Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi46g00001 ATGGATGGTGTCTCTGTCAAGGTTGAGCCTGAGGAGTTTAGGGGTCTAGAATCTTCTCCTGTTGCTGTTGATGGTGTTAGTTCTAACATGGATGATGGGTCAATGGTGAATTTCTCAGCAAACAAGTCGATGGCAGCATCTCGAATGAACGAGGCGTTTCCTAGTACAAATCAGCTTACCATCTTCTATAACGGGAATATTTGTATCTATAACGGAATTCCAGCAGAAAAGATGCAAGAAATAATGCTCATGGCTTCTGCTTCTGCCAAGTCTACGGAAACGAAGAATATTGTGAAACAGTCTCCTGTTCCTTCACCTATGCCCTCAAGCCCCTCTTCTCCACTTGCCGCCACTGATAATGTTGCTTCATCGCAGGCACTCTGCTTTCCTGCAAAGAAGAGTTCCGTCTGCAGGCTGCAAGAATTTCCAATAGCACGCAGACATTCACTTCAAAGGTTTCTTGAGAAGCGGCGAGACAGGTTGGGTAGTAAAGCACCTTATCCGTCTTCGCCGATAACAAAGGTGGCTGACAACATTGAGAACAACTTCTGCTCTGAGAATTCGCCAGATTCGGTTTCGTTGAAGGGGCCAAACGAAGAATTTCAGCCAACTATATCTGCCTCTTGA 627 0.4561 MDGVSVKVEPEEFRGLESSPVAVDGVSSNMDDGSMVNFSANKSMAASRMNEAFPSTNQLTIFYNGNICIYNGIPAEKMQEIMLMASASAKSTETKNIVKQSPVPSPMPSSPSSPLAATDNVASSQALCFPAKKSSVCRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPSSPITKVADNIENNFCSENSPDSVSLKGPNEEFQPTISAS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi46g00001 208 Pfam tify domain 54 86 IPR010399 -
Vivi46g00001 208 ProSiteProfiles Tify domain profile. 52 87 IPR010399 -
Vivi46g00001 208 Pfam Jas motif 143 167 IPR018467 -
Vivi46g00001 208 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 41 175 IPR040390 -
Vivi46g00001 208 MobiDBLite consensus disorder prediction 186 208 - -
Vivi46g00001 208 SMART tify_2 52 87 IPR010399 -
Vivi46g00001 208 MobiDBLite consensus disorder prediction 95 117 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi46g00001 24 174 Tify Gene Family AT5G20900 45.806 3.78e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi46g00001 tify 1.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi46g00001 K13464 - gmx:100306045 231.106