Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi476g00006 ATGGCTTCTTCCATGAGGATCTCAAGGTTCATCTCTAGATCAGTTTCTTCTTCTTCATTGTTCTCTCGAGGTTTGAGTGCTAGAGTCTCTAAATACAGCACCGATGCTTCTTCCATCGAAGAACCGATCAAACCTACGTTTCAAGTTGATCATACTCAGCTTTTAATTGATGGAAAATTTGTAGATTCTGCTTCTGGTAAAACATTTCCAACGTTGGATCCAAGAACAGGCCAAGTGATTGCTCATGTTTCTGAAGGTCAACATGAAGATGTTGATCGCGCTGTTGCGGCTGCTCGCAAAGCATTTGATCATGGACCATGGCCTAAGATGACAGCCTATGAAAGGCAAAGGATATTGTTACGGGCTGCGGATTTGCTTGAAAAGCATAATCATGAGCTTGCAACACTTGAGACTTGGGATAATGGGAAGCCATATGAACAGTCTGCGGAAATTGAAGTTCCAATGCTGACACGCTTAATTCGGTATTATGCTGGTTGGGCAGACAAGATTCATGGTCTCACAGTTCCAGCTGATGGGCCACATCAGGTGCATACATTGCATGAACCAATTGGTGTTGCTGGTCAGATCATTCCATGGAATTTTCCTCTTCTCATGTTTGGTTGGAAGGTTGGACCGGCATTGGCATGTGGCAACACTATTGTTCTAAAAACATCTGAGCAGACACCACTGTCTGCTTTGTATGCAGCAAAACTATTTCATGAGGCTGGACTTCCTCCAGGTGTTTTGAATATAGTATCTGGCTTTGGTCCAACAGCGGGTGCCGCTATTGCTAGTCATATGGATGTGGATAAGATCGCTTTTACAGGTTCAACTGTTACTGGAAAAATCATCCTTGAACTAGCTGCTAAAAGCAATTTGAAGGCCGCAACTTTGGAGCTTGGTGGAAAGTCTCCCTTTATTGTATGTGAAGATGCTGATGTAGATCAGGCTGTCGAGTTAGCACACTTCGCCTTGTTCTTCAACCAGGGACAATGTTGCTGTGCTGGCTCTCGAACGTTTGTACATGAAAGTGTGTATGATGAGTTTGTTGCGAAAGCAAAGGCCCGCGCTTTGAAACGCGTTGTTGGAGATCCATTCAAGGCTGGAGTAGAACAAGGTCCTCAGATTGATTCAAAACAATTCGAGAAAATACTCAAGTATATTAACTCCGGTGTTGAAAATGGCGCTACACTGGAAACTGGAGGAGAAAAGATTGGCAACAAGGGCTTCTATATACAACCAACTGTCTTCTCAAACGTTCAGGACGAAATGCTGATTGCAAAGGATGAGATTTTCGGTCCTGTGCAAACCATATTGAAATTCAAGGACATTGATGAGGTGATTCAAAGAGCAAATAACACGCGTTTTGGCCTTGCGGCAGGGGTCTTCACGAAGAACATAGACACTGCTAATACTTTGACAAGAGCATTGAGAGTTGGATCAGTTTGGGTGAATTGCTATGATGTATTTGATGCTACAATTCCTTTTGGTGGGTATAAGATGAGTGGACAAGGCAGAGAAAAAGGAGAGTATAGTCTTAAGAACTACTTGCAAGTGAAAGCAGTTGTTACTCCCTTGAAGAATCCAGCATGGCTTTGA 1599 0.4321 MASSMRISRFISRSVSSSSLFSRGLSARVSKYSTDASSIEEPIKPTFQVDHTQLLIDGKFVDSASGKTFPTLDPRTGQVIAHVSEGQHEDVDRAVAAARKAFDHGPWPKMTAYERQRILLRAADLLEKHNHELATLETWDNGKPYEQSAEIEVPMLTRLIRYYAGWADKIHGLTVPADGPHQVHTLHEPIGVAGQIIPWNFPLLMFGWKVGPALACGNTIVLKTSEQTPLSALYAAKLFHEAGLPPGVLNIVSGFGPTAGAAIASHMDVDKIAFTGSTVTGKIILELAAKSNLKAATLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFVAKAKARALKRVVGDPFKAGVEQGPQIDSKQFEKILKYINSGVENGATLETGGEKIGNKGFYIQPTVFSNVQDEMLIAKDEIFGPVQTILKFKDIDEVIQRANNTRFGLAAGVFTKNIDTANTLTRALRVGSVWVNCYDVFDATIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi476g00006 532 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 298 305 IPR029510 GO:0016491
Vivi476g00006 532 FunFam Aldehyde dehydrogenase, putative 494 520 - -
Vivi476g00006 532 Pfam Aldehyde dehydrogenase family 60 522 IPR015590 GO:0016491
Vivi476g00006 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 522 IPR016162 GO:0016491
Vivi476g00006 532 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491
Vivi476g00006 532 FunFam Mitochondrial aldehyde dehydrogenase 2 304 493 - -
Vivi476g00006 532 CDD ALDH_F2BC 49 524 - -
Vivi476g00006 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 493 IPR016163 GO:0016620
Vivi476g00006 532 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 34 522 - -
Vivi476g00006 532 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 56 314 - -
Vivi476g00006 532 SUPERFAMILY ALDH-like 48 526 IPR016161 GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi476g00006 3 532 Aldehyde Dehydrogenase Gene Family AT3G48000 75.791 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi476g00006 K00128 - gmx:100777399 909.442