Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi46g00019 ATGGAAGATAAAACTTCAACAAAGATATTTATGGAAGTTGATGAAAGACCATCATCATCATCATATGAACATGGCAAAAATAGAGATTCAGATAACAACTCATCCCTTCATAACAATACACCAGGATCTCCACTTTTATTAAGTTTGAGTCTTAATAACACAACACAACATCCTCATGAAATTCAAGGAAAGTCCCAAATCCAAATTGGGGAGCTTAGAGTAAAGCTTGAGGAAGAAAAGAAGGAGAATGAAAATTTAAAAGTTATGCTAAATCTGGTCAACGAACGATGCATTGTTCTTCATAATCGATTACTTCTGCATCAATTATCTTCATCACCTCAAAATAATCACAACTTGCCGATTGGAAATATACAAGATGAGGAGAAACCGGTGTTCCCTACTAGGCAGTTCTTGAATATTGATGAGCCTTCCTCTTCAGATTGTGGCAAAAGAGAAGGATTTGCTTCATTGGAAAACAATGAGAATGTTAACATTGGAAGAAACTTTGCATATGAGTGCATTAATAATACTCATGAAGGTGAAATAATTAGGAAAAAATTAGAGGACCAATTATCTGAGGTTGAATGCAGGAGAGCTAGAGTGTCTATAAGGGCACGATCAGATTTTTCTTTGATGGTGGATGGATGTCAATGGAGAAAATATGGACAAAAGACGGCCAAGGGAAACCCTTGTCCTCGAGCCTACTATCGTTGTAGTATGGGAACTTCATGTCCAGTTCGTAAGCAGGTGCAAAGATGTTTCAAAGATGAAAGTGTTTTCATCACAACCTACGAAGGAAACCACAACCATCAACTTCCACCAGCAGCAAAACCAATTGCAAACCTAACCTCATCAGCACTCAACACATTCCTTTCAAACTCAACCACAAATCTACAATATGGAACCAATATATCCAACACATTCCTCTTCTCTTCACCATTATCTCCACCAAACTCAAATGCTATAGCTACTTTCTCTCCATCTCCAACATGTCCTACAATAACACTTGATTTTACACTCCCTCCAAGTAACTATTTGGAGTTCAAAAACCATAAACAATCATCATTGTTTTCTTTTCCATTTCAAGGTTATAGTTACCCTCAATCATTTGAGGTGTTTCCAAATATGATAAACAATGAGAGAAAACTTGCTTTGGTTGATGTTGTGAGTGAAGCTATAGCAAAAGATCCTACTCTCAAGGCAACATTGTTTGCTGCCATGTCATCATTCACAAATGGAGATCCTTTCAATGTTAATAACCAAGGCCATCAACTTAGTAAGAGTGGTTAG 1290 0.3698 MEDKTSTKIFMEVDERPSSSSYEHGKNRDSDNNSSLHNNTPGSPLLLSLSLNNTTQHPHEIQGKSQIQIGELRVKLEEEKKENENLKVMLNLVNERCIVLHNRLLLHQLSSSPQNNHNLPIGNIQDEEKPVFPTRQFLNIDEPSSSDCGKREGFASLENNENVNIGRNFAYECINNTHEGEIIRKKLEDQLSEVECRRARVSIRARSDFSLMVDGCQWRKYGQKTAKGNPCPRAYYRCSMGTSCPVRKQVQRCFKDESVFITTYEGNHNHQLPPAAKPIANLTSSALNTFLSNSTTNLQYGTNISNTFLFSSPLSPPNSNAIATFSPSPTCPTITLDFTLPPSNYLEFKNHKQSSLFSFPFQGYSYPQSFEVFPNMINNERKLALVDVVSEAIAKDPTLKATLFAAMSSFTNGDPFNVNNQGHQLSKSG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi46g00019 429 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 64 420 IPR044810 GO:0003700
Vivi46g00019 429 MobiDBLite consensus disorder prediction 32 50 - -
Vivi46g00019 429 MobiDBLite consensus disorder prediction 1 31 - -
Vivi46g00019 429 Coils Coil 184 204 - -
Vivi46g00019 429 ProSiteProfiles WRKY domain profile. 207 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi46g00019 429 Gene3D WRKY domain 197 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi46g00019 429 SMART WRKY_cls 212 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi46g00019 429 MobiDBLite consensus disorder prediction 1 50 - -
Vivi46g00019 429 Pfam WRKY DNA -binding domain 214 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi46g00019 429 SUPERFAMILY WRKY DNA-binding domain 206 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi46g00019 429 Coils Coil 69 96 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi46g00019 185 339 WRKY Transcription Factor Family AT4G04450 56.129 5.98e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi46g00019 WRKY 9.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi46g00019 - - vvo:131599031 804.283