Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi474g00030 ATGGGATCTAACTATGAAGATATTCATGATCTTCCAATATGTTCACCCCTTGAAGCAATGAATGATGATGATGATGATGATGACGATGATGCATGTCTCTCTGCTATGCTTCTTTGTTGTGGTCCAATGATTTTCACTTCAGTATTGAAAGCTTCAATCGAGCTAAACTTGTTTGAGATCATTTATAAGGCAAATCCACCATGTGTTTCAGCATCTTATGTTGCTTCACAGCTACAACAAACAACACAACATCCTCAACTTCCTCGAAGACTTGACCGAATGTTGTGTCTTCTTGCAAGCCATGGTCTTCTTGTTTGTTCCACAAGGACAAATGATGAAGGTGGGAGTGAAAGAGTTTATGAATTGTCTTTGGCTGGTAAATACTTTGTCAATGATGAGAAGAATGGTTCTGTTGCTTTGTTCTCAACATTCATGAATCACCCGAAATTGATCGATGCATTCACCAATGTTAAGGAGGTACTGTCAGATTGTAATAAAGGACTATACATGAAAGTTCATGGAATGGCTGTTTATGAAGGAATACAATCTGATCCAGCTTGGAATCATGTGTTTAATAGAGCAATGGGGGATATTTGCACTATAGAAATGAAGAAGATATTGGAAAAATACAAAGGGTTTGAAGGAATATCATTGTTGGTTGATGTTGGAGGAGGAATTGGGCAAAGTTTGAATATGATTATATCTAAGTATCCTTCTATAAAAGGCATTAATTTTGATTTGCCTCAAGTAATACAACATGCTCCATTTTATCAAGGGATTGAACATGTTGAAGGAGACATGTTTAATGGTGTCCCAAAAGGTGATGTCATATTATTGAAGGCTATACTACACAACTGGTCTGATGAAAACTGTCTCAAAGTTCTAAGTAAGTGCTACAATGCTTTGCCACAACATGGTAAAGTGATTGTTGTGGACTTCATAATGCCTCAAGAAATTCAGCATACAAAAGCAGATAAAATGATTACTAGCTTTGATAATCTCATGTTTCTAGATGGTGGTGTTGAAAGAACAGAGAAAGAATTTGAAAAGCTATGCAAATTCTCTGGCTTTTCTAGTTTTCATGTTGTTTGTCTTGCTTTCTCTGCCCTAGGAGTGATGGAATTTTATAAATAA 1134 0.3616 MGSNYEDIHDLPICSPLEAMNDDDDDDDDDACLSAMLLCCGPMIFTSVLKASIELNLFEIIYKANPPCVSASYVASQLQQTTQHPQLPRRLDRMLCLLASHGLLVCSTRTNDEGGSERVYELSLAGKYFVNDEKNGSVALFSTFMNHPKLIDAFTNVKEVLSDCNKGLYMKVHGMAVYEGIQSDPAWNHVFNRAMGDICTIEMKKILEKYKGFEGISLLVDVGGGIGQSLNMIISKYPSIKGINFDLPQVIQHAPFYQGIEHVEGDMFNGVPKGDVILLKAILHNWSDENCLKVLSKCYNALPQHGKVIVVDFIMPQEIQHTKADKMITSFDNLMFLDGGVERTEKEFEKLCKFSGFSSFHVVCLAFSALGVMEFYK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi474g00030 377 PIRSF O-mtase 13 377 IPR016461 GO:0008168
Vivi474g00030 377 Gene3D Vaccinia Virus protein VP39 188 365 IPR029063 -
Vivi474g00030 377 PANTHER O-METHYLTRANSFERASE 45 367 IPR016461 GO:0008168
Vivi474g00030 377 Gene3D - 44 206 IPR036388 -
Vivi474g00030 377 Pfam Dimerisation domain 48 99 IPR012967 GO:0046983
Vivi474g00030 377 SUPERFAMILY "Winged helix" DNA-binding domain 27 133 IPR036390 -
Vivi474g00030 377 FunFam Caffeic acid 3-O-methyltransferase 16 129 - -
Vivi474g00030 377 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 37 377 IPR016461 GO:0008168
Vivi474g00030 377 Pfam O-methyltransferase domain 160 358 IPR001077 GO:0008171
Vivi474g00030 377 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 375 IPR029063 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi474g00030 28 377 Monolignol Biosynthesis Gene Families AT5G54160 45.609 1.47e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi474g00030 - - mtr:11418328 634.795