Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi467g00045 ATGACTCACAAGAAGTTCGAACACCCTAGACACAGTTCTTTGGGAGAAATCTCAAGGAAGAGTGGTCACATAGGAAGAGGAGATACCCATGATGCTCAGACTGAGTTTGATAGGACTGAGTTAGACATAACTTGGGGTGTTACTTGTCTCCCGCGTAAGACTTACATGGGTTCGAGGAAGGTTGCTTGTATTGGTGCATGGCATCCTGCCAGAGTGGCAAATGGTAAGGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTTACCCATCTCCCCCGTAAGACTCACAGGGGTTCGAGGATGGTTGCTTGTATTGGTGCATGGCATCCTGCCAGAGTGACAAAAGGTAAGGGTTATGAAGGAGTTGTTACTCGTTGGGGTGTTACTCGTCTCCCACGTAAGACTCACATTGGTTTGAGGAAGGTTGCTTGTATTGGTGCATGGCATCCTGCCAGAGTAGCAAAAGGTAAGGGTCATGAAGGGGTTGTTACTCGTTGGCGTGTTACCCGTCTCCCCCGTAAGACTCACATGGGTTTGAGGAAGGTTGCTTGTATTGGTGCATGA 561 0.4848 MTHKKFEHPRHSSLGEISRKSGHIGRGDTHDAQTEFDRTELDITWGVTCLPRKTYMGSRKVACIGAWHPARVANGKGYEGVVTRWGVTHLPRKTHRGSRMVACIGAWHPARVTKGKGYEGVVTRWGVTRLPRKTHIGLRKVACIGAWHPARVAKGKGHEGVVTRWRVTRLPRKTHMGLRKVACIGA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi467g00045 186 SUPERFAMILY Translation proteins 112 156 IPR009000 -
Vivi467g00045 186 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 112 153 IPR045077 GO:0003735|GO:0005840|GO:0006412
Vivi467g00045 186 MobiDBLite consensus disorder prediction 1 33 - -
Vivi467g00045 186 Gene3D Ribosomal protein L3, domain 3 1 73 IPR044892 -
Vivi467g00045 186 Pfam Ribosomal protein L3 45 74 IPR000597 GO:0003735|GO:0005840|GO:0006412
Vivi467g00045 186 Pfam Ribosomal protein L3 112 153 IPR000597 GO:0003735|GO:0005840|GO:0006412
Vivi467g00045 186 SUPERFAMILY Translation proteins 74 112 IPR009000 -
Vivi467g00045 186 SUPERFAMILY Translation proteins 154 186 IPR009000 -
Vivi467g00045 186 Gene3D Ribosomal protein L3, domain 3 154 186 IPR044892 -
Vivi467g00045 186 Gene3D Ribosomal protein L3, domain 3 113 153 IPR044892 -
Vivi467g00045 186 Gene3D Ribosomal protein L3, domain 3 74 112 IPR044892 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi467g00045 45 73 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 82.759 2.19e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi467g00045 K02925 - vvo:131631790 401.749