACAAAGGCTATTTCTTCTTCTAATGATCAATGTTTTGACATGGAGACACCGATTTCGACGATTTTGGATAGTTTAACAATGCAGAATTCTTCATCAAGGTATGAGGAATCCTCAGTTATGCATGGTGGTGGTGGAAGCTCTTCTCAAGTGTCTCAAGAGAGTGATATGTATCATCAAATGGGATCTATGGCTAGTGCTTCACTTTCACAAGCTTTACAACAAGAAAGGTATCAAGAGAAACACCAAAAGTTGCAAGCACAACAACAAAGTCTAACAGTTCCTATTCCAATTGGAATTGAACAGGAGCAAGACAGTGGACTTCAACTGGTGCACTTGCTTCTAGCTTGTGCTGAAGCAGTTGCAAAAGAAGAATACATGCTAGCAAGAAGGTACCTACACCAGCTCAACAGAGTAGTAACACCACTAGGTGACTCCATGCAACGTGTAGCTTCATGTTTCACAGAATCTCTGAGTGCAAGACTAGCTGCAACCCTAACAACAAAGTCATCATCAATGAAAAAAATAACACCGCCATCATCTTCATCATCATCCTCATCATCAAGTTTCTCTACCTTTCCATCAAACGCCATGGAAGTCCTTAGGATCTACCAGATTGTGTATCAAGCTTGTCCTTACATAAAGTTCGCTCACTTCACCGCTAACCAAGCGATTTTTGAGGCGTTCGAGGCTGAGGAGCGTGTCCATGTCATCGACCTTGATATCCTCCAGGGTTACCAATGGCCTGCATTCATGCAGGCATTGGCTGCACGGCCCGGCGGTGCTCCGTTTCTCAGGATCACAGGTGTCGGGCCGTGCATTGAATCGGTTAGAGAAACTGGACGATGCTTAACCGAGTTAGCTCATTCTCTTCGTATCCCGTTTGAGTTCCACCCTGTTGGAGAACAACTTGAGGATCTTAAACCACACATGTTTAACCGCCGTGTAGGCGAGGCTTTAGCGGTTAACACAGTTAACCGCCTCCATCGTGTTCCCGGGAACCATCTCGGGAACCTGCTATCTATGATTAGAGACCAAGCGCCTAACATCGTGACGCTAGTCGAACAAGAAGCAAGCCATAACGGGCCATACTTTCTAGGCCGGTTTCTCGAGGCCTTGCATTACTACTCAGCGATCTTCGACTCCTTGGACGCGACATTTCCAATGGAGTCAGCACCTAGGGCAAAGGTGGAGCAGTATATCTTTGCACCCGAGATTCGGAACATCGTGGCATGCGAAGGCGAGGAGAGGATAGAGAGACATGAGAGGTTGGAAAAATGGAGGAAGATAATGGAAGGGAAAGGGTTCAAAGGAGTAGCATTGAGTCCGAATGCGGTGACGCAATCGAGAATATTGTTGGGTTTGTATTCATGTGATGGGTATAGGTTAACTGAGGACAAGGGTTGCTTGTTGCTTGGGTGGCAAGATAGATCCATCATTGCTGCTTCTGCATGGCGCTGCTGA 1998 0.4279 MMNSLCGSSNSIKEKCVQPTSSKKNVTNSCDDLDQISSILTPQSLNLPSLKFDLDGDVEVQSPDSSMWESFFNDHLDNDFMISSPIRNNNINPNSPQASTYNNSNYNNSSNYVQGMHIQTFSPPRLSSYNNQQKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDFQVDVDFPSTKAISSSNDQCFDMETPISTILDSLTMQNSSSRYEESSVMHGGGGSSSQVSQESDMYHQMGSMASASLSQALQQERYQEKHQKLQAQQQSLTVPIPIGIEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHQLNRVVTPLGDSMQRVASCFTESLSARLAATLTTKSSSMKKITPPSSSSSSSSSSFSTFPSNAMEVLRIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNTVNRLHRVPGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPMESAPRAKVEQYIFAPEIRNIVACEGEERIERHERLEKWRKIMEGKGFKGVALSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRSIIAASAWRC 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi478g00004 665 ProSiteProfiles GRAS family profile. 279 664 IPR005202 -
Vivi478g00004 665 MobiDBLite consensus disorder prediction 211 233 - -
Vivi478g00004 665 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 233 659 IPR005202 -
Vivi478g00004 665 Pfam GRAS domain family 288 664 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi478g00004 282 665 GRAS Transcription Factor Family AT1G66350 44.359 1.27e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi478g00004 GRAS 7.3e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi478g00004 - - gmx:100805039 908.286